RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 C11orf86A6NJI1 115 aa5.02□□□□□ -1.61
ERCC8-205ENST00000477893 H0Y8G0 127 aa5.02□□□□□ -1.61
ERCC8-205ENST00000477893 SCO1O75880 301 aa5.02□□□□□ -1.61
ERCC8-205ENST00000477893 KRTAP10-8P60410 259 aa5.02□□□□□ -1.61
ERCC8-205ENST00000477893 LBHQ53QV2 105 aaPredicted RBP5.02□□□□□ -1.61
ERCC8-205ENST00000477893 MRPL55Q7Z7F7 128 aaKnown RBP5.02□□□□□ -1.61
ERCC8-205ENST00000477893 SLC7A5P1Q8MH63 180 aa5.02□□□□□ -1.61
ERCC8-205ENST00000477893 YPEL4Q96NS1 127 aa5.02□□□□□ -1.61
ERCC8-205ENST00000477893 CHTOPQ9Y3Y2 248 aaKnown RBP5.02□□□□□ -1.61
ERCC8-205ENST00000477893 LRP2P98164 4655 aa5.01□□□□□ -1.61
ERCC8-205ENST00000477893 FAM19A2Q8N3H0 131 aa5.01□□□□□ -1.61
ERCC8-205ENST00000477893 NKAPP1Q8N9T2 125 aa5.01□□□□□ -1.61
ERCC8-205ENST00000477893 IGKV2-28A0A075B6P5 120 aa5□□□□□ -1.61
ERCC8-205ENST00000477893 IGLV5-39A0A0G2JS06 123 aa5□□□□□ -1.61
ERCC8-205ENST00000477893 A0A0U1RRA0 63 aa5□□□□□ -1.61
ERCC8-205ENST00000477893 IGKV2D-28P01615 120 aa5□□□□□ -1.61
ERCC8-205ENST00000477893 CHCHD1Q96BP2 118 aaKnown RBP5□□□□□ -1.61
ERCC8-205ENST00000477893 LINC00167Q96N53 147 aa5□□□□□ -1.61
ERCC8-205ENST00000477893 ERG28Q9UKR5 140 aa5□□□□□ -1.61
ERCC8-205ENST00000477893 NUPR1O60356 82 aa4.99□□□□□ -1.61
ERCC8-205ENST00000477893 HSBP1O75506 76 aa4.99□□□□□ -1.61
ERCC8-205ENST00000477893 TRGC2P03986 189 aa4.99□□□□□ -1.61
ERCC8-205ENST00000477893 IFI27L1Q96BM0 104 aa4.99□□□□□ -1.61
ERCC8-205ENST00000477893 ZNF861PO60384 105 aa4.98□□□□□ -1.61
ERCC8-205ENST00000477893 BCE1O60756 84 aa4.98□□□□□ -1.61
ERCC8-205ENST00000477893 SND1-IT1Q9HBX3 110 aa4.98□□□□□ -1.61
ERCC8-205ENST00000477893 TP73-AS1Q9UF72 201 aa4.98□□□□□ -1.61
ERCC8-205ENST00000477893 TMEM223A0PJW6 202 aa4.97□□□□□ -1.61
ERCC8-205ENST00000477893 SERF1AO75920 110 aa4.97□□□□□ -1.61
ERCC8-205ENST00000477893 KRTAP1-4P0C5Y4 121 aa4.97□□□□□ -1.61
ERCC8-205ENST00000477893 UBE2AP49459 152 aa4.97□□□□□ -1.61
ERCC8-205ENST00000477893 LINC00158P58513 81 aa4.97□□□□□ -1.61
ERCC8-205ENST00000477893 TRAV12-1A0A0B4J245 112 aa4.96□□□□□ -1.62
ERCC8-205ENST00000477893 TMEM238C9JI98 176 aa4.96□□□□□ -1.62
ERCC8-205ENST00000477893 FABP4P15090 132 aa4.96□□□□□ -1.62
ERCC8-205ENST00000477893 RPL28P46779 137 aaKnown RBP4.96□□□□□ -1.62
ERCC8-205ENST00000477893 MEIG1Q5JSS6 88 aa4.96□□□□□ -1.62
ERCC8-205ENST00000477893 Q8NDZ9 215 aa4.96□□□□□ -1.62
ERCC8-205ENST00000477893 IGLV1-50A0A075B6I6 118 aa4.95□□□□□ -1.62
ERCC8-205ENST00000477893 IGLV5-37A0A075B6J1 123 aa4.95□□□□□ -1.62
ERCC8-205ENST00000477893 LEPROTL1O95214 131 aa4.95□□□□□ -1.62
ERCC8-205ENST00000477893 SMIM13P0DJ93 91 aa4.95□□□□□ -1.62
ERCC8-205ENST00000477893 VPREB1P12018 145 aa4.95□□□□□ -1.62
ERCC8-205ENST00000477893 PRLHP81277 87 aa4.95□□□□□ -1.62
ERCC8-205ENST00000477893 PMCHL2Q9BQD1 86 aa4.95□□□□□ -1.62
ERCC8-205ENST00000477893 ANAPC11Q9NYG5 84 aa4.95□□□□□ -1.62
ERCC8-205ENST00000477893 ATP6V1G1O75348 118 aa4.94□□□□□ -1.62
ERCC8-205ENST00000477893 RPL24P83731 157 aaKnown RBP4.94□□□□□ -1.62
ERCC8-205ENST00000477893 COX17Q14061 63 aa4.94□□□□□ -1.62
ERCC8-205ENST00000477893 FAM19A1Q7Z5A9 133 aa4.94□□□□□ -1.62
ERCC8-205ENST00000477893 LPAP08519 4548 aa4.93□□□□□ -1.62
ERCC8-205ENST00000477893 A0A087X002 238 aa4.93□□□□□ -1.62
ERCC8-205ENST00000477893 COLCA2A8K830 154 aa4.93□□□□□ -1.62
ERCC8-205ENST00000477893 NCR3O14931 201 aa4.93□□□□□ -1.62
ERCC8-205ENST00000477893 TSPAN13O95857 204 aa4.93□□□□□ -1.62
ERCC8-205ENST00000477893 RPL13AP40429 203 aaKnown RBP4.93□□□□□ -1.62
ERCC8-205ENST00000477893 TSPEAR-AS2P59090 65 aa4.93□□□□□ -1.62
ERCC8-205ENST00000477893 SFTA2Q6UW10 78 aa4.93□□□□□ -1.62
ERCC8-205ENST00000477893 TMEM126AQ9H061 195 aa4.93□□□□□ -1.62
ERCC8-205ENST00000477893 BOD1L2Q8IYS8 172 aa4.92□□□□□ -1.62
ERCC8-205ENST00000477893 MIR7-3HGQ8N6C7 128 aa4.92□□□□□ -1.62
ERCC8-205ENST00000477893 DAND5Q8N907 189 aa4.92□□□□□ -1.62
ERCC8-205ENST00000477893 NDUFA12Q9UI09 145 aa4.92□□□□□ -1.62
ERCC8-205ENST00000477893 HSPB8Q9UJY1 196 aa4.92□□□□□ -1.62
ERCC8-205ENST00000477893 M0R378 163 aa4.91□□□□□ -1.62
ERCC8-205ENST00000477893 DPM2O94777 84 aa4.91□□□□□ -1.62
ERCC8-205ENST00000477893 PLNP26678 52 aa4.91□□□□□ -1.62
ERCC8-205ENST00000477893 KRTAP13-1Q8IUC0 172 aa4.91□□□□□ -1.62
ERCC8-205ENST00000477893 RNF213Q63HN8 5207 aa4.91□□□□□ -1.62
ERCC8-205ENST00000477893 MYMXA0A1B0GTQ4 84 aa4.9□□□□□ -1.63
ERCC8-205ENST00000477893 LEPROTO15243 131 aa4.9□□□□□ -1.63
ERCC8-205ENST00000477893 CRYGAP11844 174 aa4.9□□□□□ -1.63
ERCC8-205ENST00000477893 PRR4Q16378 134 aa4.9□□□□□ -1.63
ERCC8-205ENST00000477893 TYMSOSQ8TAI1 123 aa4.9□□□□□ -1.63
ERCC8-205ENST00000477893 HIGD2AQ9BW72 106 aa4.9□□□□□ -1.63
ERCC8-205ENST00000477893 IGKCP01834 107 aa4.89□□□□□ -1.63
ERCC8-205ENST00000477893 LGALS3P17931 250 aaKnown RBP4.89□□□□□ -1.63
ERCC8-205ENST00000477893 HERVK_113P61574 105 aa4.89□□□□□ -1.63
ERCC8-205ENST00000477893 HERV-K104P63124 156 aa4.89□□□□□ -1.63
ERCC8-205ENST00000477893 PLEKHB2Q96CS7 222 aa4.89□□□□□ -1.63
ERCC8-205ENST00000477893 MAP1LC3CQ9BXW4 147 aa4.89□□□□□ -1.63
ERCC8-205ENST00000477893 J3QQQ9 107 aa4.88□□□□□ -1.63
ERCC8-205ENST00000477893 NPC2P61916 151 aa4.88□□□□□ -1.63
ERCC8-205ENST00000477893 KRTAP13-2Q52LG2 175 aa4.88□□□□□ -1.63
ERCC8-205ENST00000477893 HIST1H2BKO60814 126 aa4.87□□□□□ -1.63
ERCC8-205ENST00000477893 HIST1H2BJP06899 126 aa4.87□□□□□ -1.63
ERCC8-205ENST00000477893 HIST1H2BOP23527 126 aa4.87□□□□□ -1.63
ERCC8-205ENST00000477893 HIST1H2BBP33778 126 aa4.87□□□□□ -1.63
ERCC8-205ENST00000477893 HIST1H2BDP58876 126 aa4.87□□□□□ -1.63
ERCC8-205ENST00000477893 HIST1H2BCP62807 126 aa4.87□□□□□ -1.63
ERCC8-205ENST00000477893 HIST2H2BEQ16778 126 aa4.87□□□□□ -1.63
ERCC8-205ENST00000477893 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.87□□□□□ -1.63
ERCC8-205ENST00000477893 HIST1H2BHQ93079 126 aa4.87□□□□□ -1.63
ERCC8-205ENST00000477893 HIST1H2BNQ99877 126 aa4.87□□□□□ -1.63
ERCC8-205ENST00000477893 HIST1H2BMQ99879 126 aa4.87□□□□□ -1.63
ERCC8-205ENST00000477893 IGKV2D-26A0A0A0MRZ7 120 aa4.86□□□□□ -1.63
ERCC8-205ENST00000477893 TRBV10-3A0A0K0K1G6 114 aa4.86□□□□□ -1.63
ERCC8-205ENST00000477893 LINC00587B1AMM8 73 aa4.86□□□□□ -1.63
ERCC8-205ENST00000477893 RETNLBQ9BQ08 111 aa4.86□□□□□ -1.63
ERCC8-205ENST00000477893 MIEN1Q9BRT3 115 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms