RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 NOTCH2Q04721 2471 aa7.68□□□□□ -1.18
LRRFIP1-211ENST00000478958 PRR3P79522 188 aaKnown RBP7.67□□□□□ -1.18
LRRFIP1-211ENST00000478958 TRBV6-8A0A0A6YYG3 113 aa7.67□□□□□ -1.18
LRRFIP1-211ENST00000478958 IGHV3OR16-9A0A0B4J2B5 98 aa7.67□□□□□ -1.18
LRRFIP1-211ENST00000478958 HAMPP81172 84 aa7.67□□□□□ -1.18
LRRFIP1-211ENST00000478958 C6orf223Q8N319 242 aa7.67□□□□□ -1.18
LRRFIP1-211ENST00000478958 TM2D3Q9BRN9 247 aa7.67□□□□□ -1.18
LRRFIP1-211ENST00000478958 RNASE1P07998 156 aaKnown RBP7.66□□□□□ -1.18
LRRFIP1-211ENST00000478958 DNAJC9-AS1A6NH13 148 aa7.66□□□□□ -1.18
LRRFIP1-211ENST00000478958 TRBV7-4A0A0J9YYF1 115 aa7.65□□□□□ -1.18
LRRFIP1-211ENST00000478958 C16orf74Q96GX8 76 aa7.65□□□□□ -1.18
LRRFIP1-211ENST00000478958 DEFB113Q30KQ7 82 aa7.65□□□□□ -1.18
LRRFIP1-211ENST00000478958 TRBV6-4A0A1B0GX49 114 aa7.65□□□□□ -1.19
LRRFIP1-211ENST00000478958 FUSP35637 526 aaKnown RBP eCLIP7.65□□□□□ -1.19
LRRFIP1-211ENST00000478958 TMEM254Q8TBM7 123 aa7.65□□□□□ -1.19
LRRFIP1-211ENST00000478958 ESM1Q9NQ30 184 aa7.65□□□□□ -1.19
LRRFIP1-211ENST00000478958 LINC01547P58512 204 aaPredicted RBP7.64□□□□□ -1.19
LRRFIP1-211ENST00000478958 IGLV10-54A0A075B6I4 117 aa7.63□□□□□ -1.19
LRRFIP1-211ENST00000478958 LINC00959A0A1B0GUT2 108 aa7.63□□□□□ -1.19
LRRFIP1-211ENST00000478958 Q8N3U1 123 aa7.63□□□□□ -1.19
LRRFIP1-211ENST00000478958 UBR5O95071 2799 aaPredicted RBP7.62□□□□□ -1.19
LRRFIP1-211ENST00000478958 GYPEP15421 78 aa7.62□□□□□ -1.19
LRRFIP1-211ENST00000478958 NREPQ16612 68 aa7.62□□□□□ -1.19
LRRFIP1-211ENST00000478958 RBM12B-AS1Q9P1G2 102 aa7.62□□□□□ -1.19
LRRFIP1-211ENST00000478958 TMEM256-PLSCR3K7ERE1 68 aa7.61□□□□□ -1.19
LRRFIP1-211ENST00000478958 VWFP04275 2813 aa7.61□□□□□ -1.19
LRRFIP1-211ENST00000478958 ITPR2Q14571 2701 aa7.61□□□□□ -1.19
LRRFIP1-211ENST00000478958 C9orf116Q5BN46 136 aaPredicted RBP7.61□□□□□ -1.19
LRRFIP1-211ENST00000478958 BBC3Q96PG8 261 aaPredicted RBP7.61□□□□□ -1.19
LRRFIP1-211ENST00000478958 LRCOL1A6NCL2 159 aa7.6□□□□□ -1.19
LRRFIP1-211ENST00000478958 PRYO14603 147 aa7.6□□□□□ -1.19
LRRFIP1-211ENST00000478958 DEFB4AO15263 64 aa7.59□□□□□ -1.19
LRRFIP1-211ENST00000478958 CSNK1G2-AS1Q8NCQ2 148 aa7.59□□□□□ -1.19
LRRFIP1-211ENST00000478958 PSPHP1O15172 72 aa7.59□□□□□ -1.19
LRRFIP1-211ENST00000478958 Q6ZTC4 211 aa7.59□□□□□ -1.19
LRRFIP1-211ENST00000478958 LINC01006Q8NI28 216 aa7.59□□□□□ -1.19
LRRFIP1-211ENST00000478958 Q6ZVQ6 151 aa7.58□□□□□ -1.2
LRRFIP1-211ENST00000478958 C19orf73Q9NVV2 129 aa7.58□□□□□ -1.2
LRRFIP1-211ENST00000478958 Q1T7F1 81 aa7.58□□□□□ -1.2
LRRFIP1-211ENST00000478958 Q6ZRP5 223 aa7.57□□□□□ -1.2
LRRFIP1-211ENST00000478958 KTN1-AS1Q86SY8 53 aa7.57□□□□□ -1.2
LRRFIP1-211ENST00000478958 LINC00269Q8N2A0 174 aa7.57□□□□□ -1.2
LRRFIP1-211ENST00000478958 IGLV1-51P01701 117 aa7.57□□□□□ -1.2
LRRFIP1-211ENST00000478958 CXCL6P80162 114 aa7.57□□□□□ -1.2
LRRFIP1-211ENST00000478958 ERC2-IT1O76042 136 aa7.56□□□□□ -1.2
LRRFIP1-211ENST00000478958 C11orf45Q8TAV5 145 aa7.56□□□□□ -1.2
LRRFIP1-211ENST00000478958 KRTAP1-3Q8IUG1 177 aa7.56□□□□□ -1.2
LRRFIP1-211ENST00000478958 BPY2O14599 106 aa7.55□□□□□ -1.2
LRRFIP1-211ENST00000478958 SCXQ7RTU7 201 aa7.55□□□□□ -1.2
LRRFIP1-211ENST00000478958 Q8N814 137 aa7.55□□□□□ -1.2
LRRFIP1-211ENST00000478958 LINC00167Q96N53 147 aa7.55□□□□□ -1.2
LRRFIP1-211ENST00000478958 Q6ZQT0 140 aa7.55□□□□□ -1.2
LRRFIP1-211ENST00000478958 hDV103S1A0JD37 113 aa7.54□□□□□ -1.2
LRRFIP1-211ENST00000478958 ANGP03950 147 aaKnown RBP7.54□□□□□ -1.2
LRRFIP1-211ENST00000478958 NANOS2P60321 138 aaKnown RBP7.54□□□□□ -1.2
LRRFIP1-211ENST00000478958 C6orf99Q4VX62 202 aa7.54□□□□□ -1.2
LRRFIP1-211ENST00000478958 Q8IZM0 81 aa7.53□□□□□ -1.2
LRRFIP1-211ENST00000478958 M0R2N4 97 aa7.53□□□□□ -1.2
LRRFIP1-211ENST00000478958 APOC4P55056 127 aa7.53□□□□□ -1.2
LRRFIP1-211ENST00000478958 ZNF843Q8N446 348 aa7.53□□□□□ -1.2
LRRFIP1-211ENST00000478958 Q8NDZ9 215 aa7.53□□□□□ -1.2
LRRFIP1-211ENST00000478958 LY6G6DO95868 133 aa7.52□□□□□ -1.21
LRRFIP1-211ENST00000478958 CMC4P56277 68 aaPredicted RBP7.52□□□□□ -1.21
LRRFIP1-211ENST00000478958 CHCHD10Q8WYQ3 142 aaPredicted RBP7.52□□□□□ -1.21
LRRFIP1-211ENST00000478958 FASNP49327 2511 aaKnown RBP7.52□□□□□ -1.21
LRRFIP1-211ENST00000478958 TRAV22A0A0B4J277 110 aa7.51□□□□□ -1.21
LRRFIP1-211ENST00000478958 UBE2BP63146 152 aa7.51□□□□□ -1.21
LRRFIP1-211ENST00000478958 HTN3P15516 51 aa7.51□□□□□ -1.21
LRRFIP1-211ENST00000478958 HIGD2AQ9BW72 106 aa7.51□□□□□ -1.21
LRRFIP1-211ENST00000478958 PRO0255Q9UI72 69 aa7.51□□□□□ -1.21
LRRFIP1-211ENST00000478958 LOC110117498A0A087WWA1 95 aa7.5□□□□□ -1.21
LRRFIP1-211ENST00000478958 M0R378 163 aa7.5□□□□□ -1.21
LRRFIP1-211ENST00000478958 LINC00588Q9Y4M8 146 aa7.5□□□□□ -1.21
LRRFIP1-211ENST00000478958 TENM4Q6N022 2769 aa7.5□□□□□ -1.21
LRRFIP1-211ENST00000478958 REG3AQ06141 175 aa7.49□□□□□ -1.21
LRRFIP1-211ENST00000478958 KIAA0087Q14695 138 aa7.49□□□□□ -1.21
LRRFIP1-211ENST00000478958 DEFB135Q30KP9 77 aa7.49□□□□□ -1.21
LRRFIP1-211ENST00000478958 C10orf25Q5T742 122 aa7.49□□□□□ -1.21
LRRFIP1-211ENST00000478958 A0A1B0GUV1 79 aa7.49□□□□□ -1.21
LRRFIP1-211ENST00000478958 A8MU10 97 aa7.49□□□□□ -1.21
LRRFIP1-211ENST00000478958 UNQ6190/PRO20217Q6UXQ8 127 aa7.49□□□□□ -1.21
LRRFIP1-211ENST00000478958 C1orf64Q8NEQ6 169 aa7.49□□□□□ -1.21
LRRFIP1-211ENST00000478958 LYRM9A8MSI8 78 aa7.48□□□□□ -1.21
LRRFIP1-211ENST00000478958 SYCNQ0VAF6 134 aa7.48□□□□□ -1.21
LRRFIP1-211ENST00000478958 CD164L2Q6UWJ8 174 aa7.48□□□□□ -1.21
LRRFIP1-211ENST00000478958 ATRQ13535 2644 aa7.48□□□□□ -1.21
LRRFIP1-211ENST00000478958 UNC79Q9P2D8 2635 aa7.48□□□□□ -1.21
LRRFIP1-211ENST00000478958 SPATA3Q8NHX4 192 aa7.48□□□□□ -1.21
LRRFIP1-211ENST00000478958 X6R8D5 127 aa7.48□□□□□ -1.21
LRRFIP1-211ENST00000478958 TRRAPQ9Y4A5 3859 aa7.48□□□□□ -1.21
LRRFIP1-211ENST00000478958 HELZ2Q9BYK8 2649 aaKnown RBP7.47□□□□□ -1.21
LRRFIP1-211ENST00000478958 ANK3Q12955 4377 aaKnown RBP7.47□□□□□ -1.21
LRRFIP1-211ENST00000478958 A8MUN3 132 aa7.47□□□□□ -1.21
LRRFIP1-211ENST00000478958 TENM1Q9UKZ4 2725 aa7.47□□□□□ -1.21
LRRFIP1-211ENST00000478958 SPTSSBQ8NFR3 76 aa7.46□□□□□ -1.21
LRRFIP1-211ENST00000478958 XAGE1AQ9HD64 81 aa7.46□□□□□ -1.22
LRRFIP1-211ENST00000478958 TEP1Q99973 2627 aaKnown RBP7.46□□□□□ -1.22
LRRFIP1-211ENST00000478958 HECTD1Q9ULT8 2610 aa7.46□□□□□ -1.22
LRRFIP1-211ENST00000478958 NDUFS5O43920 106 aa7.45□□□□□ -1.22
LRRFIP1-211ENST00000478958 OCR1Q9BZK8 76 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms