RNA–Protein interactions for RNA: ENST00000470503.1

GCFC2-207, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 1 (best) BASIC

Gene GCFC2, Length 1,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-207ENST00000470503 RETNLBQ9BQ08 111 aa11.2□□□□□ -0.62
GCFC2-207ENST00000470503 PRLHP81277 87 aa11.19□□□□□ -0.62
GCFC2-207ENST00000470503 SPAG11AQ6PDA7 123 aa11.19□□□□□ -0.62
GCFC2-207ENST00000470503 C18orf32Q8TCD1 76 aa11.19□□□□□ -0.62
GCFC2-207ENST00000470503 SND1-IT1Q9HBX3 110 aa11.19□□□□□ -0.62
GCFC2-207ENST00000470503 ERG28Q9UKR5 140 aa11.19□□□□□ -0.62
GCFC2-207ENST00000470503 FAT4Q6V0I7 4981 aa11.18□□□□□ -0.62
GCFC2-207ENST00000470503 HBDP02042 147 aa11.17□□□□□ -0.62
GCFC2-207ENST00000470503 PLEKHB2Q96CS7 222 aa11.17□□□□□ -0.62
GCFC2-207ENST00000470503 MUC17Q685J3 4493 aa11.17□□□□□ -0.62
GCFC2-207ENST00000470503 M0R378 163 aa11.16□□□□□ -0.62
GCFC2-207ENST00000470503 CBLN2Q8IUK8 224 aa11.16□□□□□ -0.62
GCFC2-207ENST00000470503 TRAPPC1Q9Y5R8 145 aa11.16□□□□□ -0.62
GCFC2-207ENST00000470503 C11orf86A6NJI1 115 aa11.14□□□□□ -0.63
GCFC2-207ENST00000470503 TMEM238C9JI98 176 aa11.14□□□□□ -0.63
GCFC2-207ENST00000470503 PMCHL1Q16048 86 aa11.14□□□□□ -0.63
GCFC2-207ENST00000470503 BAGE3Q86Y29 109 aa11.14□□□□□ -0.63
GCFC2-207ENST00000470503 Q8NDZ9 215 aa11.14□□□□□ -0.63
GCFC2-207ENST00000470503 ZNF625Q96I27 306 aaPredicted RBP11.14□□□□□ -0.63
GCFC2-207ENST00000470503 PPDPFQ9H3Y8 114 aa11.13□□□□□ -0.63
GCFC2-207ENST00000470503 TMEM170BQ5T4T1 132 aa11.12□□□□□ -0.63
GCFC2-207ENST00000470503 FP248Q71RG6 208 aaPredicted RBP11.12□□□□□ -0.63
GCFC2-207ENST00000470503 ZNF706Q9Y5V0 76 aaPredicted RBP11.11□□□□□ -0.63
GCFC2-207ENST00000470503 C4orf48Q5BLP8 95 aa11.1□□□□□ -0.63
GCFC2-207ENST00000470503 HIGD2AQ9BW72 106 aa11.1□□□□□ -0.63
GCFC2-207ENST00000470503 C3orf22Q8N5N4 141 aa11.09□□□□□ -0.63
GCFC2-207ENST00000470503 SPRR4Q96PI1 79 aa11.08□□□□□ -0.64
GCFC2-207ENST00000470503 CHTOPQ9Y3Y2 248 aaKnown RBP11.08□□□□□ -0.64
GCFC2-207ENST00000470503 SLC7A5P1Q8MH63 180 aa11.07□□□□□ -0.64
GCFC2-207ENST00000470503 LINC00158P58513 81 aa11.06□□□□□ -0.64
GCFC2-207ENST00000470503 TRAV12-1A0A0B4J245 112 aa11.05□□□□□ -0.64
GCFC2-207ENST00000470503 TMEM223A0PJW6 202 aa11.05□□□□□ -0.64
GCFC2-207ENST00000470503 LINC00337Q8N6G1 96 aa11.04□□□□□ -0.64
GCFC2-207ENST00000470503 LCE2BO14633 110 aa11.03□□□□□ -0.64
GCFC2-207ENST00000470503 CHCHD1Q96BP2 118 aaKnown RBP11.03□□□□□ -0.64
GCFC2-207ENST00000470503 YPEL4Q96NS1 127 aa11.03□□□□□ -0.64
GCFC2-207ENST00000470503 PRYO14603 147 aa11.02□□□□□ -0.65
GCFC2-207ENST00000470503 IFI27L1Q96BM0 104 aa11.02□□□□□ -0.65
GCFC2-207ENST00000470503 SPINK1P00995 79 aa11.01□□□□□ -0.65
GCFC2-207ENST00000470503 A0A0U1RRA0 63 aa11□□□□□ -0.65
GCFC2-207ENST00000470503 KRTAP9-6A0A140TA67 174 aa11□□□□□ -0.65
GCFC2-207ENST00000470503 ATP6V1G1O75348 118 aa11□□□□□ -0.65
GCFC2-207ENST00000470503 LINC00587B1AMM8 73 aa10.99□□□□□ -0.65
GCFC2-207ENST00000470503 SMIM13P0DJ93 91 aa10.99□□□□□ -0.65
GCFC2-207ENST00000470503 SPRR1AP35321 89 aa10.99□□□□□ -0.65
GCFC2-207ENST00000470503 KCNQ1DNQ9H478 68 aa10.99□□□□□ -0.65
GCFC2-207ENST00000470503 ASB16-AS1Q495Z4 193 aa10.98□□□□□ -0.65
GCFC2-207ENST00000470503 Q8NBF4 154 aa10.98□□□□□ -0.65
GCFC2-207ENST00000470503 HERV-K104P63124 156 aa10.97□□□□□ -0.65
GCFC2-207ENST00000470503 S100A12P80511 92 aa10.97□□□□□ -0.65
GCFC2-207ENST00000470503 KRTAP13-3Q3SY46 172 aa10.97□□□□□ -0.65
GCFC2-207ENST00000470503 BOD1L2Q8IYS8 172 aa10.97□□□□□ -0.65
GCFC2-207ENST00000470503 MIR7-3HGQ8N6C7 128 aa10.96□□□□□ -0.65
GCFC2-207ENST00000470503 SMCR5Q8TEV8 140 aa10.96□□□□□ -0.65
GCFC2-207ENST00000470503 RPS29P62273 56 aaKnown RBP10.95□□□□□ -0.66
GCFC2-207ENST00000470503 NDUFA12Q9UI09 145 aa10.95□□□□□ -0.66
GCFC2-207ENST00000470503 ETDCA0A1B0GVM5 59 aa10.94□□□□□ -0.66
GCFC2-207ENST00000470503 KRTAP4-16G5E9R7 235 aaPredicted RBP10.94□□□□□ -0.66
GCFC2-207ENST00000470503 SEC61BP60468 96 aaKnown RBP10.94□□□□□ -0.66
GCFC2-207ENST00000470503 LINC00483Q53H64 154 aa10.94□□□□□ -0.66
GCFC2-207ENST00000470503 MEIG1Q5JSS6 88 aa10.94□□□□□ -0.66
GCFC2-207ENST00000470503 FAM19A2Q8N3H0 131 aa10.93□□□□□ -0.66
GCFC2-207ENST00000470503 DAND5Q8N907 189 aa10.93□□□□□ -0.66
GCFC2-207ENST00000470503 LINC01547P58512 204 aaPredicted RBP10.92□□□□□ -0.66
GCFC2-207ENST00000470503 SSBP3-AS1Q7Z2R9 100 aa10.92□□□□□ -0.66
GCFC2-207ENST00000470503 MAP1LC3CQ9BXW4 147 aa10.92□□□□□ -0.66
GCFC2-207ENST00000470503 MYMXA0A1B0GTQ4 84 aa10.91□□□□□ -0.66
GCFC2-207ENST00000470503 NCR3O14931 201 aa10.91□□□□□ -0.66
GCFC2-207ENST00000470503 LOC107984156A0A0G2JMH3 177 aa10.9□□□□□ -0.66
GCFC2-207ENST00000470503 HSBP1O75506 76 aa10.9□□□□□ -0.66
GCFC2-207ENST00000470503 TRGC2P03986 189 aa10.9□□□□□ -0.66
GCFC2-207ENST00000470503 ARL17AQ8IVW1 177 aa10.9□□□□□ -0.66
GCFC2-207ENST00000470503 TRBV10-3A0A0K0K1G6 114 aa10.89□□□□□ -0.67
GCFC2-207ENST00000470503 GAGE2AQ6NT46 116 aa10.88□□□□□ -0.67
GCFC2-207ENST00000470503 TRBV10-2A0A0K0K1G8 114 aa10.86□□□□□ -0.67
GCFC2-207ENST00000470503 COLCA2A8K830 154 aa10.86□□□□□ -0.67
GCFC2-207ENST00000470503 LEPROTO15243 131 aa10.86□□□□□ -0.67
GCFC2-207ENST00000470503 TSPEAR-AS2P59090 65 aa10.86□□□□□ -0.67
GCFC2-207ENST00000470503 B5MCH6 92 aa10.85□□□□□ -0.67
GCFC2-207ENST00000470503 SLC25A20O43772 301 aa10.85□□□□□ -0.67
GCFC2-207ENST00000470503 LEPROTL1O95214 131 aa10.84□□□□□ -0.67
GCFC2-207ENST00000470503 H0Y8G0 127 aa10.83□□□□□ -0.68
GCFC2-207ENST00000470503 LINC00310P59036 64 aa10.83□□□□□ -0.68
GCFC2-207ENST00000470503 MOBPQ13875 183 aa10.83□□□□□ -0.68
GCFC2-207ENST00000470503 Q8N377 158 aa10.83□□□□□ -0.68
GCFC2-207ENST00000470503 PLNP26678 52 aa10.82□□□□□ -0.68
GCFC2-207ENST00000470503 IGLV9-49A0A0B4J1Y8 123 aa10.81□□□□□ -0.68
GCFC2-207ENST00000470503 J3QQQ9 107 aa10.81□□□□□ -0.68
GCFC2-207ENST00000470503 SERF1AO75920 110 aa10.81□□□□□ -0.68
GCFC2-207ENST00000470503 ERC2-IT1O76042 136 aa10.81□□□□□ -0.68
GCFC2-207ENST00000470503 DDTP30046 118 aa10.81□□□□□ -0.68
GCFC2-207ENST00000470503 Q6ZRX8 168 aa10.8□□□□□ -0.68
GCFC2-207ENST00000470503 NMUP48645 174 aa10.79□□□□□ -0.68
GCFC2-207ENST00000470503 JOSD1Q15040 202 aaPredicted RBP10.79□□□□□ -0.68
GCFC2-207ENST00000470503 Q9BRP9 147 aa10.79□□□□□ -0.68
GCFC2-207ENST00000470503 DPM2O94777 84 aa10.78□□□□□ -0.68
GCFC2-207ENST00000470503 NDUFC2O95298 119 aa10.78□□□□□ -0.68
GCFC2-207ENST00000470503 XP32Q5T750 250 aa10.78□□□□□ -0.68
GCFC2-207ENST00000470503 SPANXB1Q9NS25 103 aaPredicted RBP10.78□□□□□ -0.68
GCFC2-207ENST00000470503 HSPB8Q9UJY1 196 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms