RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, human

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MCF2L-223	ENST00000473345	ZNF22	P17026	224 aa	Predicted RBP	5.7	□□□□□ -1.5
MCF2L-223	ENST00000473345	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	5.7	□□□□□ -1.5
MCF2L-223	ENST00000473345	IGLV1-50	A0A075B6I6	118 aa		5.69	□□□□□ -1.5
MCF2L-223	ENST00000473345	TRAV13-1	A0A0B4J241	112 aa		5.69	□□□□□ -1.5
MCF2L-223	ENST00000473345	IGHV3OR16-9	A0A0B4J2B5	98 aa		5.69	□□□□□ -1.5
MCF2L-223	ENST00000473345	TMEM223	A0PJW6	202 aa		5.69	□□□□□ -1.5
MCF2L-223	ENST00000473345	HERVK_113	P63121	156 aa		5.69	□□□□□ -1.5
MCF2L-223	ENST00000473345	SPAG11B	Q08648	103 aa		5.69	□□□□□ -1.5
MCF2L-223	ENST00000473345	SPATA45	Q537H7	98 aa		5.69	□□□□□ -1.5
MCF2L-223	ENST00000473345	ANKRD39	Q53RE8	183 aa		5.69	□□□□□ -1.5
MCF2L-223	ENST00000473345	UNQ6190/PRO20217	Q6UXQ8	127 aa		5.69	□□□□□ -1.5
MCF2L-223	ENST00000473345	C6orf48	Q9UBA6	75 aa		5.69	□□□□□ -1.5
MCF2L-223	ENST00000473345	PAM16	Q9Y3D7	125 aa		5.69	□□□□□ -1.5
MCF2L-223	ENST00000473345		E9PLD3	99 aa		5.68	□□□□□ -1.5
MCF2L-223	ENST00000473345	TSPAN13	O95857	204 aa		5.68	□□□□□ -1.5
MCF2L-223	ENST00000473345	CDKN2A-AS1	Q9UH64	79 aa		5.68	□□□□□ -1.5
MCF2L-223	ENST00000473345		A0A087X002	238 aa		5.67	□□□□□ -1.5
MCF2L-223	ENST00000473345	IGKV2D-26	A0A0A0MRZ7	120 aa		5.67	□□□□□ -1.5
MCF2L-223	ENST00000473345	IGLV5-39	A0A0G2JS06	123 aa		5.67	□□□□□ -1.5
MCF2L-223	ENST00000473345	HSBP1L1	C9JCN9	74 aa		5.67	□□□□□ -1.5
MCF2L-223	ENST00000473345	TLX1NB	P0CAT3	122 aa		5.67	□□□□□ -1.5
MCF2L-223	ENST00000473345	TMEM170B	Q5T4T1	132 aa		5.67	□□□□□ -1.5
MCF2L-223	ENST00000473345	LINC01561	Q8N1V8	128 aa		5.67	□□□□□ -1.5
MCF2L-223	ENST00000473345	GEMIN7	Q9H840	131 aa	Known RBP	5.67	□□□□□ -1.5
MCF2L-223	ENST00000473345	DLEU1	O43261	78 aa		5.66	□□□□□ -1.5
MCF2L-223	ENST00000473345	COX8A	P10176	69 aa		5.66	□□□□□ -1.5
MCF2L-223	ENST00000473345	KIAA0087	Q14695	138 aa		5.66	□□□□□ -1.5
MCF2L-223	ENST00000473345	C9orf129	Q5T035	196 aa	Known RBP	5.66	□□□□□ -1.5
MCF2L-223	ENST00000473345	SMIM1	B2RUZ4	78 aa		5.65	□□□□□ -1.5
MCF2L-223	ENST00000473345		H3BRM9	83 aa		5.65	□□□□□ -1.5
MCF2L-223	ENST00000473345	NDUFA1	O15239	70 aa		5.65	□□□□□ -1.5
MCF2L-223	ENST00000473345	LEPROT	O15243	131 aa		5.65	□□□□□ -1.5
MCF2L-223	ENST00000473345	GAGE2E	Q4V326	116 aa		5.65	□□□□□ -1.5
MCF2L-223	ENST00000473345	BOD1L2	Q8IYS8	172 aa		5.65	□□□□□ -1.5
MCF2L-223	ENST00000473345	LINC00469	Q8N7U9	141 aa		5.65	□□□□□ -1.5
MCF2L-223	ENST00000473345	ORAOV1	Q8WV07	137 aa		5.65	□□□□□ -1.5
MCF2L-223	ENST00000473345	GAGE2D	Q9UEU5	116 aa		5.65	□□□□□ -1.5
MCF2L-223	ENST00000473345	MUC17	Q685J3	4493 aa		5.65	□□□□□ -1.51
MCF2L-223	ENST00000473345	TSTD3	H0UI37	97 aa		5.64	□□□□□ -1.51
MCF2L-223	ENST00000473345		M0QXV9	152 aa		5.64	□□□□□ -1.51
MCF2L-223	ENST00000473345	TSPEAR-AS2	P59090	65 aa		5.64	□□□□□ -1.51
MCF2L-223	ENST00000473345	HERVK_113	P61574	105 aa		5.64	□□□□□ -1.51
MCF2L-223	ENST00000473345	C14orf144	Q96I85	54 aa		5.64	□□□□□ -1.51
MCF2L-223	ENST00000473345	PRO1933	Q9H354	126 aa		5.64	□□□□□ -1.51
MCF2L-223	ENST00000473345	TRBV30	A0A0K0K1B3	111 aa		5.63	□□□□□ -1.51
MCF2L-223	ENST00000473345		J3QQQ9	107 aa		5.63	□□□□□ -1.51
MCF2L-223	ENST00000473345	SPINK8	P0C7L1	97 aa		5.63	□□□□□ -1.51
MCF2L-223	ENST00000473345	RPL13A	P40429	203 aa	Known RBP	5.63	□□□□□ -1.51
MCF2L-223	ENST00000473345	SLC25A34	Q6PIV7	304 aa		5.63	□□□□□ -1.51
MCF2L-223	ENST00000473345	C2orf82	Q6UX34	121 aa		5.63	□□□□□ -1.51
MCF2L-223	ENST00000473345	PCP2	Q8IVA1	136 aa		5.63	□□□□□ -1.51
MCF2L-223	ENST00000473345	PLEKHB2	Q96CS7	222 aa		5.63	□□□□□ -1.51
MCF2L-223	ENST00000473345	RETNLB	Q9BQ08	111 aa		5.63	□□□□□ -1.51
MCF2L-223	ENST00000473345	MIEN1	Q9BRT3	115 aa		5.63	□□□□□ -1.51
MCF2L-223	ENST00000473345	ANAPC11	Q9NYG5	84 aa		5.63	□□□□□ -1.51
MCF2L-223	ENST00000473345	UQCR10	Q9UDW1	63 aa		5.63	□□□□□ -1.51
MCF2L-223	ENST00000473345	NMU	P48645	174 aa		5.62	□□□□□ -1.51
MCF2L-223	ENST00000473345	KRTAP13-2	Q52LG2	175 aa		5.62	□□□□□ -1.51
MCF2L-223	ENST00000473345	TTTY13	Q9BZ97	58 aa		5.62	□□□□□ -1.51
MCF2L-223	ENST00000473345		A0A0U1RQV1	116 aa		5.61	□□□□□ -1.51
MCF2L-223	ENST00000473345	MYMX	A0A1B0GTQ4	84 aa		5.61	□□□□□ -1.51
MCF2L-223	ENST00000473345	C2orf91	Q6ZV80	131 aa		5.61	□□□□□ -1.51
MCF2L-223	ENST00000473345	HIGD1B	Q9P298	99 aa		5.61	□□□□□ -1.51
MCF2L-223	ENST00000473345	NDUFC2-KCTD14	E9PQ53	114 aa		5.6	□□□□□ -1.51
MCF2L-223	ENST00000473345	ZNF861P	O60384	105 aa		5.6	□□□□□ -1.51
MCF2L-223	ENST00000473345	DDT	P30046	118 aa		5.6	□□□□□ -1.51
MCF2L-223	ENST00000473345	UBE2B	P63146	152 aa		5.6	□□□□□ -1.51
MCF2L-223	ENST00000473345		Q8IZM0	81 aa		5.6	□□□□□ -1.51
MCF2L-223	ENST00000473345	ZNF625	Q96I27	306 aa	Predicted RBP	5.6	□□□□□ -1.51
MCF2L-223	ENST00000473345	TP73-AS1	Q9UF72	201 aa		5.6	□□□□□ -1.51
MCF2L-223	ENST00000473345	LGALS3	P17931	250 aa	Known RBP	5.59	□□□□□ -1.51
MCF2L-223	ENST00000473345	COX7B2	Q8TF08	81 aa		5.59	□□□□□ -1.51
MCF2L-223	ENST00000473345	KRTAP4-1	Q9BYQ7	146 aa		5.59	□□□□□ -1.51
MCF2L-223	ENST00000473345	ZNF815P	A8K554	130 aa		5.58	□□□□□ -1.52
MCF2L-223	ENST00000473345	NDUFA12	Q9UI09	145 aa		5.58	□□□□□ -1.52
MCF2L-223	ENST00000473345		A0A0J9YXY3	114 aa		5.57	□□□□□ -1.52
MCF2L-223	ENST00000473345	HERV-K104	P63124	156 aa		5.57	□□□□□ -1.52
MCF2L-223	ENST00000473345	LBH	Q53QV2	105 aa	Predicted RBP	5.57	□□□□□ -1.52
MCF2L-223	ENST00000473345	SFTA2	Q6UW10	78 aa		5.57	□□□□□ -1.52
MCF2L-223	ENST00000473345	C22orf24	Q9Y442	160 aa		5.57	□□□□□ -1.52
MCF2L-223	ENST00000473345	PCP4L1	A6NKN8	68 aa		5.56	□□□□□ -1.52
MCF2L-223	ENST00000473345	TIMM17B	O60830	172 aa		5.56	□□□□□ -1.52
MCF2L-223	ENST00000473345	CXCL5	P42830	114 aa		5.56	□□□□□ -1.52
MCF2L-223	ENST00000473345	LITAF	Q99732	161 aa		5.56	□□□□□ -1.52
MCF2L-223	ENST00000473345	XAGE1A	Q9HD64	81 aa		5.56	□□□□□ -1.52
MCF2L-223	ENST00000473345	SPANXB1	Q9NS25	103 aa	Predicted RBP	5.56	□□□□□ -1.52
MCF2L-223	ENST00000473345	LINC00587	B1AMM8	73 aa		5.55	□□□□□ -1.52
MCF2L-223	ENST00000473345	PRSS2	P07478	247 aa		5.55	□□□□□ -1.52
MCF2L-223	ENST00000473345	CKS1B	P61024	79 aa		5.55	□□□□□ -1.52
MCF2L-223	ENST00000473345	CTAG1A	P78358	180 aa		5.55	□□□□□ -1.52
MCF2L-223	ENST00000473345	TAL2	Q16559	108 aa		5.55	□□□□□ -1.52
MCF2L-223	ENST00000473345	C6orf226	Q5I0X4	101 aa		5.55	□□□□□ -1.52
MCF2L-223	ENST00000473345	KRTAP13-1	Q8IUC0	172 aa		5.55	□□□□□ -1.52
MCF2L-223	ENST00000473345	TYMSOS	Q8TAI1	123 aa		5.55	□□□□□ -1.52
MCF2L-223	ENST00000473345	TOMM7	Q9P0U1	55 aa		5.55	□□□□□ -1.52
MCF2L-223	ENST00000473345	SPANXD	Q9BXN6	97 aa		5.54	□□□□□ -1.52
MCF2L-223	ENST00000473345	SPANXC	Q9NY87	97 aa		5.54	□□□□□ -1.52
MCF2L-223	ENST00000473345	HSD52	Q0P140	79 aa		5.53	□□□□□ -1.52
MCF2L-223	ENST00000473345	TPRXL	Q17RH7	258 aa		5.53	□□□□□ -1.52
MCF2L-223	ENST00000473345	ADAMTSL4-AS1	Q5T5F5	129 aa		5.53	□□□□□ -1.52

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