RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 DEFB130BP0DP73 79 aa12.66□□□□□ -0.38
ECHDC1-214ENST00000474289 DEFB130AP0DP74 79 aa12.66□□□□□ -0.38
ECHDC1-214ENST00000474289 CD164L2Q6UWJ8 174 aa12.66□□□□□ -0.38
ECHDC1-214ENST00000474289 CACNA1AO00555 2505 aa12.66□□□□□ -0.38
ECHDC1-214ENST00000474289 MIFP14174 115 aa12.66□□□□□ -0.38
ECHDC1-214ENST00000474289 PIEZO1Q92508 2521 aa12.65□□□□□ -0.38
ECHDC1-214ENST00000474289 IGLV10-54A0A075B6I4 117 aa12.65□□□□□ -0.38
ECHDC1-214ENST00000474289 CCL24O00175 119 aa12.65□□□□□ -0.38
ECHDC1-214ENST00000474289 NAV2Q8IVL1 2488 aa12.65□□□□□ -0.38
ECHDC1-214ENST00000474289 SONP18583 2426 aaKnown RBP12.65□□□□□ -0.38
ECHDC1-214ENST00000474289 A0A096LPF7 62 aa12.64□□□□□ -0.39
ECHDC1-214ENST00000474289 CHCHD10Q8WYQ3 142 aaPredicted RBP12.64□□□□□ -0.39
ECHDC1-214ENST00000474289 PKIGQ9Y2B9 76 aa12.64□□□□□ -0.39
ECHDC1-214ENST00000474289 APCP25054 2843 aa12.64□□□□□ -0.39
ECHDC1-214ENST00000474289 IGLV6-57P01721 117 aa12.63□□□□□ -0.39
ECHDC1-214ENST00000474289 ATP5EP56381 51 aaPredicted RBP12.63□□□□□ -0.39
ECHDC1-214ENST00000474289 NREPQ16612 68 aa12.62□□□□□ -0.39
ECHDC1-214ENST00000474289 C19orf73Q9NVV2 129 aa12.62□□□□□ -0.39
ECHDC1-214ENST00000474289 C10orf25Q5T742 122 aa12.61□□□□□ -0.39
ECHDC1-214ENST00000474289 ZFYVE26Q68DK2 2539 aa12.61□□□□□ -0.39
ECHDC1-214ENST00000474289 LINC01006Q8NI28 216 aa12.61□□□□□ -0.39
ECHDC1-214ENST00000474289 TMEM254Q8TBM7 123 aa12.61□□□□□ -0.39
ECHDC1-214ENST00000474289 NBEAL2Q6ZNJ1 2754 aa12.6□□□□□ -0.39
ECHDC1-214ENST00000474289 UNQ6190/PRO20217Q6UXQ8 127 aa12.59□□□□□ -0.39
ECHDC1-214ENST00000474289 BPY2O14599 106 aa12.58□□□□□ -0.4
ECHDC1-214ENST00000474289 CMC4P56277 68 aaPredicted RBP12.58□□□□□ -0.4
ECHDC1-214ENST00000474289 H3BQ85 93 aa12.58□□□□□ -0.4
ECHDC1-214ENST00000474289 BRK1Q8WUW1 75 aa12.58□□□□□ -0.4
ECHDC1-214ENST00000474289 FAM229BQ4G0N7 80 aa12.57□□□□□ -0.4
ECHDC1-214ENST00000474289 GCN1Q92616 2671 aaKnown RBP12.57□□□□□ -0.4
ECHDC1-214ENST00000474289 DNAJC9-AS1A6NH13 148 aa12.57□□□□□ -0.4
ECHDC1-214ENST00000474289 REG3AQ06141 175 aa12.57□□□□□ -0.4
ECHDC1-214ENST00000474289 BBC3Q96PG8 261 aaPredicted RBP12.57□□□□□ -0.4
ECHDC1-214ENST00000474289 ANGP03950 147 aaKnown RBP12.56□□□□□ -0.4
ECHDC1-214ENST00000474289 PRB1P04280 392 aa12.55□□□□□ -0.4
ECHDC1-214ENST00000474289 ZNF462Q96JM2 2506 aa12.55□□□□□ -0.4
ECHDC1-214ENST00000474289 LINC00612Q8N6U2 182 aa12.54□□□□□ -0.4
ECHDC1-214ENST00000474289 DEFB113Q30KQ7 82 aa12.54□□□□□ -0.4
ECHDC1-214ENST00000474289 DIRC1Q969H9 104 aa12.54□□□□□ -0.4
ECHDC1-214ENST00000474289 ESM1Q9NQ30 184 aa12.54□□□□□ -0.4
ECHDC1-214ENST00000474289 ERC2-IT1O76042 136 aa12.53□□□□□ -0.4
ECHDC1-214ENST00000474289 SPAG11BQ08648 103 aa12.53□□□□□ -0.4
ECHDC1-214ENST00000474289 Q8N9L7 120 aa12.53□□□□□ -0.4
ECHDC1-214ENST00000474289 PRO0255Q9UI72 69 aa12.53□□□□□ -0.4
ECHDC1-214ENST00000474289 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.53□□□□□ -0.4
ECHDC1-214ENST00000474289 MPLKIPQ8TAP9 179 aa12.52□□□□□ -0.41
ECHDC1-214ENST00000474289 ITPR3Q14573 2671 aa12.52□□□□□ -0.41
ECHDC1-214ENST00000474289 A0A0J9YWU9 116 aa12.51□□□□□ -0.41
ECHDC1-214ENST00000474289 CYSRT1A8MQ03 144 aa12.51□□□□□ -0.41
ECHDC1-214ENST00000474289 IGLV1-51P01701 117 aa12.51□□□□□ -0.41
ECHDC1-214ENST00000474289 IGHV4-30-4P0DP06 118 aa12.51□□□□□ -0.41
ECHDC1-214ENST00000474289 A0A0U1RQV1 116 aa12.5□□□□□ -0.41
ECHDC1-214ENST00000474289 ZNF73O43830 326 aaPredicted RBP12.49□□□□□ -0.41
ECHDC1-214ENST00000474289 PRYO14603 147 aa12.49□□□□□ -0.41
ECHDC1-214ENST00000474289 COX7BP24311 80 aa12.49□□□□□ -0.41
ECHDC1-214ENST00000474289 KRTAP1-3Q8IUG1 177 aa12.49□□□□□ -0.41
ECHDC1-214ENST00000474289 OCR1Q9BZK8 76 aa12.49□□□□□ -0.41
ECHDC1-214ENST00000474289 IGKV4-1P06312 121 aa12.48□□□□□ -0.41
ECHDC1-214ENST00000474289 XAGE1AQ9HD64 81 aa12.48□□□□□ -0.41
ECHDC1-214ENST00000474289 CCDC168Q8NDH2 2452 aa12.48□□□□□ -0.41
ECHDC1-214ENST00000474289 UBR5O95071 2799 aaPredicted RBP12.47□□□□□ -0.41
ECHDC1-214ENST00000474289 ELOF1P60002 83 aaKnown RBP12.47□□□□□ -0.41
ECHDC1-214ENST00000474289 F8WDY8 70 aa12.45□□□□□ -0.42
ECHDC1-214ENST00000474289 FUSP35637 526 aaKnown RBP eCLIP12.45□□□□□ -0.42
ECHDC1-214ENST00000474289 ESRGQ1W209 222 aa12.45□□□□□ -0.42
ECHDC1-214ENST00000474289 Q6ZTC4 211 aa12.43□□□□□ -0.42
ECHDC1-214ENST00000474289 FLNAP21333 2647 aaKnown RBP12.43□□□□□ -0.42
ECHDC1-214ENST00000474289 C1orf195Q5TG92 126 aa12.43□□□□□ -0.42
ECHDC1-214ENST00000474289 C6orf48Q9UBA6 75 aa12.42□□□□□ -0.42
ECHDC1-214ENST00000474289 X6R8D5 127 aa12.42□□□□□ -0.42
ECHDC1-214ENST00000474289 HIGD2AQ9BW72 106 aa12.41□□□□□ -0.42
ECHDC1-214ENST00000474289 GVQW2A0A096LPI5 108 aaPredicted RBP12.4□□□□□ -0.42
ECHDC1-214ENST00000474289 DAD1P61803 113 aa12.38□□□□□ -0.43
ECHDC1-214ENST00000474289 CELA1Q9UNI1 258 aa12.37□□□□□ -0.43
ECHDC1-214ENST00000474289 C3orf84H3BNL1 204 aa12.37□□□□□ -0.43
ECHDC1-214ENST00000474289 VPREB1P12018 145 aa12.36□□□□□ -0.43
ECHDC1-214ENST00000474289 LINC00528Q8N1L1 170 aa12.36□□□□□ -0.43
ECHDC1-214ENST00000474289 KLK12Q9UKR0 248 aa12.36□□□□□ -0.43
ECHDC1-214ENST00000474289 V9GYY9 64 aa12.36□□□□□ -0.43
ECHDC1-214ENST00000474289 USP24Q9UPU5 2620 aa12.36□□□□□ -0.43
ECHDC1-214ENST00000474289 MTORP42345 2549 aa12.35□□□□□ -0.43
ECHDC1-214ENST00000474289 DEFB4AO15263 64 aa12.35□□□□□ -0.43
ECHDC1-214ENST00000474289 HIGD2BQ4VC39 106 aa12.34□□□□□ -0.43
ECHDC1-214ENST00000474289 PRR34Q9NV39 138 aa12.33□□□□□ -0.43
ECHDC1-214ENST00000474289 ACANP16112 2415 aa12.33□□□□□ -0.44
ECHDC1-214ENST00000474289 LYRM9A8MSI8 78 aa12.32□□□□□ -0.44
ECHDC1-214ENST00000474289 SMIM29Q86T20 159 aa12.3□□□□□ -0.44
ECHDC1-214ENST00000474289 FAM30AQ9NZY2 134 aa12.3□□□□□ -0.44
ECHDC1-214ENST00000474289 hDV103S1A0JD37 113 aa12.29□□□□□ -0.44
ECHDC1-214ENST00000474289 M0R378 163 aa12.29□□□□□ -0.44
ECHDC1-214ENST00000474289 ANK3Q12955 4377 aaKnown RBP12.29□□□□□ -0.44
ECHDC1-214ENST00000474289 LELP1Q5T871 98 aa12.28□□□□□ -0.44
ECHDC1-214ENST00000474289 SEC61GP60059 68 aa12.27□□□□□ -0.45
ECHDC1-214ENST00000474289 LRCOL1A6NCL2 159 aa12.26□□□□□ -0.45
ECHDC1-214ENST00000474289 LCE6AA0A183 80 aa12.25□□□□□ -0.45
ECHDC1-214ENST00000474289 KRTAP1-1Q07627 177 aa12.25□□□□□ -0.45
ECHDC1-214ENST00000474289 CAMK2N2Q96S95 79 aa12.25□□□□□ -0.45
ECHDC1-214ENST00000474289 VWFP04275 2813 aa12.24□□□□□ -0.45
ECHDC1-214ENST00000474289 DEFB135Q30KP9 77 aa12.24□□□□□ -0.45
ECHDC1-214ENST00000474289 Q6ZRP5 223 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms