RNA–Protein interactions for RNA: ENST00000470835.1

LMNA-212, Transcript of lamin A/C, humanhuman

TSL 3

Gene LMNA, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-212ENST00000470835 C3orf79P0CE67 100 aa10.28□□□□□ -0.76
LMNA-212ENST00000470835 TINCRA0A1B0GVN0 87 aa10.27□□□□□ -0.77
LMNA-212ENST00000470835 SYS1-DBNDD2H3BUS1 97 aa10.27□□□□□ -0.77
LMNA-212ENST00000470835 IGLC3P0DOY3 106 aa10.26□□□□□ -0.77
LMNA-212ENST00000470835 RPL28P46779 137 aaKnown RBP10.26□□□□□ -0.77
LMNA-212ENST00000470835 BCE1O60756 84 aa10.25□□□□□ -0.77
LMNA-212ENST00000470835 PET117Q6UWS5 81 aa10.25□□□□□ -0.77
LMNA-212ENST00000470835 COX7B2Q8TF08 81 aa10.25□□□□□ -0.77
LMNA-212ENST00000470835 PMCHL2Q9BQD1 86 aa10.25□□□□□ -0.77
LMNA-212ENST00000470835 C11orf86A6NJI1 115 aa10.24□□□□□ -0.77
LMNA-212ENST00000470835 IGLV5-45A0A087WSX0 123 aa10.23□□□□□ -0.77
LMNA-212ENST00000470835 A0A087X002 238 aa10.23□□□□□ -0.77
LMNA-212ENST00000470835 RPL37AP8A6NKH3 93 aa10.23□□□□□ -0.77
LMNA-212ENST00000470835 TSPAN13O95857 204 aa10.23□□□□□ -0.77
LMNA-212ENST00000470835 LINC00167Q96N53 147 aa10.23□□□□□ -0.77
LMNA-212ENST00000470835 C20orf202A1L168 122 aa10.22□□□□□ -0.77
LMNA-212ENST00000470835 GAGE10A6NGK3 116 aa10.22□□□□□ -0.77
LMNA-212ENST00000470835 DPM2O94777 84 aa10.22□□□□□ -0.77
LMNA-212ENST00000470835 ZNF22P17026 224 aaPredicted RBP10.22□□□□□ -0.77
LMNA-212ENST00000470835 SPINK8P0C7L1 97 aa10.21□□□□□ -0.77
LMNA-212ENST00000470835 TMEM170BQ5T4T1 132 aa10.21□□□□□ -0.77
LMNA-212ENST00000470835 LINC01545Q5VT33 79 aa10.21□□□□□ -0.77
LMNA-212ENST00000470835 MUC2Q02817 5179 aa10.2□□□□□ -0.78
LMNA-212ENST00000470835 H3BRM9 83 aa10.2□□□□□ -0.78
LMNA-212ENST00000470835 IGKCP01834 107 aa10.2□□□□□ -0.78
LMNA-212ENST00000470835 CRYGAP11844 174 aa10.2□□□□□ -0.78
LMNA-212ENST00000470835 PLNP26678 52 aa10.2□□□□□ -0.78
LMNA-212ENST00000470835 NKAPP1Q8N9T2 125 aa10.19□□□□□ -0.78
LMNA-212ENST00000470835 TYMSOSQ8TAI1 123 aa10.19□□□□□ -0.78
LMNA-212ENST00000470835 IGLV5-37A0A075B6J1 123 aa10.18□□□□□ -0.78
LMNA-212ENST00000470835 UBE2AP49459 152 aa10.17□□□□□ -0.78
LMNA-212ENST00000470835 KRTAP13-1Q8IUC0 172 aa10.16□□□□□ -0.78
LMNA-212ENST00000470835 ANAPC11Q9NYG5 84 aa10.16□□□□□ -0.78
LMNA-212ENST00000470835 TMEM223A0PJW6 202 aa10.15□□□□□ -0.78
LMNA-212ENST00000470835 SCGB1D1O95968 90 aa10.15□□□□□ -0.78
LMNA-212ENST00000470835 ATOH7Q8N100 152 aa10.15□□□□□ -0.78
LMNA-212ENST00000470835 IGKV2-28A0A075B6P5 120 aa10.14□□□□□ -0.79
LMNA-212ENST00000470835 IGKV2D-28P01615 120 aa10.14□□□□□ -0.79
LMNA-212ENST00000470835 PFN2P35080 140 aa10.13□□□□□ -0.79
LMNA-212ENST00000470835 AKR1D1P51857 326 aa10.13□□□□□ -0.79
LMNA-212ENST00000470835 HERVK_113P61574 105 aa10.13□□□□□ -0.79
LMNA-212ENST00000470835 KRTAP13-2Q52LG2 175 aa10.13□□□□□ -0.79
LMNA-212ENST00000470835 IGLV5-39A0A0G2JS06 123 aa10.11□□□□□ -0.79
LMNA-212ENST00000470835 A0A0U1RQV1 116 aa10.1□□□□□ -0.79
LMNA-212ENST00000470835 PRLHP81277 87 aa10.1□□□□□ -0.79
LMNA-212ENST00000470835 FAM229BQ4G0N7 80 aa10.1□□□□□ -0.79
LMNA-212ENST00000470835 VPREB1P12018 145 aa10.09□□□□□ -0.79
LMNA-212ENST00000470835 JOSD1Q15040 202 aaPredicted RBP10.09□□□□□ -0.79
LMNA-212ENST00000470835 LEPROTO15243 131 aa10.08□□□□□ -0.8
LMNA-212ENST00000470835 LINC00304Q8N9R0 145 aa10.08□□□□□ -0.8
LMNA-212ENST00000470835 RETNLBQ9BQ08 111 aa10.08□□□□□ -0.8
LMNA-212ENST00000470835 SND1-IT1Q9HBX3 110 aa10.08□□□□□ -0.8
LMNA-212ENST00000470835 ERG28Q9UKR5 140 aa10.08□□□□□ -0.8
LMNA-212ENST00000470835 FAM19A1Q7Z5A9 133 aa10.07□□□□□ -0.8
LMNA-212ENST00000470835 PLEKHB2Q96CS7 222 aa10.07□□□□□ -0.8
LMNA-212ENST00000470835 TMEM126AQ9H061 195 aa10.07□□□□□ -0.8
LMNA-212ENST00000470835 TMEM238C9JI98 176 aa10.06□□□□□ -0.8
LMNA-212ENST00000470835 E9PLD3 99 aa10.06□□□□□ -0.8
LMNA-212ENST00000470835 ANKRD39Q53RE8 183 aa10.06□□□□□ -0.8
LMNA-212ENST00000470835 IGKV2D-26A0A0A0MRZ7 120 aa10.05□□□□□ -0.8
LMNA-212ENST00000470835 HSBP1L1C9JCN9 74 aa10.05□□□□□ -0.8
LMNA-212ENST00000470835 LGALS3P17931 250 aaKnown RBP10.05□□□□□ -0.8
LMNA-212ENST00000470835 TSPEAR-AS2P59090 65 aa10.05□□□□□ -0.8
LMNA-212ENST00000470835 RPL24P83731 157 aaKnown RBP10.05□□□□□ -0.8
LMNA-212ENST00000470835 PYY3Q5JQD4 70 aa10.05□□□□□ -0.8
LMNA-212ENST00000470835 ZNF625Q96I27 306 aaPredicted RBP10.05□□□□□ -0.8
LMNA-212ENST00000470835 LOC105371267A0A1B0GV96 52 aa10.04□□□□□ -0.8
LMNA-212ENST00000470835 J3QQQ9 107 aa10.04□□□□□ -0.8
LMNA-212ENST00000470835 COX17Q14061 63 aa10.04□□□□□ -0.8
LMNA-212ENST00000470835 M0R378 163 aa10.03□□□□□ -0.8
LMNA-212ENST00000470835 Q8NDZ9 215 aa10.03□□□□□ -0.8
LMNA-212ENST00000470835 NMUP48645 174 aa10.02□□□□□ -0.81
LMNA-212ENST00000470835 NDUFA12Q9UI09 145 aa10.02□□□□□ -0.81
LMNA-212ENST00000470835 SFTA2Q6UW10 78 aa10.01□□□□□ -0.81
LMNA-212ENST00000470835 VAMP8Q9BV40 100 aa10.01□□□□□ -0.81
LMNA-212ENST00000470835 MYMXA0A1B0GTQ4 84 aa9.99□□□□□ -0.81
LMNA-212ENST00000470835 TTTY13Q9BZ97 58 aa9.99□□□□□ -0.81
LMNA-212ENST00000470835 PAM16Q9Y3D7 125 aa9.99□□□□□ -0.81
LMNA-212ENST00000470835 TPRXLQ17RH7 258 aa9.98□□□□□ -0.81
LMNA-212ENST00000470835 SPATA45Q537H7 98 aa9.98□□□□□ -0.81
LMNA-212ENST00000470835 C3orf22Q8N5N4 141 aa9.98□□□□□ -0.81
LMNA-212ENST00000470835 HIGD2AQ9BW72 106 aa9.98□□□□□ -0.81
LMNA-212ENST00000470835 CDIP1Q9H305 208 aa9.98□□□□□ -0.81
LMNA-212ENST00000470835 IGLV7-46A0A075B6I9 117 aa9.97□□□□□ -0.81
LMNA-212ENST00000470835 ZNF815PA8K554 130 aa9.97□□□□□ -0.81
LMNA-212ENST00000470835 HERV-K104P63124 156 aa9.97□□□□□ -0.81
LMNA-212ENST00000470835 MEIG1Q5JSS6 88 aa9.97□□□□□ -0.81
LMNA-212ENST00000470835 FAT4Q6V0I7 4981 aa9.96□□□□□ -0.81
LMNA-212ENST00000470835 LINC00158P58513 81 aa9.96□□□□□ -0.82
LMNA-212ENST00000470835 CTAG1AP78358 180 aa9.96□□□□□ -0.82
LMNA-212ENST00000470835 PCP2Q8IVA1 136 aa9.96□□□□□ -0.82
LMNA-212ENST00000470835 A0A0U1RRA0 63 aa9.94□□□□□ -0.82
LMNA-212ENST00000470835 SMIM6P0DI80 62 aa9.94□□□□□ -0.82
LMNA-212ENST00000470835 S100A12P80511 92 aa9.93□□□□□ -0.82
LMNA-212ENST00000470835 SPRR4Q96PI1 79 aa9.93□□□□□ -0.82
LMNA-212ENST00000470835 A0A0J9YXY3 114 aa9.92□□□□□ -0.82
LMNA-212ENST00000470835 SMIM13P0DJ93 91 aa9.92□□□□□ -0.82
LMNA-212ENST00000470835 LCE2AQ5TA79 106 aaPredicted RBP9.92□□□□□ -0.82
LMNA-212ENST00000470835 MUC17Q685J3 4493 aa9.92□□□□□ -0.82
LMNA-212ENST00000470835 SCGB1D4Q6XE38 83 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms