RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 RPL18AQ02543 176 aaKnown RBP18.68■□□□□ 0.58
VEGFA-211ENST00000476772 Q8N814 137 aa18.68■□□□□ 0.58
VEGFA-211ENST00000476772 PGPEP1Q9NXJ5 209 aa18.68■□□□□ 0.58
VEGFA-211ENST00000476772 HYDINQ4G0P3 5121 aa18.68■□□□□ 0.58
VEGFA-211ENST00000476772 IGKV2-28A0A075B6P5 120 aa18.67■□□□□ 0.58
VEGFA-211ENST00000476772 C9orf118A6NHY6 69 aa18.67■□□□□ 0.58
VEGFA-211ENST00000476772 IGKV2D-28P01615 120 aa18.67■□□□□ 0.58
VEGFA-211ENST00000476772 Q8NDZ9 215 aa18.67■□□□□ 0.58
VEGFA-211ENST00000476772 A0A1B0GV90 55 aa18.66■□□□□ 0.58
VEGFA-211ENST00000476772 H3BUT2 72 aa18.64■□□□□ 0.57
VEGFA-211ENST00000476772 TSPAN13O95857 204 aa18.64■□□□□ 0.57
VEGFA-211ENST00000476772 NDUFC2O95298 119 aa18.63■□□□□ 0.57
VEGFA-211ENST00000476772 H7C2G1 150 aa18.63■□□□□ 0.57
VEGFA-211ENST00000476772 DNAH17Q9UFH2 4485 aa18.63■□□□□ 0.57
VEGFA-211ENST00000476772 SACSQ9NZJ4 4579 aa18.62■□□□□ 0.57
VEGFA-211ENST00000476772 LOC107984640A0A0U1RRK4 108 aa18.62■□□□□ 0.57
VEGFA-211ENST00000476772 RPL13AP40429 203 aaKnown RBP18.62■□□□□ 0.57
VEGFA-211ENST00000476772 PRR3P79522 188 aaKnown RBP18.62■□□□□ 0.57
VEGFA-211ENST00000476772 LINC00337Q8N6G1 96 aa18.62■□□□□ 0.57
VEGFA-211ENST00000476772 C9orf129Q5T035 196 aaKnown RBP18.6■□□□□ 0.57
VEGFA-211ENST00000476772 LCE6AA0A183 80 aa18.6■□□□□ 0.57
VEGFA-211ENST00000476772 GAGE2BQ13066 116 aa18.59■□□□□ 0.57
VEGFA-211ENST00000476772 TRAV13-2A0A0B4J235 113 aa18.58■□□□□ 0.57
VEGFA-211ENST00000476772 RTL8CO15255 209 aa18.57■□□□□ 0.56
VEGFA-211ENST00000476772 Q1RN00 199 aa18.57■□□□□ 0.56
VEGFA-211ENST00000476772 NCR3O14931 201 aa18.57■□□□□ 0.56
VEGFA-211ENST00000476772 TNP2Q05952 138 aa18.56■□□□□ 0.56
VEGFA-211ENST00000476772 C9orf163Q8N9P6 203 aa18.56■□□□□ 0.56
VEGFA-211ENST00000476772 FRAS1Q86XX4 4008 aa18.55■□□□□ 0.56
VEGFA-211ENST00000476772 A0A1W2PPM0 123 aa18.54■□□□□ 0.56
VEGFA-211ENST00000476772 VPREB1P12018 145 aa18.54■□□□□ 0.56
VEGFA-211ENST00000476772 LINC01620Q4KN68 170 aa18.52■□□□□ 0.56
VEGFA-211ENST00000476772 OR13C6PQ8NH95 151 aa18.52■□□□□ 0.56
VEGFA-211ENST00000476772 A0A096LNI7 61 aa18.5■□□□□ 0.55
VEGFA-211ENST00000476772 FUSP35637 526 aaKnown RBP eCLIP18.5■□□□□ 0.555e-16■□□□□ 9.4
VEGFA-211ENST00000476772 C16orf90A8MZG2 172 aa18.49■□□□□ 0.55
VEGFA-211ENST00000476772 PSMB2P49721 201 aa18.48■□□□□ 0.55
VEGFA-211ENST00000476772 SERTAD4-AS1Q5TG53 156 aa18.48■□□□□ 0.55
VEGFA-211ENST00000476772 TRBV10-2A0A0K0K1G8 114 aa18.47■□□□□ 0.55
VEGFA-211ENST00000476772 FABP2P12104 132 aa18.47■□□□□ 0.55
VEGFA-211ENST00000476772 VAMP3Q15836 100 aa18.47■□□□□ 0.55
VEGFA-211ENST00000476772 IGKV2-24A0A0C4DH68 120 aa18.47■□□□□ 0.55
VEGFA-211ENST00000476772 FAM168BA1KXE4 195 aa18.46■□□□□ 0.55
VEGFA-211ENST00000476772 TRIAP1O43715 76 aa18.45■□□□□ 0.54
VEGFA-211ENST00000476772 PLA2G2DQ9UNK4 145 aa18.45■□□□□ 0.54
VEGFA-211ENST00000476772 S100A7L2Q5SY68 101 aa18.44■□□□□ 0.54
VEGFA-211ENST00000476772 SDIM1Q6ZPB5 146 aa18.44■□□□□ 0.54
VEGFA-211ENST00000476772 TMEM126AQ9H061 195 aa18.44■□□□□ 0.54
VEGFA-211ENST00000476772 PKIGQ9Y2B9 76 aa18.44■□□□□ 0.54
VEGFA-211ENST00000476772 SMIM11BQ8TCY0 68 aa18.43■□□□□ 0.54
VEGFA-211ENST00000476772 HECTD4Q9Y4D8 3996 aa18.42■□□□□ 0.54
VEGFA-211ENST00000476772 M0R378 163 aa18.41■□□□□ 0.54
VEGFA-211ENST00000476772 CHTF8P0CG12 524 aa18.41■□□□□ 0.54
VEGFA-211ENST00000476772 KRTAP7-1Q8IUC3 87 aa18.41■□□□□ 0.54
VEGFA-211ENST00000476772 SPCS1Q9Y6A9 102 aa18.41■□□□□ 0.54
VEGFA-211ENST00000476772 IGLV5-52A0A0A0MRZ9 124 aa18.4■□□□□ 0.54
VEGFA-211ENST00000476772 IGLV6-57P01721 117 aa18.4■□□□□ 0.54
VEGFA-211ENST00000476772 SCGB1C2P0DMR2 95 aa18.4■□□□□ 0.54
VEGFA-211ENST00000476772 NKAPP1Q8N9T2 125 aa18.4■□□□□ 0.54
VEGFA-211ENST00000476772 FAT2Q9NYQ8 4349 aa18.39■□□□□ 0.54
VEGFA-211ENST00000476772 RPL28P46779 137 aaKnown RBP18.39■□□□□ 0.53
VEGFA-211ENST00000476772 FAM19A5Q7Z5A7 132 aaPredicted RBP18.39■□□□□ 0.53
VEGFA-211ENST00000476772 TRBV10-3A0A0K0K1G6 114 aa18.38■□□□□ 0.53
VEGFA-211ENST00000476772 IGLV5-37A0A075B6J1 123 aa18.38■□□□□ 0.53
VEGFA-211ENST00000476772 LYRM7Q5U5X0 104 aa18.38■□□□□ 0.53
VEGFA-211ENST00000476772 DNAH11Q96DT5 4516 aa18.37■□□□□ 0.53
VEGFA-211ENST00000476772 K7EP34 96 aa18.36■□□□□ 0.53
VEGFA-211ENST00000476772 GAGE10A6NGK3 116 aa18.34■□□□□ 0.53
VEGFA-211ENST00000476772 COX6CP09669 75 aa18.34■□□□□ 0.53
VEGFA-211ENST00000476772 A0A1W2PNN7 141 aa18.34■□□□□ 0.53
VEGFA-211ENST00000476772 C7orf33Q8WU49 177 aa18.34■□□□□ 0.53
VEGFA-211ENST00000476772 KRTAP10-2P60368 255 aa18.33■□□□□ 0.52
VEGFA-211ENST00000476772 C22orf24Q9Y442 160 aa18.33■□□□□ 0.52
VEGFA-211ENST00000476772 PANO1I0J062 215 aa18.32■□□□□ 0.52
VEGFA-211ENST00000476772 TCL1BO95988 128 aa18.31■□□□□ 0.52
VEGFA-211ENST00000476772 LINC00474Q9P2X8 69 aa18.31■□□□□ 0.52
VEGFA-211ENST00000476772 RYR2Q92736 4967 aa18.31■□□□□ 0.52
VEGFA-211ENST00000476772 GTF2H5Q6ZYL4 71 aa18.31■□□□□ 0.52
VEGFA-211ENST00000476772 TRAV23DV6A0A075B6W5 121 aa18.28■□□□□ 0.52
VEGFA-211ENST00000476772 CLEC2BQ92478 149 aa18.28■□□□□ 0.52
VEGFA-211ENST00000476772 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP18.28■□□□□ 0.52
VEGFA-211ENST00000476772 KMT2CQ8NEZ4 4911 aaKnown RBP18.28■□□□□ 0.52
VEGFA-211ENST00000476772 UBE2V1Q13404 147 aa18.28■□□□□ 0.52
VEGFA-211ENST00000476772 MRPL55Q7Z7F7 128 aaKnown RBP18.28■□□□□ 0.52
VEGFA-211ENST00000476772 M0QXV9 152 aa18.27■□□□□ 0.52
VEGFA-211ENST00000476772 SPACA4Q8TDM5 124 aa18.27■□□□□ 0.52
VEGFA-211ENST00000476772 TRBV20-1A0A075B6N2 111 aa18.26■□□□□ 0.51
VEGFA-211ENST00000476772 C6orf99Q4VX62 202 aa18.26■□□□□ 0.51
VEGFA-211ENST00000476772 LINC00167Q96N53 147 aa18.26■□□□□ 0.51
VEGFA-211ENST00000476772 DNAH5Q8TE73 4624 aa18.26■□□□□ 0.51
VEGFA-211ENST00000476772 H3BMG7 143 aa18.25■□□□□ 0.51
VEGFA-211ENST00000476772 RPL37AP8A6NKH3 93 aa18.24■□□□□ 0.51
VEGFA-211ENST00000476772 PKD1P98161 4303 aa18.22■□□□□ 0.51
VEGFA-211ENST00000476772 LINC00336Q6ZUF6 198 aa18.22■□□□□ 0.51
VEGFA-211ENST00000476772 DPH3Q96FX2 82 aa18.22■□□□□ 0.51
VEGFA-211ENST00000476772 IGLV1-50A0A075B6I6 118 aa18.21■□□□□ 0.51
VEGFA-211ENST00000476772 ATXN8Q156A1 80 aa18.21■□□□□ 0.51
VEGFA-211ENST00000476772 ZNF73O43830 326 aaPredicted RBP18.2■□□□□ 0.5
VEGFA-211ENST00000476772 FAM218AQ96MZ4 157 aa18.2■□□□□ 0.5
VEGFA-211ENST00000476772 H0YGX0 51 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms