RNA–Protein interactions for RNA: ENST00000472888.1

RFXAP-202, Transcript of regulatory factor X associated protein, humanhuman

TSL 3

Gene RFXAP, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAP-202ENST00000472888 SPINK4O60575 86 aa0.51□□□□□ -2.33
RFXAP-202ENST00000472888 IGF2RP11717 2491 aa0.51□□□□□ -2.33
RFXAP-202ENST00000472888 ATP7BP35670 1465 aa0.51□□□□□ -2.33
RFXAP-202ENST00000472888 LRRC9Q6ZRR7 1453 aa0.51□□□□□ -2.33
RFXAP-202ENST00000472888 ST20Q9HBF5 79 aa0.51□□□□□ -2.33
RFXAP-202ENST00000472888 PPRC1Q5VV67 1664 aaKnown RBP0.5□□□□□ -2.33
RFXAP-202ENST00000472888 KIF14Q15058 1648 aa0.5□□□□□ -2.33
RFXAP-202ENST00000472888 CPSF4LA6NMK7 179 aaKnown RBP0.5□□□□□ -2.33
RFXAP-202ENST00000472888 AKAP6Q13023 2319 aa0.5□□□□□ -2.33
RFXAP-202ENST00000472888 PPLO60437 1756 aa0.5□□□□□ -2.33
RFXAP-202ENST00000472888 SCRIBQ14160 1630 aa0.49□□□□□ -2.33
RFXAP-202ENST00000472888 MAP3K4Q9Y6R4 1608 aa0.49□□□□□ -2.33
RFXAP-202ENST00000472888 PTPRQQ9UMZ3 2332 aa0.48□□□□□ -2.33
RFXAP-202ENST00000472888 SPTBN1Q01082 2364 aaKnown RBP0.48□□□□□ -2.33
RFXAP-202ENST00000472888 PKDREJQ9NTG1 2253 aa0.48□□□□□ -2.33
RFXAP-202ENST00000472888 NKTRP30414 1462 aaKnown RBP0.48□□□□□ -2.33
RFXAP-202ENST00000472888 MAGI2Q86UL8 1455 aa0.48□□□□□ -2.33
RFXAP-202ENST00000472888 LRP1Q07954 4544 aaKnown RBP0.47□□□□□ -2.33
RFXAP-202ENST00000472888 ALKQ9UM73 1620 aa0.47□□□□□ -2.33
RFXAP-202ENST00000472888 GAFA1Q96PS6 74 aa0.47□□□□□ -2.33
RFXAP-202ENST00000472888 UBR1Q8IWV7 1749 aa0.47□□□□□ -2.33
RFXAP-202ENST00000472888 URB1O60287 2271 aaKnown RBP0.47□□□□□ -2.33
RFXAP-202ENST00000472888 TENM4Q6N022 2769 aa0.46□□□□□ -2.34
RFXAP-202ENST00000472888 CCL22O00626 93 aa0.46□□□□□ -2.34
RFXAP-202ENST00000472888 NDUFB1O75438 58 aa0.46□□□□□ -2.34
RFXAP-202ENST00000472888 COX7BP24311 80 aa0.46□□□□□ -2.34
RFXAP-202ENST00000472888 RPL38P63173 70 aaKnown RBP0.46□□□□□ -2.34
RFXAP-202ENST00000472888 DEFB105AQ8NG35 78 aa0.46□□□□□ -2.34
RFXAP-202ENST00000472888 ARHGAP35Q9NRY4 1499 aa0.46□□□□□ -2.34
RFXAP-202ENST00000472888 CLIP1P30622 1438 aa0.46□□□□□ -2.34
RFXAP-202ENST00000472888 ANKRD36A6QL64 1941 aa0.45□□□□□ -2.34
RFXAP-202ENST00000472888 PHGR1C9JFL3 82 aa0.45□□□□□ -2.34
RFXAP-202ENST00000472888 MRPL34Q9BQ48 92 aaKnown RBP0.45□□□□□ -2.34
RFXAP-202ENST00000472888 FXYD6Q9H0Q3 95 aa0.45□□□□□ -2.34
RFXAP-202ENST00000472888 APLNQ9ULZ1 77 aa0.44□□□□□ -2.34
RFXAP-202ENST00000472888 GVINP1Q7Z2Y8 2422 aa0.44□□□□□ -2.34
RFXAP-202ENST00000472888 CSMD3Q7Z407 3707 aa0.43□□□□□ -2.34
RFXAP-202ENST00000472888 TRAV21A0A0B4J279 112 aa0.43□□□□□ -2.34
RFXAP-202ENST00000472888 SUPT6HQ7KZ85 1726 aaKnown RBP0.43□□□□□ -2.34
RFXAP-202ENST00000472888 PKD1L3Q7Z443 1732 aa0.43□□□□□ -2.34
RFXAP-202ENST00000472888 IGSF10Q6WRI0 2623 aa0.43□□□□□ -2.34
RFXAP-202ENST00000472888 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.43□□□□□ -2.34
RFXAP-202ENST00000472888 ERVK-7P63135 1459 aa0.42□□□□□ -2.34
RFXAP-202ENST00000472888 KMT2DO14686 5537 aa0.42□□□□□ -2.34
RFXAP-202ENST00000472888 TSC2P49815 1807 aa0.42□□□□□ -2.34
RFXAP-202ENST00000472888 KIF20BQ96Q89 1820 aa0.42□□□□□ -2.34
RFXAP-202ENST00000472888 LRRC7Q96NW7 1537 aa0.42□□□□□ -2.34
RFXAP-202ENST00000472888 FAT4Q6V0I7 4981 aa0.42□□□□□ -2.34
RFXAP-202ENST00000472888 CHD6Q8TD26 2715 aa0.42□□□□□ -2.34
RFXAP-202ENST00000472888 FMN2Q9NZ56 1722 aa0.41□□□□□ -2.34
RFXAP-202ENST00000472888 VWFP04275 2813 aa0.41□□□□□ -2.34
RFXAP-202ENST00000472888 WFDC9Q8NEX5 89 aa0.41□□□□□ -2.34
RFXAP-202ENST00000472888 URB2Q14146 1524 aaKnown RBP0.41□□□□□ -2.34
RFXAP-202ENST00000472888 NCOR2Q9Y618 2525 aa0.41□□□□□ -2.34
RFXAP-202ENST00000472888 MAST4O15021 2626 aa0.4□□□□□ -2.34
RFXAP-202ENST00000472888 PTPN13Q12923 2485 aa0.4□□□□□ -2.35
RFXAP-202ENST00000472888 H3BUT2 72 aa0.4□□□□□ -2.35
RFXAP-202ENST00000472888 DEFB121Q5J5C9 76 aa0.4□□□□□ -2.35
RFXAP-202ENST00000472888 DCAF1Q9Y4B6 1507 aa0.39□□□□□ -2.35
RFXAP-202ENST00000472888 KLK9Q2XQG4 91 aa0.39□□□□□ -2.35
RFXAP-202ENST00000472888 BVES-AS1Q5T3Y7 98 aa0.39□□□□□ -2.35
RFXAP-202ENST00000472888 ATP5EP2Q5VTU8 51 aa0.39□□□□□ -2.35
RFXAP-202ENST00000472888 UBR3Q6ZT12 1888 aa0.39□□□□□ -2.35
RFXAP-202ENST00000472888 HUWE1Q7Z6Z7 4374 aaKnown RBP0.38□□□□□ -2.35
RFXAP-202ENST00000472888 ABCC1P33527 1531 aa0.38□□□□□ -2.35
RFXAP-202ENST00000472888 TMEM131LA2VDJ0 1609 aa0.38□□□□□ -2.35
RFXAP-202ENST00000472888 H1FX-AS1Q4G0G2 97 aa0.38□□□□□ -2.35
RFXAP-202ENST00000472888 COX6B2Q6YFQ2 88 aa0.38□□□□□ -2.35
RFXAP-202ENST00000472888 CDKN2A-AS1Q9UH64 79 aa0.38□□□□□ -2.35
RFXAP-202ENST00000472888 HIVEP3Q5T1R4 2406 aa0.38□□□□□ -2.35
RFXAP-202ENST00000472888 UBR5O95071 2799 aaPredicted RBP0.37□□□□□ -2.35
RFXAP-202ENST00000472888 ATRQ13535 2644 aa0.36□□□□□ -2.35
RFXAP-202ENST00000472888 PKD1L1Q8TDX9 2849 aa0.36□□□□□ -2.35
RFXAP-202ENST00000472888 HEPN1Q6WQI6 88 aa0.36□□□□□ -2.35
RFXAP-202ENST00000472888 KDM5DQ9BY66 1539 aa0.36□□□□□ -2.35
RFXAP-202ENST00000472888 RGPD2P0DJD1 1756 aa0.36□□□□□ -2.35
RFXAP-202ENST00000472888 COL14A1Q05707 1796 aaKnown RBP0.36□□□□□ -2.35
RFXAP-202ENST00000472888 ABCA2Q9BZC7 2435 aa0.36□□□□□ -2.35
RFXAP-202ENST00000472888 RGPD1P0DJD0 1748 aa0.35□□□□□ -2.35
RFXAP-202ENST00000472888 QSER1Q2KHR3 1735 aa0.35□□□□□ -2.35
RFXAP-202ENST00000472888 HRNRQ86YZ3 2850 aaPredicted RBP0.35□□□□□ -2.35
RFXAP-202ENST00000472888 UMAD1C9J7I0 102 aa0.35□□□□□ -2.35
RFXAP-202ENST00000472888 HMGA1P17096 107 aaKnown RBP0.35□□□□□ -2.35
RFXAP-202ENST00000472888 NCOR1O75376 2440 aa0.35□□□□□ -2.35
RFXAP-202ENST00000472888 NCOA2Q15596 1464 aa0.35□□□□□ -2.35
RFXAP-202ENST00000472888 SYNE2Q8WXH0 6885 aaKnown RBP0.34□□□□□ -2.35
RFXAP-202ENST00000472888 A0A087WXM4 84 aa0.34□□□□□ -2.36
RFXAP-202ENST00000472888 LOC730098B7Z3J9 87 aa0.34□□□□□ -2.36
RFXAP-202ENST00000472888 IFI27P40305 119 aaPredicted RBP0.34□□□□□ -2.36
RFXAP-202ENST00000472888 C18orf32Q8TCD1 76 aa0.34□□□□□ -2.36
RFXAP-202ENST00000472888 DIP2BQ9P265 1576 aa0.34□□□□□ -2.36
RFXAP-202ENST00000472888 RRBP1Q9P2E9 1410 aaKnown RBP0.34□□□□□ -2.36
RFXAP-202ENST00000472888 CELSR1Q9NYQ6 3014 aa0.33□□□□□ -2.36
RFXAP-202ENST00000472888 SPTA1P02549 2419 aa0.33□□□□□ -2.36
RFXAP-202ENST00000472888 MYCBP2O75592 4640 aa0.33□□□□□ -2.36
RFXAP-202ENST00000472888 WNK2Q9Y3S1 2297 aa0.33□□□□□ -2.36
RFXAP-202ENST00000472888 ANKARQ7Z5J8 1434 aa0.32□□□□□ -2.36
RFXAP-202ENST00000472888 USP32Q8NFA0 1604 aa0.32□□□□□ -2.36
RFXAP-202ENST00000472888 IFI6P09912 130 aa0.32□□□□□ -2.36
RFXAP-202ENST00000472888 RGPD8O14715 1765 aaPredicted RBP0.32□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms