RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 COX17Q14061 63 aa7.68□□□□□ -1.18
SMURF1-203ENST00000472627 TCTE3Q8IZS6 198 aa7.68□□□□□ -1.18
SMURF1-203ENST00000472627 MRPL18Q9H0U6 180 aaKnown RBP7.68□□□□□ -1.18
SMURF1-203ENST00000472627 ERG28Q9UKR5 140 aa7.67□□□□□ -1.18
SMURF1-203ENST00000472627 MOBPQ13875 183 aa7.66□□□□□ -1.18
SMURF1-203ENST00000472627 PCOTHQ58A44 107 aa7.66□□□□□ -1.18
SMURF1-203ENST00000472627 SSBP3-AS1Q7Z2R9 100 aa7.66□□□□□ -1.18
SMURF1-203ENST00000472627 ERASQ7Z444 233 aa7.66□□□□□ -1.18
SMURF1-203ENST00000472627 TOMM6Q96B49 74 aa7.66□□□□□ -1.18
SMURF1-203ENST00000472627 SCGB3A1Q96QR1 104 aa7.66□□□□□ -1.18
SMURF1-203ENST00000472627 LINC01549A6NIU2 74 aa7.65□□□□□ -1.18
SMURF1-203ENST00000472627 COX6B2Q6YFQ2 88 aa7.65□□□□□ -1.18
SMURF1-203ENST00000472627 IGLV9-49A0A0B4J1Y8 123 aa7.64□□□□□ -1.19
SMURF1-203ENST00000472627 LINC00483Q53H64 154 aa7.64□□□□□ -1.19
SMURF1-203ENST00000472627 SFTA2Q6UW10 78 aa7.64□□□□□ -1.19
SMURF1-203ENST00000472627 ETDCA0A1B0GVM5 59 aa7.63□□□□□ -1.19
SMURF1-203ENST00000472627 PRYO14603 147 aa7.63□□□□□ -1.19
SMURF1-203ENST00000472627 S100A12P80511 92 aa7.63□□□□□ -1.19
SMURF1-203ENST00000472627 GAGE2AQ6NT46 116 aa7.63□□□□□ -1.19
SMURF1-203ENST00000472627 SMCR5Q8TEV8 140 aa7.63□□□□□ -1.19
SMURF1-203ENST00000472627 CST9LQ9H4G1 147 aa7.61□□□□□ -1.19
SMURF1-203ENST00000472627 PEA15Q15121 130 aa7.6□□□□□ -1.19
SMURF1-203ENST00000472627 PMVKQ15126 192 aa7.6□□□□□ -1.19
SMURF1-203ENST00000472627 IGLV5-39A0A0G2JS06 123 aa7.57□□□□□ -1.2
SMURF1-203ENST00000472627 C9orf153Q5TBE3 101 aa7.57□□□□□ -1.2
SMURF1-203ENST00000472627 Q8NDZ9 215 aa7.57□□□□□ -1.2
SMURF1-203ENST00000472627 ZNF625Q96I27 306 aaPredicted RBP7.57□□□□□ -1.2
SMURF1-203ENST00000472627 ADCYAP1P18509 176 aa7.56□□□□□ -1.2
SMURF1-203ENST00000472627 SPRR1AP35321 89 aa7.56□□□□□ -1.2
SMURF1-203ENST00000472627 LINC00158P58513 81 aa7.56□□□□□ -1.2
SMURF1-203ENST00000472627 LIMD2Q9BT23 127 aa7.56□□□□□ -1.2
SMURF1-203ENST00000472627 ATP6V1G1O75348 118 aa7.55□□□□□ -1.2
SMURF1-203ENST00000472627 KCNQ1DNQ9H478 68 aa7.55□□□□□ -1.2
SMURF1-203ENST00000472627 C9orf92A6NGG3 77 aa7.54□□□□□ -1.2
SMURF1-203ENST00000472627 C9JQL5 133 aa7.54□□□□□ -1.2
SMURF1-203ENST00000472627 TRAV9-1A0A075B6T8 112 aa7.53□□□□□ -1.2
SMURF1-203ENST00000472627 IGLC3P0DOY3 106 aa7.53□□□□□ -1.2
SMURF1-203ENST00000472627 BOD1L2Q8IYS8 172 aa7.52□□□□□ -1.21
SMURF1-203ENST00000472627 KRTAP4-16G5E9R7 235 aaPredicted RBP7.51□□□□□ -1.21
SMURF1-203ENST00000472627 NCR3O14931 201 aa7.51□□□□□ -1.21
SMURF1-203ENST00000472627 MT-ND4LP03901 98 aa7.5□□□□□ -1.21
SMURF1-203ENST00000472627 CFC1P0CG37 223 aa7.5□□□□□ -1.21
SMURF1-203ENST00000472627 ZNF22P17026 224 aaPredicted RBP7.5□□□□□ -1.21
SMURF1-203ENST00000472627 NDUFA6P56556 154 aa7.5□□□□□ -1.21
SMURF1-203ENST00000472627 ANAPC16Q96DE5 110 aa7.5□□□□□ -1.21
SMURF1-203ENST00000472627 IGLV6-57P01721 117 aa7.49□□□□□ -1.21
SMURF1-203ENST00000472627 SMCO4Q9NRQ5 59 aa7.49□□□□□ -1.21
SMURF1-203ENST00000472627 A0A0U1RRA0 63 aa7.48□□□□□ -1.21
SMURF1-203ENST00000472627 B5MCH6 92 aa7.48□□□□□ -1.21
SMURF1-203ENST00000472627 FA2HQ7L5A8 372 aa7.48□□□□□ -1.21
SMURF1-203ENST00000472627 TRBV10-3A0A0K0K1G6 114 aa7.47□□□□□ -1.21
SMURF1-203ENST00000472627 JOSD1Q15040 202 aaPredicted RBP7.47□□□□□ -1.21
SMURF1-203ENST00000472627 USH2AO75445 5202 aa7.47□□□□□ -1.21
SMURF1-203ENST00000472627 ERC2-IT1O76042 136 aa7.46□□□□□ -1.22
SMURF1-203ENST00000472627 TMEM170BQ5T4T1 132 aa7.46□□□□□ -1.22
SMURF1-203ENST00000472627 Q6ZRX8 168 aa7.46□□□□□ -1.22
SMURF1-203ENST00000472627 SSPOA2VEC9 5147 aa7.46□□□□□ -1.22
SMURF1-203ENST00000472627 LINC01546A6NGU7 62 aa7.45□□□□□ -1.22
SMURF1-203ENST00000472627 LINC00587B1AMM8 73 aa7.45□□□□□ -1.22
SMURF1-203ENST00000472627 KIAA1644Q3SXP7 199 aa7.45□□□□□ -1.22
SMURF1-203ENST00000472627 MEIG1Q5JSS6 88 aa7.45□□□□□ -1.22
SMURF1-203ENST00000472627 FLGP20930 4061 aaPredicted RBP7.44□□□□□ -1.22
SMURF1-203ENST00000472627 SLC25A34Q6PIV7 304 aa7.44□□□□□ -1.22
SMURF1-203ENST00000472627 Q9BRP9 147 aa7.43□□□□□ -1.22
SMURF1-203ENST00000472627 SMIM13P0DJ93 91 aa7.42□□□□□ -1.22
SMURF1-203ENST00000472627 DDTP30046 118 aa7.42□□□□□ -1.22
SMURF1-203ENST00000472627 RPL37P61927 97 aaKnown RBP7.42□□□□□ -1.22
SMURF1-203ENST00000472627 MIR7-3HGQ8N6C7 128 aa7.42□□□□□ -1.22
SMURF1-203ENST00000472627 MAP1LC3CQ9BXW4 147 aa7.42□□□□□ -1.22
SMURF1-203ENST00000472627 C5orf52A6NGY3 159 aa7.41□□□□□ -1.22
SMURF1-203ENST00000472627 HRCT1Q6UXD1 115 aa7.41□□□□□ -1.22
SMURF1-203ENST00000472627 HERV-K104P63124 156 aa7.4□□□□□ -1.22
SMURF1-203ENST00000472627 Q6Q795 121 aa7.4□□□□□ -1.22
SMURF1-203ENST00000472627 TRBV10-2A0A0K0K1G8 114 aa7.39□□□□□ -1.23
SMURF1-203ENST00000472627 C11orf86A6NJI1 115 aa7.39□□□□□ -1.23
SMURF1-203ENST00000472627 BAGE3Q86Y29 109 aa7.38□□□□□ -1.23
SMURF1-203ENST00000472627 S100A7L2Q5SY68 101 aa7.37□□□□□ -1.23
SMURF1-203ENST00000472627 HINT1P49773 126 aaPredicted RBP7.36□□□□□ -1.23
SMURF1-203ENST00000472627 LAMTOR3Q9UHA4 124 aa7.36□□□□□ -1.23
SMURF1-203ENST00000472627 FCGBPQ9Y6R7 5405 aaPredicted RBP7.36□□□□□ -1.23
SMURF1-203ENST00000472627 HBDP02042 147 aa7.35□□□□□ -1.23
SMURF1-203ENST00000472627 CD164Q04900 197 aa7.35□□□□□ -1.23
SMURF1-203ENST00000472627 MIEN1Q9BRT3 115 aa7.35□□□□□ -1.23
SMURF1-203ENST00000472627 SPANXB1Q9NS25 103 aaPredicted RBP7.35□□□□□ -1.23
SMURF1-203ENST00000472627 CBY1Q9Y3M2 126 aa7.35□□□□□ -1.23
SMURF1-203ENST00000472627 TRAV23DV6A0A075B6W5 121 aa7.34□□□□□ -1.23
SMURF1-203ENST00000472627 COMMD7Q86VX2 200 aa7.34□□□□□ -1.23
SMURF1-203ENST00000472627 ST20-AS1Q8NBB2 130 aa7.34□□□□□ -1.23
SMURF1-203ENST00000472627 CHTOPQ9Y3Y2 248 aaKnown RBP7.34□□□□□ -1.23
SMURF1-203ENST00000472627 TMEM223A0PJW6 202 aa7.33□□□□□ -1.24
SMURF1-203ENST00000472627 COX19Q49B96 90 aa7.33□□□□□ -1.24
SMURF1-203ENST00000472627 MYMXA0A1B0GTQ4 84 aa7.32□□□□□ -1.24
SMURF1-203ENST00000472627 H7C2G1 150 aa7.31□□□□□ -1.24
SMURF1-203ENST00000472627 ZNF73O43830 326 aaPredicted RBP7.31□□□□□ -1.24
SMURF1-203ENST00000472627 S100PP25815 95 aa7.31□□□□□ -1.24
SMURF1-203ENST00000472627 hCG_2014768A0A024R1R8 64 aa7.3□□□□□ -1.24
SMURF1-203ENST00000472627 SPRR1BP22528 89 aa7.3□□□□□ -1.24
SMURF1-203ENST00000472627 FABP9Q0Z7S8 132 aa7.3□□□□□ -1.24
SMURF1-203ENST00000472627 Q5XG85 94 aa7.3□□□□□ -1.24
SMURF1-203ENST00000472627 PRO1933Q9H354 126 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms