RNA–Protein interactions for RNA: ENST00000471308.5

PCBP4-208, Transcript of poly(rC) binding protein 4, human

TSL 2

Gene PCBP4, Length 2,087 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCBP4-208	ENST00000471308	LINC00643	Q86TS7	51 aa		11.39	□□□□□ -0.59
PCBP4-208	ENST00000471308	F8	P00451	2351 aa		11.39	□□□□□ -0.59
PCBP4-208	ENST00000471308	GAGE2A	Q6NT46	116 aa		11.38	□□□□□ -0.59
PCBP4-208	ENST00000471308		Q8N814	137 aa		11.38	□□□□□ -0.59
PCBP4-208	ENST00000471308	IMUP	Q9GZP8	106 aa		11.38	□□□□□ -0.59
PCBP4-208	ENST00000471308		Q8NDZ9	215 aa		11.37	□□□□□ -0.59
PCBP4-208	ENST00000471308	LINC00526	Q96FQ7	95 aa		11.37	□□□□□ -0.59
PCBP4-208	ENST00000471308	C6orf48	Q9UBA6	75 aa		11.36	□□□□□ -0.59
PCBP4-208	ENST00000471308	SLPI	P03973	132 aa		11.36	□□□□□ -0.59
PCBP4-208	ENST00000471308	C6orf99	Q4VX62	202 aa		11.36	□□□□□ -0.59
PCBP4-208	ENST00000471308	SMCR5	Q8TEV8	140 aa		11.36	□□□□□ -0.59
PCBP4-208	ENST00000471308	C14orf132	Q9NPU4	83 aa		11.36	□□□□□ -0.59
PCBP4-208	ENST00000471308	ZNF561-AS1	K7EIQ3	104 aa		11.34	□□□□□ -0.59
PCBP4-208	ENST00000471308	TMEM256-PLSCR3	K7ERE1	68 aa		11.34	□□□□□ -0.59
PCBP4-208	ENST00000471308	C9orf129	Q5T035	196 aa	Known RBP	11.34	□□□□□ -0.59
PCBP4-208	ENST00000471308	DEFB131B	A0A096LNP1	70 aa		11.33	□□□□□ -0.6
PCBP4-208	ENST00000471308	IGLV6-57	P01721	117 aa		11.33	□□□□□ -0.6
PCBP4-208	ENST00000471308	ESRG	Q1W209	222 aa		11.33	□□□□□ -0.6
PCBP4-208	ENST00000471308	KRTAP26-1	Q6PEX3	210 aa		11.33	□□□□□ -0.6
PCBP4-208	ENST00000471308	C11orf45	Q8TAV5	145 aa		11.33	□□□□□ -0.6
PCBP4-208	ENST00000471308	JMJD7-PLA2G4B	H0Y9G9	81 aa		11.32	□□□□□ -0.6
PCBP4-208	ENST00000471308	LINC01556	Q5JQF7	62 aa		11.32	□□□□□ -0.6
PCBP4-208	ENST00000471308	CMYA5	Q8N3K9	4069 aa		11.32	□□□□□ -0.6
PCBP4-208	ENST00000471308	CAMK2N2	Q96S95	79 aa		11.32	□□□□□ -0.6
PCBP4-208	ENST00000471308	RPL18A	Q02543	176 aa	Known RBP	11.31	□□□□□ -0.6
PCBP4-208	ENST00000471308	LINC00575	Q6W349	94 aa		11.31	□□□□□ -0.6
PCBP4-208	ENST00000471308	C2orf48	Q96LS8	159 aa		11.31	□□□□□ -0.6
PCBP4-208	ENST00000471308	C1orf43	Q9BWL3	253 aa		11.3	□□□□□ -0.6
PCBP4-208	ENST00000471308		F8WDY8	70 aa		11.29	□□□□□ -0.6
PCBP4-208	ENST00000471308	HIGD2B	Q4VC39	106 aa		11.29	□□□□□ -0.6
PCBP4-208	ENST00000471308	DNAH3	Q8TD57	4116 aa		11.28	□□□□□ -0.6
PCBP4-208	ENST00000471308	C15orf56	Q8N910	161 aa		11.28	□□□□□ -0.6
PCBP4-208	ENST00000471308	hADV29S1	A0JD25	119 aa		11.28	□□□□□ -0.6
PCBP4-208	ENST00000471308	ANK2	Q01484	3957 aa		11.27	□□□□□ -0.61
PCBP4-208	ENST00000471308	XAGE1A	Q9HD64	81 aa		11.26	□□□□□ -0.61
PCBP4-208	ENST00000471308	TRAV23DV6	A0A075B6W5	121 aa		11.26	□□□□□ -0.61
PCBP4-208	ENST00000471308		H3BQ85	93 aa		11.26	□□□□□ -0.61
PCBP4-208	ENST00000471308	CCK	P06307	115 aa		11.26	□□□□□ -0.61
PCBP4-208	ENST00000471308	SMIM20	Q8N5G0	67 aa		11.26	□□□□□ -0.61
PCBP4-208	ENST00000471308		Q6ZRU5	148 aa		11.25	□□□□□ -0.61
PCBP4-208	ENST00000471308	DIRC1	Q969H9	104 aa		11.25	□□□□□ -0.61
PCBP4-208	ENST00000471308	TRBV10-3	A0A0K0K1G6	114 aa		11.24	□□□□□ -0.61
PCBP4-208	ENST00000471308	NDUFC2-KCTD14	E9PQ53	114 aa		11.24	□□□□□ -0.61
PCBP4-208	ENST00000471308	FBN1	P35555	2871 aa	Known RBP	11.24	□□□□□ -0.61
PCBP4-208	ENST00000471308	IGKV2D-24	A0A075B6R9	120 aa		11.23	□□□□□ -0.61
PCBP4-208	ENST00000471308	DNAH10OS	P0CZ25	163 aa		11.23	□□□□□ -0.61
PCBP4-208	ENST00000471308	TRAV10	A0A0B4J240	114 aa		11.23	□□□□□ -0.61
PCBP4-208	ENST00000471308	FAM236A	A0A1B0GUQ0	79 aa		11.23	□□□□□ -0.61
PCBP4-208	ENST00000471308	FAM236B	A0A1B0GV22	79 aa		11.23	□□□□□ -0.61
PCBP4-208	ENST00000471308	VPREB1	P12018	145 aa		11.23	□□□□□ -0.61
PCBP4-208	ENST00000471308	LINC00846	Q9NV44	126 aa		11.23	□□□□□ -0.61
PCBP4-208	ENST00000471308	PKD1L1	Q8TDX9	2849 aa		11.22	□□□□□ -0.61
PCBP4-208	ENST00000471308		Q6JHZ5	121 aa		11.22	□□□□□ -0.61
PCBP4-208	ENST00000471308	TRBV7-6	A0A0J9YX20	115 aa		11.21	□□□□□ -0.61
PCBP4-208	ENST00000471308	STAB1	Q9NY15	2570 aa		11.21	□□□□□ -0.62
PCBP4-208	ENST00000471308		M0R378	163 aa		11.2	□□□□□ -0.62
PCBP4-208	ENST00000471308	ZNF73	O43830	326 aa	Predicted RBP	11.2	□□□□□ -0.62
PCBP4-208	ENST00000471308	TENM3	Q9P273	2699 aa		11.2	□□□□□ -0.62
PCBP4-208	ENST00000471308	GHRH	P01286	108 aa		11.19	□□□□□ -0.62
PCBP4-208	ENST00000471308	TM2D3	Q9BRN9	247 aa		11.19	□□□□□ -0.62
PCBP4-208	ENST00000471308	C3orf22	Q8N5N4	141 aa		11.18	□□□□□ -0.62
PCBP4-208	ENST00000471308	UQCRQ	O14949	82 aa		11.18	□□□□□ -0.62
PCBP4-208	ENST00000471308	COX7B	P24311	80 aa		11.18	□□□□□ -0.62
PCBP4-208	ENST00000471308	ELOF1	P60002	83 aa	Known RBP	11.18	□□□□□ -0.62
PCBP4-208	ENST00000471308	SYCN	Q0VAF6	134 aa		11.18	□□□□□ -0.62
PCBP4-208	ENST00000471308	MAST4	O15021	2626 aa		11.17	□□□□□ -0.62
PCBP4-208	ENST00000471308		Q6ZQY7	126 aa		11.17	□□□□□ -0.62
PCBP4-208	ENST00000471308	RBM3	P98179	157 aa	Known RBP	11.16	□□□□□ -0.62
PCBP4-208	ENST00000471308	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	11.16	□□□□□ -0.62
PCBP4-208	ENST00000471308		Q6ZRP5	223 aa		11.15	□□□□□ -0.62
PCBP4-208	ENST00000471308	LAMTOR3	Q9UHA4	124 aa		11.15	□□□□□ -0.62
PCBP4-208	ENST00000471308	LOC110117498	A0A087WWA1	95 aa		11.15	□□□□□ -0.63
PCBP4-208	ENST00000471308	FLNB	O75369	2602 aa	Known RBP	11.14	□□□□□ -0.63
PCBP4-208	ENST00000471308	ATP5EP2	Q5VTU8	51 aa		11.14	□□□□□ -0.63
PCBP4-208	ENST00000471308	LINC00588	Q9Y4M8	146 aa		11.14	□□□□□ -0.63
PCBP4-208	ENST00000471308	HIST1H4A	P62805	103 aa	Known RBP	11.13	□□□□□ -0.63
PCBP4-208	ENST00000471308		Q6ZQT0	140 aa		11.13	□□□□□ -0.63
PCBP4-208	ENST00000471308	PDE6G	P18545	87 aa		11.12	□□□□□ -0.63
PCBP4-208	ENST00000471308	BAHCC1	Q9P281	2608 aa		11.12	□□□□□ -0.63
PCBP4-208	ENST00000471308	IGKV3D-7	A0A0C4DH55	119 aa		11.12	□□□□□ -0.63
PCBP4-208	ENST00000471308	TLX1NB	P0CAT3	122 aa		11.12	□□□□□ -0.63
PCBP4-208	ENST00000471308	C9orf153	Q5TBE3	101 aa		11.12	□□□□□ -0.63
PCBP4-208	ENST00000471308	RMI2	Q96E14	147 aa		11.12	□□□□□ -0.63
PCBP4-208	ENST00000471308		K7EIL1	84 aa		11.11	□□□□□ -0.63
PCBP4-208	ENST00000471308	DSCR8	Q96T75	97 aa		11.11	□□□□□ -0.63
PCBP4-208	ENST00000471308	UBL5	Q9BZL1	73 aa		11.1	□□□□□ -0.63
PCBP4-208	ENST00000471308	COX7C	P15954	63 aa		11.1	□□□□□ -0.63
PCBP4-208	ENST00000471308	MRAP	Q8TCY5	172 aa		11.1	□□□□□ -0.63
PCBP4-208	ENST00000471308	ATOX1	O00244	68 aa		11.09	□□□□□ -0.63
PCBP4-208	ENST00000471308	PRB2	P02812	416 aa	Predicted RBP	11.09	□□□□□ -0.63
PCBP4-208	ENST00000471308	LINC00528	Q8N1L1	170 aa		11.09	□□□□□ -0.63
PCBP4-208	ENST00000471308	CRYGA	P11844	174 aa		11.08	□□□□□ -0.63
PCBP4-208	ENST00000471308	NKAPP1	Q8N9T2	125 aa		11.08	□□□□□ -0.63
PCBP4-208	ENST00000471308	UPK3B	Q9BT76	320 aa		11.08	□□□□□ -0.64
PCBP4-208	ENST00000471308	PLA2G2D	Q9UNK4	145 aa		11.07	□□□□□ -0.64
PCBP4-208	ENST00000471308	USP17L23	D6RBM5	183 aa		11.06	□□□□□ -0.64
PCBP4-208	ENST00000471308	KCNQ1DN	Q9H478	68 aa		11.06	□□□□□ -0.64
PCBP4-208	ENST00000471308	RPS28	P62857	69 aa	Known RBP	11.04	□□□□□ -0.64
PCBP4-208	ENST00000471308	NOTCH1	P46531	2555 aa		11.04	□□□□□ -0.64
PCBP4-208	ENST00000471308	TRBV7-4	A0A0J9YYF1	115 aa		11.03	□□□□□ -0.64

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