RNA–Protein interactions for RNA: ENST00000478082.5

PLOD3-212, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 1,585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-212ENST00000478082 PLNP26678 52 aa11.54□□□□□ -0.56
PLOD3-212ENST00000478082 PRO1933Q9H354 126 aa11.52□□□□□ -0.57
PLOD3-212ENST00000478082 C22orf24Q9Y442 160 aa11.51□□□□□ -0.57
PLOD3-212ENST00000478082 A0A0U1RRA0 63 aa11.5□□□□□ -0.57
PLOD3-212ENST00000478082 C3orf79P0CE67 100 aa11.5□□□□□ -0.57
PLOD3-212ENST00000478082 SND1-IT1Q9HBX3 110 aa11.5□□□□□ -0.57
PLOD3-212ENST00000478082 C1orf137Q5JT78 98 aa11.49□□□□□ -0.57
PLOD3-212ENST00000478082 LINC01545Q5VT33 79 aa11.49□□□□□ -0.57
PLOD3-212ENST00000478082 LEPROTO15243 131 aa11.48□□□□□ -0.57
PLOD3-212ENST00000478082 UBE2BP63146 152 aa11.48□□□□□ -0.57
PLOD3-212ENST00000478082 Q8NDZ9 215 aa11.48□□□□□ -0.57
PLOD3-212ENST00000478082 NDUFA12Q9UI09 145 aa11.48□□□□□ -0.57
PLOD3-212ENST00000478082 KRTAP29-1A8MX34 341 aaPredicted RBP11.46□□□□□ -0.57
PLOD3-212ENST00000478082 SMIM13P0DJ93 91 aa11.46□□□□□ -0.57
PLOD3-212ENST00000478082 LINC00158P58513 81 aa11.46□□□□□ -0.57
PLOD3-212ENST00000478082 KRTDAPP60985 99 aa11.46□□□□□ -0.57
PLOD3-212ENST00000478082 COX17Q14061 63 aa11.46□□□□□ -0.57
PLOD3-212ENST00000478082 SFTA2Q6UW10 78 aa11.46□□□□□ -0.57
PLOD3-212ENST00000478082 SRSF9Q13242 221 aaKnown RBP eCLIP11.45□□□□□ -0.58
PLOD3-212ENST00000478082 PET117Q6UWS5 81 aa11.45□□□□□ -0.58
PLOD3-212ENST00000478082 HERC1Q15751 4861 aa11.45□□□□□ -0.58
PLOD3-212ENST00000478082 A0A1B0GV90 55 aa11.45□□□□□ -0.58
PLOD3-212ENST00000478082 GAGE10A6NGK3 116 aa11.45□□□□□ -0.58
PLOD3-212ENST00000478082 J3QQQ9 107 aa11.45□□□□□ -0.58
PLOD3-212ENST00000478082 MRPL55Q7Z7F7 128 aaKnown RBP11.45□□□□□ -0.58
PLOD3-212ENST00000478082 PLA2G2DQ9UNK4 145 aa11.45□□□□□ -0.58
PLOD3-212ENST00000478082 SCGB1D1O95968 90 aa11.44□□□□□ -0.58
PLOD3-212ENST00000478082 HERVK_113P61574 105 aa11.44□□□□□ -0.58
PLOD3-212ENST00000478082 MEIG1Q5JSS6 88 aa11.44□□□□□ -0.58
PLOD3-212ENST00000478082 PLEKHB2Q96CS7 222 aa11.44□□□□□ -0.58
PLOD3-212ENST00000478082 M0R143 59 aa11.43□□□□□ -0.58
PLOD3-212ENST00000478082 LINC00167Q96N53 147 aa11.43□□□□□ -0.58
PLOD3-212ENST00000478082 IGLV5-37A0A075B6J1 123 aa11.42□□□□□ -0.58
PLOD3-212ENST00000478082 MYMXA0A1B0GTQ4 84 aa11.42□□□□□ -0.58
PLOD3-212ENST00000478082 RPL37AP8A6NKH3 93 aa11.42□□□□□ -0.58
PLOD3-212ENST00000478082 VPREB1P12018 145 aa11.42□□□□□ -0.58
PLOD3-212ENST00000478082 TP73-AS1Q9UF72 201 aa11.42□□□□□ -0.58
PLOD3-212ENST00000478082 E9PLD3 99 aa11.41□□□□□ -0.58
PLOD3-212ENST00000478082 J3QL48 77 aa11.41□□□□□ -0.58
PLOD3-212ENST00000478082 HERV-K104P63124 156 aa11.41□□□□□ -0.58
PLOD3-212ENST00000478082 IGLV7-43P04211 117 aa11.41□□□□□ -0.58
PLOD3-212ENST00000478082 SPINK6Q6UWN8 80 aa11.41□□□□□ -0.58
PLOD3-212ENST00000478082 MIR7-3HGQ8N6C7 128 aa11.41□□□□□ -0.58
PLOD3-212ENST00000478082 DMBT1Q9UGM3 2413 aaPredicted RBP11.4□□□□□ -0.58
PLOD3-212ENST00000478082 LGALS3P17931 250 aaKnown RBP11.4□□□□□ -0.58
PLOD3-212ENST00000478082 DAND5Q8N907 189 aa11.4□□□□□ -0.58
PLOD3-212ENST00000478082 IGKV2D-26A0A0A0MRZ7 120 aa11.39□□□□□ -0.59
PLOD3-212ENST00000478082 OXTP01178 125 aa11.39□□□□□ -0.59
PLOD3-212ENST00000478082 NKAPP1Q8N9T2 125 aa11.39□□□□□ -0.59
PLOD3-212ENST00000478082 ATOH7Q8N100 152 aa11.38□□□□□ -0.59
PLOD3-212ENST00000478082 MIEN1Q9BRT3 115 aa11.38□□□□□ -0.59
PLOD3-212ENST00000478082 TNXBP22105 4242 aa11.37□□□□□ -0.59
PLOD3-212ENST00000478082 TTTY13Q9BZ97 58 aa11.37□□□□□ -0.59
PLOD3-212ENST00000478082 IGKV2-28A0A075B6P5 120 aa11.37□□□□□ -0.59
PLOD3-212ENST00000478082 IGKV2D-28P01615 120 aa11.37□□□□□ -0.59
PLOD3-212ENST00000478082 SNHG12Q9BXW3 62 aa11.37□□□□□ -0.59
PLOD3-212ENST00000478082 MT1HL1P0DM35 61 aa11.36□□□□□ -0.59
PLOD3-212ENST00000478082 NMUP48645 174 aa11.36□□□□□ -0.59
PLOD3-212ENST00000478082 VAMP8Q9BV40 100 aa11.36□□□□□ -0.59
PLOD3-212ENST00000478082 A0A0J9YXY3 114 aa11.34□□□□□ -0.59
PLOD3-212ENST00000478082 RPL24P83731 157 aaKnown RBP11.33□□□□□ -0.6
PLOD3-212ENST00000478082 BOD1L2Q8IYS8 172 aa11.33□□□□□ -0.6
PLOD3-212ENST00000478082 ANKRD39Q53RE8 183 aa11.33□□□□□ -0.6
PLOD3-212ENST00000478082 ADAMTSL4-AS1Q5T5F5 129 aa11.33□□□□□ -0.6
PLOD3-212ENST00000478082 IGLV1-50A0A075B6I6 118 aa11.32□□□□□ -0.6
PLOD3-212ENST00000478082 C20orf202A1L168 122 aa11.32□□□□□ -0.6
PLOD3-212ENST00000478082 EIF4EBP3O60516 100 aaPredicted RBP11.32□□□□□ -0.6
PLOD3-212ENST00000478082 TMEM238C9JI98 176 aa11.31□□□□□ -0.6
PLOD3-212ENST00000478082 NCR3O14931 201 aa11.31□□□□□ -0.6
PLOD3-212ENST00000478082 BCE1O60756 84 aa11.3□□□□□ -0.6
PLOD3-212ENST00000478082 NPC2P61916 151 aa11.3□□□□□ -0.6
PLOD3-212ENST00000478082 LINC01600Q96MT4 127 aa11.3□□□□□ -0.6
PLOD3-212ENST00000478082 H0Y9J4 135 aa11.29□□□□□ -0.6
PLOD3-212ENST00000478082 SOSTDC1Q6X4U4 206 aa11.29□□□□□ -0.6
PLOD3-212ENST00000478082 ZNF815PA8K554 130 aa11.28□□□□□ -0.6
PLOD3-212ENST00000478082 ZNF861PO60384 105 aa11.28□□□□□ -0.6
PLOD3-212ENST00000478082 REG3GQ6UW15 175 aa11.28□□□□□ -0.6
PLOD3-212ENST00000478082 LITAFQ99732 161 aa11.28□□□□□ -0.6
PLOD3-212ENST00000478082 UQCR10Q9UDW1 63 aa11.28□□□□□ -0.6
PLOD3-212ENST00000478082 DIRC1Q969H9 104 aa11.28□□□□□ -0.6
PLOD3-212ENST00000478082 LOC107984156A0A0G2JMH3 177 aa11.26□□□□□ -0.61
PLOD3-212ENST00000478082 M0R378 163 aa11.26□□□□□ -0.61
PLOD3-212ENST00000478082 ARL17AQ8IVW1 177 aa11.26□□□□□ -0.61
PLOD3-212ENST00000478082 TMEM126AQ9H061 195 aa11.26□□□□□ -0.61
PLOD3-212ENST00000478082 PAM16Q9Y3D7 125 aa11.26□□□□□ -0.61
PLOD3-212ENST00000478082 SPATA45Q537H7 98 aa11.24□□□□□ -0.61
PLOD3-212ENST00000478082 COL5A1-AS1Q5SY13 56 aa11.24□□□□□ -0.61
PLOD3-212ENST00000478082 KRTAP13-1Q8IUC0 172 aa11.24□□□□□ -0.61
PLOD3-212ENST00000478082 PCP2Q8IVA1 136 aa11.24□□□□□ -0.61
PLOD3-212ENST00000478082 DLEU1O43261 78 aa11.24□□□□□ -0.61
PLOD3-212ENST00000478082 KRTAP1-4P0C5Y4 121 aa11.24□□□□□ -0.61
PLOD3-212ENST00000478082 PRLHP81277 87 aa11.24□□□□□ -0.61
PLOD3-212ENST00000478082 KRTAP10-8P60410 259 aa11.22□□□□□ -0.61
PLOD3-212ENST00000478082 TRBV10-3A0A0K0K1G6 114 aa11.21□□□□□ -0.61
PLOD3-212ENST00000478082 RPL28P46779 137 aaKnown RBP11.21□□□□□ -0.61
PLOD3-212ENST00000478082 UBE2AP49459 152 aa11.21□□□□□ -0.61
PLOD3-212ENST00000478082 FAM19A1Q7Z5A9 133 aa11.21□□□□□ -0.61
PLOD3-212ENST00000478082 TIMM17BO60830 172 aa11.2□□□□□ -0.62
PLOD3-212ENST00000478082 PRR26Q8N8Z3 221 aa11.2□□□□□ -0.62
PLOD3-212ENST00000478082 LINC00308Q8TCZ7 52 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms