RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 TLX1NBP0CAT3 122 aa8.95□□□□□ -0.98
TRAF4-210ENST00000475329 LRCOL1A6NCL2 159 aa8.94□□□□□ -0.98
TRAF4-210ENST00000475329 CNBPP62633 177 aaKnown RBP8.94□□□□□ -0.98
TRAF4-210ENST00000475329 LYRM7Q5U5X0 104 aa8.94□□□□□ -0.98
TRAF4-210ENST00000475329 LINC00337Q8N6G1 96 aa8.94□□□□□ -0.98
TRAF4-210ENST00000475329 XAGE1AQ9HD64 81 aa8.94□□□□□ -0.98
TRAF4-210ENST00000475329 ALMS1Q8TCU4 4167 aa8.94□□□□□ -0.98
TRAF4-210ENST00000475329 PSMB2P49721 201 aa8.93□□□□□ -0.98
TRAF4-210ENST00000475329 RPL18AQ02543 176 aaKnown RBP8.93□□□□□ -0.98
TRAF4-210ENST00000475329 C1orf134Q5TEV5 83 aa8.93□□□□□ -0.98
TRAF4-210ENST00000475329 Q6ZRP5 223 aa8.93□□□□□ -0.98
TRAF4-210ENST00000475329 LOC107984640A0A0U1RRK4 108 aa8.92□□□□□ -0.98
TRAF4-210ENST00000475329 GAGE2EQ4V326 116 aa8.92□□□□□ -0.98
TRAF4-210ENST00000475329 GAGE2DQ9UEU5 116 aa8.92□□□□□ -0.98
TRAF4-210ENST00000475329 SPCS1Q9Y6A9 102 aa8.92□□□□□ -0.98
TRAF4-210ENST00000475329 K7EP34 96 aa8.91□□□□□ -0.98
TRAF4-210ENST00000475329 NCR3O14931 201 aa8.91□□□□□ -0.98
TRAF4-210ENST00000475329 GTF2H5Q6ZYL4 71 aa8.91□□□□□ -0.98
TRAF4-210ENST00000475329 DNAH6Q9C0G6 4158 aa8.9□□□□□ -0.98
TRAF4-210ENST00000475329 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.9□□□□□ -0.98
TRAF4-210ENST00000475329 GAGE10A6NGK3 116 aa8.9□□□□□ -0.98
TRAF4-210ENST00000475329 Q8NDZ9 215 aa8.9□□□□□ -0.98
TRAF4-210ENST00000475329 OR13C6PQ8NH95 151 aa8.9□□□□□ -0.98
TRAF4-210ENST00000475329 TRBV10-2A0A0K0K1G8 114 aa8.89□□□□□ -0.99
TRAF4-210ENST00000475329 TRIAP1O43715 76 aa8.89□□□□□ -0.99
TRAF4-210ENST00000475329 SCGB1C2P0DMR2 95 aa8.89□□□□□ -0.99
TRAF4-210ENST00000475329 PRR3P79522 188 aaKnown RBP8.89□□□□□ -0.99
TRAF4-210ENST00000475329 A0A087WTM6 91 aa8.88□□□□□ -0.99
TRAF4-210ENST00000475329 COX6CP09669 75 aa8.88□□□□□ -0.99
TRAF4-210ENST00000475329 UBE2V1Q13404 147 aa8.88□□□□□ -0.99
TRAF4-210ENST00000475329 C9orf129Q5T035 196 aaKnown RBP8.88□□□□□ -0.99
TRAF4-210ENST00000475329 Q8N814 137 aa8.88□□□□□ -0.99
TRAF4-210ENST00000475329 PKIGQ9Y2B9 76 aa8.88□□□□□ -0.99
TRAF4-210ENST00000475329 VPREB1P12018 145 aa8.87□□□□□ -0.99
TRAF4-210ENST00000475329 GAGE2BQ13066 116 aa8.87□□□□□ -0.99
TRAF4-210ENST00000475329 S100A7L2Q5SY68 101 aa8.87□□□□□ -0.99
TRAF4-210ENST00000475329 TRBV20-1A0A075B6N2 111 aa8.86□□□□□ -0.99
TRAF4-210ENST00000475329 RPL28P46779 137 aaKnown RBP8.86□□□□□ -0.99
TRAF4-210ENST00000475329 TMEM126AQ9H061 195 aa8.86□□□□□ -0.99
TRAF4-210ENST00000475329 PLA2G2DQ9UNK4 145 aa8.86□□□□□ -0.99
TRAF4-210ENST00000475329 DNAH10Q8IVF4 4471 aa8.86□□□□□ -0.99
TRAF4-210ENST00000475329 SMIM11BQ8TCY0 68 aa8.85□□□□□ -0.99
TRAF4-210ENST00000475329 M0R378 163 aa8.84□□□□□ -0.99
TRAF4-210ENST00000475329 TCL1BO95988 128 aa8.84□□□□□ -0.99
TRAF4-210ENST00000475329 C9orf163Q8N9P6 203 aa8.84□□□□□ -0.99
TRAF4-210ENST00000475329 C16orf90A8MZG2 172 aa8.83□□□□□ -1
TRAF4-210ENST00000475329 NKAPP1Q8N9T2 125 aa8.83□□□□□ -1
TRAF4-210ENST00000475329 IGLV5-37A0A075B6J1 123 aa8.82□□□□□ -1
TRAF4-210ENST00000475329 A0A096LNI7 61 aa8.82□□□□□ -1
TRAF4-210ENST00000475329 IGLV6-57P01721 117 aa8.82□□□□□ -1
TRAF4-210ENST00000475329 ATXN8Q156A1 80 aa8.82□□□□□ -1
TRAF4-210ENST00000475329 SERTAD4-AS1Q5TG53 156 aa8.82□□□□□ -1
TRAF4-210ENST00000475329 TRBV10-3A0A0K0K1G6 114 aa8.81□□□□□ -1
TRAF4-210ENST00000475329 H3BMG7 143 aa8.81□□□□□ -1
TRAF4-210ENST00000475329 CLEC2BQ92478 149 aa8.81□□□□□ -1
TRAF4-210ENST00000475329 IGKV2-24A0A0C4DH68 120 aa8.8□□□□□ -1
TRAF4-210ENST00000475329 CBY1Q9Y3M2 126 aa8.8□□□□□ -1
TRAF4-210ENST00000475329 LCE6AA0A183 80 aa8.79□□□□□ -1
TRAF4-210ENST00000475329 FAM168BA1KXE4 195 aa8.79□□□□□ -1
TRAF4-210ENST00000475329 FAM19A5Q7Z5A7 132 aaPredicted RBP8.79□□□□□ -1
TRAF4-210ENST00000475329 KMT2CQ8NEZ4 4911 aaKnown RBP8.78□□□□□ -1
TRAF4-210ENST00000475329 TRAV23DV6A0A075B6W5 121 aa8.78□□□□□ -1
TRAF4-210ENST00000475329 H0YGX0 51 aa8.78□□□□□ -1
TRAF4-210ENST00000475329 LST1O00453 97 aa8.78□□□□□ -1
TRAF4-210ENST00000475329 RTL8CO15255 209 aa8.78□□□□□ -1
TRAF4-210ENST00000475329 TNP2Q05952 138 aa8.78□□□□□ -1
TRAF4-210ENST00000475329 SDIM1Q6ZPB5 146 aa8.77□□□□□ -1.01
TRAF4-210ENST00000475329 C7orf33Q8WU49 177 aa8.77□□□□□ -1.01
TRAF4-210ENST00000475329 LINC00474Q9P2X8 69 aa8.77□□□□□ -1.01
TRAF4-210ENST00000475329 KMT2AQ03164 3969 aa8.76□□□□□ -1.01
TRAF4-210ENST00000475329 IGLV5-52A0A0A0MRZ9 124 aa8.76□□□□□ -1.01
TRAF4-210ENST00000475329 LINC01620Q4KN68 170 aa8.76□□□□□ -1.01
TRAF4-210ENST00000475329 C6orf99Q4VX62 202 aa8.76□□□□□ -1.01
TRAF4-210ENST00000475329 KRTAP7-1Q8IUC3 87 aa8.76□□□□□ -1.01
TRAF4-210ENST00000475329 DIRC1Q969H9 104 aa8.76□□□□□ -1.01
TRAF4-210ENST00000475329 C22orf24Q9Y442 160 aa8.76□□□□□ -1.01
TRAF4-210ENST00000475329 CHTF8P0CG12 524 aa8.75□□□□□ -1.01
TRAF4-210ENST00000475329 MRPL55Q7Z7F7 128 aaKnown RBP8.75□□□□□ -1.01
TRAF4-210ENST00000475329 F8W1H4 67 aa8.74□□□□□ -1.01
TRAF4-210ENST00000475329 M0QXV9 152 aa8.74□□□□□ -1.01
TRAF4-210ENST00000475329 TRACP01848 142 aa8.74□□□□□ -1.01
TRAF4-210ENST00000475329 FAM218AQ96MZ4 157 aa8.74□□□□□ -1.01
TRAF4-210ENST00000475329 DNAH2Q9P225 4427 aa8.73□□□□□ -1.01
TRAF4-210ENST00000475329 C9JAW5 83 aa8.73□□□□□ -1.01
TRAF4-210ENST00000475329 ZNF73O43830 326 aaPredicted RBP8.73□□□□□ -1.01
TRAF4-210ENST00000475329 MTURNQ8N3F0 131 aa8.73□□□□□ -1.01
TRAF4-210ENST00000475329 PRO0461Q9UI25 63 aa8.73□□□□□ -1.01
TRAF4-210ENST00000475329 TRBV7-6A0A0J9YX20 115 aa8.72□□□□□ -1.01
TRAF4-210ENST00000475329 A0A1W2PNN7 141 aa8.72□□□□□ -1.01
TRAF4-210ENST00000475329 PRYO14603 147 aa8.72□□□□□ -1.01
TRAF4-210ENST00000475329 FUSP35637 526 aaKnown RBP eCLIP8.72□□□□□ -1.01
TRAF4-210ENST00000475329 LINC00167Q96N53 147 aa8.72□□□□□ -1.01
TRAF4-210ENST00000475329 KCNQ1DNQ9H478 68 aa8.72□□□□□ -1.01
TRAF4-210ENST00000475329 IGLV1-50A0A075B6I6 118 aa8.71□□□□□ -1.02
TRAF4-210ENST00000475329 A0A087WYN8 130 aa8.71□□□□□ -1.02
TRAF4-210ENST00000475329 SPACA4Q8TDM5 124 aa8.71□□□□□ -1.02
TRAF4-210ENST00000475329 DNAH17Q9UFH2 4485 aa8.71□□□□□ -1.02
TRAF4-210ENST00000475329 A0A1B0GX51 115 aa8.7□□□□□ -1.02
TRAF4-210ENST00000475329 RPL37AP8A6NKH3 93 aa8.7□□□□□ -1.02
TRAF4-210ENST00000475329 SLC25A20O43772 301 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms