RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 CHCHD10Q8WYQ3 142 aaPredicted RBP7.72□□□□□ -1.17
HDAC6-217ENST00000469223 IGKV2D-26A0A0A0MRZ7 120 aa7.71□□□□□ -1.18
HDAC6-217ENST00000469223 IGHV3OR16-9A0A0B4J2B5 98 aa7.71□□□□□ -1.18
HDAC6-217ENST00000469223 HERV-K104P63124 156 aa7.71□□□□□ -1.18
HDAC6-217ENST00000469223 Q6ZRP5 223 aa7.71□□□□□ -1.18
HDAC6-217ENST00000469223 PCP2Q8IVA1 136 aa7.71□□□□□ -1.18
HDAC6-217ENST00000469223 COPS9Q8WXC6 57 aa7.71□□□□□ -1.18
HDAC6-217ENST00000469223 IGLV5-39A0A0G2JS06 123 aa7.7□□□□□ -1.18
HDAC6-217ENST00000469223 SMIM1B2RUZ4 78 aa7.7□□□□□ -1.18
HDAC6-217ENST00000469223 TMEM238C9JI98 176 aa7.7□□□□□ -1.18
HDAC6-217ENST00000469223 CXCL5P42830 114 aa7.7□□□□□ -1.18
HDAC6-217ENST00000469223 NDUFA12Q9UI09 145 aa7.7□□□□□ -1.18
HDAC6-217ENST00000469223 HSD52Q0P140 79 aa7.69□□□□□ -1.18
HDAC6-217ENST00000469223 TAL2Q16559 108 aa7.69□□□□□ -1.18
HDAC6-217ENST00000469223 CFAP161Q6P656 301 aa7.69□□□□□ -1.18
HDAC6-217ENST00000469223 COX7B2Q8TF08 81 aa7.69□□□□□ -1.18
HDAC6-217ENST00000469223 IGLV10-54A0A075B6I4 117 aa7.68□□□□□ -1.18
HDAC6-217ENST00000469223 NDUFA1O15239 70 aa7.68□□□□□ -1.18
HDAC6-217ENST00000469223 CTAG1AP78358 180 aa7.68□□□□□ -1.18
HDAC6-217ENST00000469223 LBHQ53QV2 105 aaPredicted RBP7.68□□□□□ -1.18
HDAC6-217ENST00000469223 C6orf226Q5I0X4 101 aa7.68□□□□□ -1.18
HDAC6-217ENST00000469223 C5orf38Q86SI9 138 aa7.68□□□□□ -1.18
HDAC6-217ENST00000469223 TOMM7Q9P0U1 55 aa7.68□□□□□ -1.18
HDAC6-217ENST00000469223 TMEM238LA0A1B0GVL6 79 aa7.67□□□□□ -1.18
HDAC6-217ENST00000469223 GAGE12HA6NDE8 117 aa7.67□□□□□ -1.18
HDAC6-217ENST00000469223 A6NJY4 79 aa7.67□□□□□ -1.18
HDAC6-217ENST00000469223 CKS1BP61024 79 aa7.67□□□□□ -1.18
HDAC6-217ENST00000469223 Q6ZVH6 145 aa7.67□□□□□ -1.18
HDAC6-217ENST00000469223 Q8IZM0 81 aa7.67□□□□□ -1.18
HDAC6-217ENST00000469223 HIST1H4GQ99525 98 aa7.67□□□□□ -1.18
HDAC6-217ENST00000469223 A0A096LNI7 61 aa7.66□□□□□ -1.18
HDAC6-217ENST00000469223 A6NDN8 102 aa7.65□□□□□ -1.18
HDAC6-217ENST00000469223 KRTAP9-7A8MTY7 169 aa7.65□□□□□ -1.18
HDAC6-217ENST00000469223 TIMM17BO60830 172 aa7.65□□□□□ -1.18
HDAC6-217ENST00000469223 FOXI1Q12951 378 aa7.65□□□□□ -1.18
HDAC6-217ENST00000469223 MEIG1Q5JSS6 88 aa7.65□□□□□ -1.18
HDAC6-217ENST00000469223 ORAOV1Q8WV07 137 aa7.65□□□□□ -1.18
HDAC6-217ENST00000469223 TTTY13Q9BZ97 58 aa7.65□□□□□ -1.18
HDAC6-217ENST00000469223 SPANXB1Q9NS25 103 aaPredicted RBP7.65□□□□□ -1.18
HDAC6-217ENST00000469223 F8WDY8 70 aa7.64□□□□□ -1.19
HDAC6-217ENST00000469223 PTTG1IPP53801 180 aa7.64□□□□□ -1.19
HDAC6-217ENST00000469223 TSPEAR-AS2P59090 65 aa7.64□□□□□ -1.19
HDAC6-217ENST00000469223 C2orf91Q6ZV80 131 aa7.64□□□□□ -1.19
HDAC6-217ENST00000469223 A0A0J9YXY3 114 aa7.63□□□□□ -1.19
HDAC6-217ENST00000469223 ZNF561-AS1K7EIQ3 104 aa7.63□□□□□ -1.19
HDAC6-217ENST00000469223 BATFQ16520 125 aa7.63□□□□□ -1.19
HDAC6-217ENST00000469223 IFITM1P13164 125 aa7.62□□□□□ -1.19
HDAC6-217ENST00000469223 RPL24P83731 157 aaKnown RBP7.62□□□□□ -1.19
HDAC6-217ENST00000469223 SPAG11BQ08648 103 aa7.62□□□□□ -1.19
HDAC6-217ENST00000469223 HINT1P49773 126 aaPredicted RBP7.61□□□□□ -1.19
HDAC6-217ENST00000469223 COL5A1-AS1Q5SY13 56 aa7.61□□□□□ -1.19
HDAC6-217ENST00000469223 CEND1Q8N111 149 aa7.61□□□□□ -1.19
HDAC6-217ENST00000469223 C15orf56Q8N910 161 aa7.61□□□□□ -1.19
HDAC6-217ENST00000469223 ZNF625Q96I27 306 aaPredicted RBP7.61□□□□□ -1.19
HDAC6-217ENST00000469223 TP73-AS1Q9UF72 201 aa7.61□□□□□ -1.19
HDAC6-217ENST00000469223 COX17Q14061 63 aa7.6□□□□□ -1.19
HDAC6-217ENST00000469223 HIGD2BQ4VC39 106 aa7.6□□□□□ -1.19
HDAC6-217ENST00000469223 BVES-AS1Q5T3Y7 98 aa7.6□□□□□ -1.19
HDAC6-217ENST00000469223 SPANXDQ9BXN6 97 aa7.6□□□□□ -1.19
HDAC6-217ENST00000469223 SPANXCQ9NY87 97 aa7.6□□□□□ -1.19
HDAC6-217ENST00000469223 IGLV1-50A0A075B6I6 118 aa7.58□□□□□ -1.2
HDAC6-217ENST00000469223 LINC01547P58512 204 aaPredicted RBP7.58□□□□□ -1.2
HDAC6-217ENST00000469223 LINC00158P58513 81 aa7.58□□□□□ -1.2
HDAC6-217ENST00000469223 C2orf48Q96LS8 159 aa7.58□□□□□ -1.2
HDAC6-217ENST00000469223 SNHG12Q9BXW3 62 aa7.58□□□□□ -1.2
HDAC6-217ENST00000469223 GVQW2A0A096LPI5 108 aaPredicted RBP7.57□□□□□ -1.2
HDAC6-217ENST00000469223 DIRC1Q969H9 104 aa7.57□□□□□ -1.2
HDAC6-217ENST00000469223 CAMK2N2Q96S95 79 aa7.57□□□□□ -1.2
HDAC6-217ENST00000469223 PPDPFQ9H3Y8 114 aa7.57□□□□□ -1.2
HDAC6-217ENST00000469223 LINC00474Q9P2X8 69 aa7.57□□□□□ -1.2
HDAC6-217ENST00000469223 ERG28Q9UKR5 140 aa7.57□□□□□ -1.2
HDAC6-217ENST00000469223 PKIGQ9Y2B9 76 aa7.57□□□□□ -1.2
HDAC6-217ENST00000469223 TRBV30A0A0K0K1B3 111 aa7.56□□□□□ -1.2
HDAC6-217ENST00000469223 C1orf137Q5JT78 98 aa7.56□□□□□ -1.2
HDAC6-217ENST00000469223 TSPAN13O95857 204 aa7.55□□□□□ -1.2
HDAC6-217ENST00000469223 SMIM13P0DJ93 91 aa7.55□□□□□ -1.2
HDAC6-217ENST00000469223 KIAA0087Q14695 138 aa7.55□□□□□ -1.2
HDAC6-217ENST00000469223 H0Y9J4 135 aa7.54□□□□□ -1.2
HDAC6-217ENST00000469223 RAB37Q96AX2 223 aa7.54□□□□□ -1.2
HDAC6-217ENST00000469223 NHP2Q9NX24 153 aaKnown RBP7.54□□□□□ -1.2
HDAC6-217ENST00000469223 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.53□□□□□ -1.2
HDAC6-217ENST00000469223 KRTAP1-4P0C5Y4 121 aa7.53□□□□□ -1.2
HDAC6-217ENST00000469223 PFN2P35080 140 aa7.53□□□□□ -1.2
HDAC6-217ENST00000469223 C2orf82Q6UX34 121 aa7.53□□□□□ -1.2
HDAC6-217ENST00000469223 MUSTN1Q8IVN3 82 aa7.53□□□□□ -1.2
HDAC6-217ENST00000469223 LITAFQ99732 161 aa7.53□□□□□ -1.2
HDAC6-217ENST00000469223 A0A0U1RRA0 63 aa7.52□□□□□ -1.21
HDAC6-217ENST00000469223 FXYD2P54710 66 aa7.52□□□□□ -1.21
HDAC6-217ENST00000469223 SYCNQ0VAF6 134 aa7.52□□□□□ -1.21
HDAC6-217ENST00000469223 MIR7-3HGQ8N6C7 128 aa7.52□□□□□ -1.21
HDAC6-217ENST00000469223 LINC00308Q8TCZ7 52 aa7.52□□□□□ -1.21
HDAC6-217ENST00000469223 RPL13AP40429 203 aaKnown RBP7.51□□□□□ -1.21
HDAC6-217ENST00000469223 RNF151Q2KHN1 245 aa7.51□□□□□ -1.21
HDAC6-217ENST00000469223 CARD19Q96LW7 228 aa7.51□□□□□ -1.21
HDAC6-217ENST00000469223 CDIP1Q9H305 208 aa7.51□□□□□ -1.21
HDAC6-217ENST00000469223 A0A0B4J2C4 111 aa7.5□□□□□ -1.21
HDAC6-217ENST00000469223 A4D1N5 150 aa7.5□□□□□ -1.21
HDAC6-217ENST00000469223 IGLV7-43P04211 117 aa7.5□□□□□ -1.21
HDAC6-217ENST00000469223 ADAMTSL4-AS1Q5T5F5 129 aa7.5□□□□□ -1.21
HDAC6-217ENST00000469223 LYRM7Q5U5X0 104 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms