RNA–Protein interactions for RNA: ENST00000468380.1

LINC00888-201, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 1,241 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-201ENST00000468380 AKAP14Q86UN6 197 aa10.27□□□□□ -0.77
LINC00888-201ENST00000468380 MRPL18Q9H0U6 180 aaKnown RBP10.27□□□□□ -0.77
LINC00888-201ENST00000468380 IGLV5-39A0A0G2JS06 123 aa10.26□□□□□ -0.77
LINC00888-201ENST00000468380 SMCR5Q8TEV8 140 aa10.26□□□□□ -0.77
LINC00888-201ENST00000468380 ZNF625Q96I27 306 aaPredicted RBP10.26□□□□□ -0.77
LINC00888-201ENST00000468380 NDUFA12Q9UI09 145 aa10.25□□□□□ -0.77
LINC00888-201ENST00000468380 COX17Q14061 63 aa10.23□□□□□ -0.77
LINC00888-201ENST00000468380 PMVKQ15126 192 aa10.23□□□□□ -0.77
LINC00888-201ENST00000468380 KIAA1644Q3SXP7 199 aa10.23□□□□□ -0.77
LINC00888-201ENST00000468380 LINC00483Q53H64 154 aa10.23□□□□□ -0.77
LINC00888-201ENST00000468380 H3BRM9 83 aa10.22□□□□□ -0.77
LINC00888-201ENST00000468380 RPS29P62273 56 aaKnown RBP10.22□□□□□ -0.77
LINC00888-201ENST00000468380 SLC25A20O43772 301 aa10.21□□□□□ -0.77
LINC00888-201ENST00000468380 PCOTHQ58A44 107 aa10.21□□□□□ -0.77
LINC00888-201ENST00000468380 FAM19A2Q8N3H0 131 aa10.21□□□□□ -0.77
LINC00888-201ENST00000468380 MOBPQ13875 183 aa10.2□□□□□ -0.78
LINC00888-201ENST00000468380 KRTAP4-16G5E9R7 235 aaPredicted RBP10.19□□□□□ -0.78
LINC00888-201ENST00000468380 SPRR1AP35321 89 aa10.19□□□□□ -0.78
LINC00888-201ENST00000468380 GAGE2AQ6NT46 116 aa10.19□□□□□ -0.78
LINC00888-201ENST00000468380 IGLV8-61A0A075B6I0 122 aa10.18□□□□□ -0.78
LINC00888-201ENST00000468380 IGLV9-49A0A0B4J1Y8 123 aa10.18□□□□□ -0.78
LINC00888-201ENST00000468380 LINC01546A6NGU7 62 aa10.18□□□□□ -0.78
LINC00888-201ENST00000468380 KRTAP9-7A8MTY7 169 aa10.18□□□□□ -0.78
LINC00888-201ENST00000468380 IGLC3P0DOY3 106 aa10.18□□□□□ -0.78
LINC00888-201ENST00000468380 SSBP3-AS1Q7Z2R9 100 aa10.18□□□□□ -0.78
LINC00888-201ENST00000468380 ZNF22P17026 224 aaPredicted RBP10.17□□□□□ -0.78
LINC00888-201ENST00000468380 hCG_2014768A0A024R1R8 64 aa10.16□□□□□ -0.78
LINC00888-201ENST00000468380 PRYO14603 147 aa10.16□□□□□ -0.78
LINC00888-201ENST00000468380 ANAPC16Q96DE5 110 aa10.16□□□□□ -0.78
LINC00888-201ENST00000468380 ERC2-IT1O76042 136 aa10.15□□□□□ -0.78
LINC00888-201ENST00000468380 KCNQ1DNQ9H478 68 aa10.15□□□□□ -0.78
LINC00888-201ENST00000468380 LINC01549A6NIU2 74 aa10.14□□□□□ -0.79
LINC00888-201ENST00000468380 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.14□□□□□ -0.79
LINC00888-201ENST00000468380 MT-ND4LP03901 98 aa10.14□□□□□ -0.79
LINC00888-201ENST00000468380 A0A0U1RRA0 63 aa10.13□□□□□ -0.79
LINC00888-201ENST00000468380 LINC00158P58513 81 aa10.13□□□□□ -0.79
LINC00888-201ENST00000468380 ETDCA0A1B0GVM5 59 aa10.11□□□□□ -0.79
LINC00888-201ENST00000468380 FLGP20930 4061 aaPredicted RBP10.11□□□□□ -0.79
LINC00888-201ENST00000468380 NCR3O14931 201 aa10.1□□□□□ -0.79
LINC00888-201ENST00000468380 NDUFA6P56556 154 aa10.1□□□□□ -0.79
LINC00888-201ENST00000468380 M0R2T5 61 aa10.09□□□□□ -0.79
LINC00888-201ENST00000468380 B5MCH6 92 aa10.08□□□□□ -0.8
LINC00888-201ENST00000468380 TRBV10-3A0A0K0K1G6 114 aa10.07□□□□□ -0.8
LINC00888-201ENST00000468380 C11orf86A6NJI1 115 aa10.07□□□□□ -0.8
LINC00888-201ENST00000468380 BOD1L2Q8IYS8 172 aa10.07□□□□□ -0.8
LINC00888-201ENST00000468380 C9orf92A6NGG3 77 aa10.06□□□□□ -0.8
LINC00888-201ENST00000468380 SFTA2Q6UW10 78 aa10.06□□□□□ -0.8
LINC00888-201ENST00000468380 Q9BRP9 147 aa10.06□□□□□ -0.8
LINC00888-201ENST00000468380 A0A096LNJ9 63 aa10.05□□□□□ -0.8
LINC00888-201ENST00000468380 SMIM13P0DJ93 91 aa10.04□□□□□ -0.8
LINC00888-201ENST00000468380 TMEM170BQ5T4T1 132 aa10.04□□□□□ -0.8
LINC00888-201ENST00000468380 FA2HQ7L5A8 372 aa10.04□□□□□ -0.8
LINC00888-201ENST00000468380 SMCO4Q9NRQ5 59 aa10.01□□□□□ -0.81
LINC00888-201ENST00000468380 C9orf153Q5TBE3 101 aa10□□□□□ -0.81
LINC00888-201ENST00000468380 BAGE3Q86Y29 109 aa10□□□□□ -0.81
LINC00888-201ENST00000468380 MIR7-3HGQ8N6C7 128 aa10□□□□□ -0.81
LINC00888-201ENST00000468380 TRAV9-1A0A075B6T8 112 aa9.99□□□□□ -0.81
LINC00888-201ENST00000468380 URB1-AS1Q96HZ7 61 aa9.99□□□□□ -0.81
LINC00888-201ENST00000468380 ATP6V1G1O75348 118 aa9.98□□□□□ -0.81
LINC00888-201ENST00000468380 Q6ZRX8 168 aa9.97□□□□□ -0.81
LINC00888-201ENST00000468380 SSPOA2VEC9 5147 aa9.96□□□□□ -0.81
LINC00888-201ENST00000468380 TMEM223A0PJW6 202 aa9.96□□□□□ -0.82
LINC00888-201ENST00000468380 PMCHL1Q16048 86 aa9.96□□□□□ -0.82
LINC00888-201ENST00000468380 COX6B2Q6YFQ2 88 aa9.95□□□□□ -0.82
LINC00888-201ENST00000468380 MEIG1Q5JSS6 88 aa9.94□□□□□ -0.82
LINC00888-201ENST00000468380 HRCT1Q6UXD1 115 aa9.94□□□□□ -0.82
LINC00888-201ENST00000468380 ST20-AS1Q8NBB2 130 aa9.94□□□□□ -0.82
LINC00888-201ENST00000468380 IGLV6-57P01721 117 aa9.93□□□□□ -0.82
LINC00888-201ENST00000468380 DDTP30046 118 aa9.93□□□□□ -0.82
LINC00888-201ENST00000468380 FABP9Q0Z7S8 132 aa9.93□□□□□ -0.82
LINC00888-201ENST00000468380 S100A12P80511 92 aa9.92□□□□□ -0.82
LINC00888-201ENST00000468380 HBDP02042 147 aa9.91□□□□□ -0.82
LINC00888-201ENST00000468380 LINC00614P0C842 121 aa9.91□□□□□ -0.82
LINC00888-201ENST00000468380 CHTOPQ9Y3Y2 248 aaKnown RBP9.91□□□□□ -0.82
LINC00888-201ENST00000468380 USH2AO75445 5202 aa9.9□□□□□ -0.82
LINC00888-201ENST00000468380 LIMD2Q9BT23 127 aa9.89□□□□□ -0.83
LINC00888-201ENST00000468380 LOC107984156A0A0G2JMH3 177 aa9.88□□□□□ -0.83
LINC00888-201ENST00000468380 TRBV10-2A0A0K0K1G8 114 aa9.88□□□□□ -0.83
LINC00888-201ENST00000468380 ARL17AQ8IVW1 177 aa9.88□□□□□ -0.83
LINC00888-201ENST00000468380 HERV-K104P63124 156 aa9.87□□□□□ -0.83
LINC00888-201ENST00000468380 C18orf32Q8TCD1 76 aa9.87□□□□□ -0.83
LINC00888-201ENST00000468380 RPL37P61927 97 aaKnown RBP9.85□□□□□ -0.83
LINC00888-201ENST00000468380 LINC00587B1AMM8 73 aa9.84□□□□□ -0.83
LINC00888-201ENST00000468380 JOSD1Q15040 202 aaPredicted RBP9.84□□□□□ -0.83
LINC00888-201ENST00000468380 COX19Q49B96 90 aa9.84□□□□□ -0.83
LINC00888-201ENST00000468380 S100PP25815 95 aa9.83□□□□□ -0.84
LINC00888-201ENST00000468380 MAP1LC3CQ9BXW4 147 aa9.82□□□□□ -0.84
LINC00888-201ENST00000468380 SEC11CQ9BY50 192 aa9.82□□□□□ -0.84
LINC00888-201ENST00000468380 MYMXA0A1B0GTQ4 84 aa9.81□□□□□ -0.84
LINC00888-201ENST00000468380 SPRR1BP22528 89 aa9.81□□□□□ -0.84
LINC00888-201ENST00000468380 SPANXB1Q9NS25 103 aaPredicted RBP9.81□□□□□ -0.84
LINC00888-201ENST00000468380 TRAV23DV6A0A075B6W5 121 aa9.8□□□□□ -0.84
LINC00888-201ENST00000468380 TRAV12-1A0A0B4J245 112 aa9.8□□□□□ -0.84
LINC00888-201ENST00000468380 C5orf52A6NGY3 159 aa9.8□□□□□ -0.84
LINC00888-201ENST00000468380 S100A7L2Q5SY68 101 aa9.8□□□□□ -0.84
LINC00888-201ENST00000468380 FCGBPQ9Y6R7 5405 aaPredicted RBP9.79□□□□□ -0.84
LINC00888-201ENST00000468380 ZNF73O43830 326 aaPredicted RBP9.79□□□□□ -0.84
LINC00888-201ENST00000468380 TSPEAR-AS2P59090 65 aa9.79□□□□□ -0.84
LINC00888-201ENST00000468380 KRTAP9-8Q9BYQ0 159 aa9.79□□□□□ -0.84
LINC00888-201ENST00000468380 RPS10P5Q9NQ39 176 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 142.9 ms