RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 HIST1H2BLQ99880 126 aa5.75□□□□□ -1.49
SMC4-214ENST00000472991 LINC00474Q9P2X8 69 aa5.75□□□□□ -1.49
SMC4-214ENST00000472991 GAGE2DQ9UEU5 116 aa5.75□□□□□ -1.49
SMC4-214ENST00000472991 TSPEAR-AS2P59090 65 aa5.74□□□□□ -1.49
SMC4-214ENST00000472991 ZNF625Q96I27 306 aaPredicted RBP5.74□□□□□ -1.49
SMC4-214ENST00000472991 PLAC8Q9NZF1 115 aa5.74□□□□□ -1.49
SMC4-214ENST00000472991 C20orf202A1L168 122 aa5.73□□□□□ -1.49
SMC4-214ENST00000472991 C5orf52A6NGY3 159 aa5.73□□□□□ -1.49
SMC4-214ENST00000472991 LEPROTO15243 131 aa5.73□□□□□ -1.49
SMC4-214ENST00000472991 FAT1Q14517 4588 aa5.72□□□□□ -1.49
SMC4-214ENST00000472991 PFN2P35080 140 aa5.72□□□□□ -1.49
SMC4-214ENST00000472991 C9orf129Q5T035 196 aaKnown RBP5.72□□□□□ -1.49
SMC4-214ENST00000472991 Q5VSD8 79 aa5.72□□□□□ -1.49
SMC4-214ENST00000472991 SFTA2Q6UW10 78 aa5.72□□□□□ -1.49
SMC4-214ENST00000472991 PLEKHB2Q96CS7 222 aa5.72□□□□□ -1.49
SMC4-214ENST00000472991 XAGE1AQ9HD64 81 aa5.72□□□□□ -1.49
SMC4-214ENST00000472991 NDUFA12Q9UI09 145 aa5.72□□□□□ -1.49
SMC4-214ENST00000472991 ERG28Q9UKR5 140 aa5.72□□□□□ -1.49
SMC4-214ENST00000472991 A0A1W2PNN7 141 aa5.71□□□□□ -1.5
SMC4-214ENST00000472991 FAM168BA1KXE4 195 aa5.71□□□□□ -1.5
SMC4-214ENST00000472991 J3QQQ9 107 aa5.71□□□□□ -1.5
SMC4-214ENST00000472991 FAM19A5Q7Z5A7 132 aaPredicted RBP5.71□□□□□ -1.5
SMC4-214ENST00000472991 ATOH7Q8N100 152 aa5.71□□□□□ -1.5
SMC4-214ENST00000472991 PKHD1L1Q86WI1 4243 aa5.7□□□□□ -1.5
SMC4-214ENST00000472991 MYMXA0A1B0GTQ4 84 aa5.7□□□□□ -1.5
SMC4-214ENST00000472991 EPM2AB3EWF7 344 aa5.7□□□□□ -1.5
SMC4-214ENST00000472991 E9PLD3 99 aa5.7□□□□□ -1.5
SMC4-214ENST00000472991 LGALS3P17931 250 aaKnown RBP5.7□□□□□ -1.5
SMC4-214ENST00000472991 MEIG1Q5JSS6 88 aa5.7□□□□□ -1.5
SMC4-214ENST00000472991 TMA7Q9Y2S6 64 aaKnown RBP5.7□□□□□ -1.5
SMC4-214ENST00000472991 A0A0U1RRA0 63 aa5.69□□□□□ -1.5
SMC4-214ENST00000472991 HERV-K104P63124 156 aa5.69□□□□□ -1.5
SMC4-214ENST00000472991 COX17Q14061 63 aa5.69□□□□□ -1.5
SMC4-214ENST00000472991 PHF5AQ7RTV0 110 aaKnown RBP5.69□□□□□ -1.5
SMC4-214ENST00000472991 IGKV2D-26A0A0A0MRZ7 120 aa5.68□□□□□ -1.5
SMC4-214ENST00000472991 M0QXV9 152 aa5.68□□□□□ -1.5
SMC4-214ENST00000472991 SMIM13P0DJ93 91 aa5.68□□□□□ -1.5
SMC4-214ENST00000472991 NMUP48645 174 aa5.68□□□□□ -1.5
SMC4-214ENST00000472991 AKR1D1P51857 326 aa5.68□□□□□ -1.5
SMC4-214ENST00000472991 LINC00158P58513 81 aa5.68□□□□□ -1.5
SMC4-214ENST00000472991 SERTAD4-AS1Q5TG53 156 aa5.68□□□□□ -1.5
SMC4-214ENST00000472991 KRTAP7-1Q8IUC3 87 aa5.68□□□□□ -1.5
SMC4-214ENST00000472991 C7orf33Q8WU49 177 aa5.68□□□□□ -1.5
SMC4-214ENST00000472991 RPL37AP61513 92 aaKnown RBP5.67□□□□□ -1.5
SMC4-214ENST00000472991 SND1-IT1Q9HBX3 110 aa5.67□□□□□ -1.5
SMC4-214ENST00000472991 SRRM2Q9UQ35 2752 aaKnown RBP5.67□□□□□ -1.5
SMC4-214ENST00000472991 ABCA13Q86UQ4 5058 aa5.66□□□□□ -1.5
SMC4-214ENST00000472991 SCGB1D1O95968 90 aa5.66□□□□□ -1.5
SMC4-214ENST00000472991 C21orf62-AS1Q17RA5 79 aa5.66□□□□□ -1.5
SMC4-214ENST00000472991 MIR7-3HGQ8N6C7 128 aa5.66□□□□□ -1.5
SMC4-214ENST00000472991 TTTY13Q9BZ97 58 aa5.66□□□□□ -1.5
SMC4-214ENST00000472991 A0A0J9YXY3 114 aa5.65□□□□□ -1.5
SMC4-214ENST00000472991 ZNF815PA8K554 130 aa5.65□□□□□ -1.5
SMC4-214ENST00000472991 LINC00587B1AMM8 73 aa5.65□□□□□ -1.5
SMC4-214ENST00000472991 KRTAP10-4P60372 401 aaPredicted RBP5.65□□□□□ -1.5
SMC4-214ENST00000472991 C22orf24Q9Y442 160 aa5.65□□□□□ -1.5
SMC4-214ENST00000472991 UBE2BP63146 152 aa5.64□□□□□ -1.51
SMC4-214ENST00000472991 PRR3P79522 188 aaKnown RBP5.64□□□□□ -1.51
SMC4-214ENST00000472991 DAND5Q8N907 189 aa5.64□□□□□ -1.51
SMC4-214ENST00000472991 NKAPP1Q8N9T2 125 aa5.64□□□□□ -1.51
SMC4-214ENST00000472991 IGLV5-37A0A075B6J1 123 aa5.63□□□□□ -1.51
SMC4-214ENST00000472991 B5MCH6 92 aa5.63□□□□□ -1.51
SMC4-214ENST00000472991 HSBP1L1C9JCN9 74 aa5.63□□□□□ -1.51
SMC4-214ENST00000472991 VPREB1P12018 145 aa5.63□□□□□ -1.51
SMC4-214ENST00000472991 MRPL55Q7Z7F7 128 aaKnown RBP5.63□□□□□ -1.51
SMC4-214ENST00000472991 KRTAP11-1Q8IUC1 163 aa5.63□□□□□ -1.51
SMC4-214ENST00000472991 PCP2Q8IVA1 136 aa5.63□□□□□ -1.51
SMC4-214ENST00000472991 Q8NDZ9 215 aa5.63□□□□□ -1.51
SMC4-214ENST00000472991 TP73-AS1Q9UF72 201 aa5.63□□□□□ -1.51
SMC4-214ENST00000472991 FLG2Q5D862 2391 aaPredicted RBP5.63□□□□□ -1.51
SMC4-214ENST00000472991 GAGE10A6NGK3 116 aa5.62□□□□□ -1.51
SMC4-214ENST00000472991 HNRNPA3P51991 378 aaKnown RBP5.62□□□□□ -1.51
SMC4-214ENST00000472991 BOD1L2Q8IYS8 172 aa5.62□□□□□ -1.51
SMC4-214ENST00000472991 PSORS1C2Q9UIG4 136 aa5.62□□□□□ -1.51
SMC4-214ENST00000472991 INAFM2P0DMQ5 153 aa5.61□□□□□ -1.51
SMC4-214ENST00000472991 NPC2P61916 151 aa5.61□□□□□ -1.51
SMC4-214ENST00000472991 RPL24P83731 157 aaKnown RBP5.61□□□□□ -1.51
SMC4-214ENST00000472991 JOSD1Q15040 202 aaPredicted RBP5.61□□□□□ -1.51
SMC4-214ENST00000472991 LBHQ53QV2 105 aaPredicted RBP5.61□□□□□ -1.51
SMC4-214ENST00000472991 C1orf137Q5JT78 98 aa5.61□□□□□ -1.51
SMC4-214ENST00000472991 ADAMTSL4-AS1Q5T5F5 129 aa5.61□□□□□ -1.51
SMC4-214ENST00000472991 LINC00167Q96N53 147 aa5.61□□□□□ -1.51
SMC4-214ENST00000472991 LITAFQ99732 161 aa5.61□□□□□ -1.51
SMC4-214ENST00000472991 PCLOQ9Y6V0 5065 aa5.6□□□□□ -1.51
SMC4-214ENST00000472991 RPL37AP8A6NKH3 93 aa5.6□□□□□ -1.51
SMC4-214ENST00000472991 TIMM17BO60830 172 aa5.6□□□□□ -1.51
SMC4-214ENST00000472991 SOSTDC1Q6X4U4 206 aa5.6□□□□□ -1.51
SMC4-214ENST00000472991 SCGB1D4Q6XE38 83 aa5.6□□□□□ -1.51
SMC4-214ENST00000472991 MIEN1Q9BRT3 115 aa5.6□□□□□ -1.51
SMC4-214ENST00000472991 LOC107984156A0A0G2JMH3 177 aa5.59□□□□□ -1.51
SMC4-214ENST00000472991 NCR3O14931 201 aa5.59□□□□□ -1.51
SMC4-214ENST00000472991 ARL17AQ8IVW1 177 aa5.59□□□□□ -1.51
SMC4-214ENST00000472991 IGKV2-28A0A075B6P5 120 aa5.58□□□□□ -1.52
SMC4-214ENST00000472991 TMEM238C9JI98 176 aa5.58□□□□□ -1.52
SMC4-214ENST00000472991 IGKV2D-28P01615 120 aa5.58□□□□□ -1.52
SMC4-214ENST00000472991 VAMP8Q9BV40 100 aa5.58□□□□□ -1.52
SMC4-214ENST00000472991 PAM16Q9Y3D7 125 aa5.58□□□□□ -1.52
SMC4-214ENST00000472991 M0R378 163 aa5.57□□□□□ -1.52
SMC4-214ENST00000472991 SPATA45Q537H7 98 aa5.57□□□□□ -1.52
SMC4-214ENST00000472991 PYY3Q5JQD4 70 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms