RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 LGALS3P17931 250 aaKnown RBP11.91□□□□□ -0.5
USP11-205ENST00000467378 NMUP48645 174 aa11.91□□□□□ -0.5
USP11-205ENST00000467378 RPL37AP61513 92 aaKnown RBP11.91□□□□□ -0.5
USP11-205ENST00000467378 FAM19A5Q7Z5A7 132 aaPredicted RBP11.91□□□□□ -0.5
USP11-205ENST00000467378 AKR1D1P51857 326 aa11.9□□□□□ -0.5
USP11-205ENST00000467378 HNRNPA3P51991 378 aaKnown RBP11.9□□□□□ -0.5
USP11-205ENST00000467378 PHF5AQ7RTV0 110 aaKnown RBP11.9□□□□□ -0.5
USP11-205ENST00000467378 LRP2P98164 4655 aa11.89□□□□□ -0.51
USP11-205ENST00000467378 SMIM13P0DJ93 91 aa11.89□□□□□ -0.51
USP11-205ENST00000467378 MT1HL1P0DM35 61 aa11.89□□□□□ -0.51
USP11-205ENST00000467378 ATOH7Q8N100 152 aa11.89□□□□□ -0.51
USP11-205ENST00000467378 C7orf33Q8WU49 177 aa11.89□□□□□ -0.51
USP11-205ENST00000467378 IGKV2D-26A0A0A0MRZ7 120 aa11.88□□□□□ -0.51
USP11-205ENST00000467378 A0A0U1RRA0 63 aa11.88□□□□□ -0.51
USP11-205ENST00000467378 LINC00158P58513 81 aa11.88□□□□□ -0.51
USP11-205ENST00000467378 MEIG1Q5JSS6 88 aa11.88□□□□□ -0.51
USP11-205ENST00000467378 SND1-IT1Q9HBX3 110 aa11.88□□□□□ -0.51
USP11-205ENST00000467378 LINC00587B1AMM8 73 aa11.86□□□□□ -0.51
USP11-205ENST00000467378 ANKRD39Q53RE8 183 aa11.86□□□□□ -0.51
USP11-205ENST00000467378 M0QXV9 152 aa11.85□□□□□ -0.51
USP11-205ENST00000467378 C22orf24Q9Y442 160 aa11.85□□□□□ -0.51
USP11-205ENST00000467378 A0A0J9YXY3 114 aa11.83□□□□□ -0.52
USP11-205ENST00000467378 MIR7-3HGQ8N6C7 128 aa11.83□□□□□ -0.52
USP11-205ENST00000467378 IGLV5-37A0A075B6J1 123 aa11.82□□□□□ -0.52
USP11-205ENST00000467378 KRTAP11-1Q8IUC1 163 aa11.82□□□□□ -0.52
USP11-205ENST00000467378 TTTY13Q9BZ97 58 aa11.82□□□□□ -0.52
USP11-205ENST00000467378 TP73-AS1Q9UF72 201 aa11.82□□□□□ -0.52
USP11-205ENST00000467378 TMA7Q9Y2S6 64 aaKnown RBP11.82□□□□□ -0.52
USP11-205ENST00000467378 SCGB1D1O95968 90 aa11.81□□□□□ -0.52
USP11-205ENST00000467378 PRR3P79522 188 aaKnown RBP11.8□□□□□ -0.52
USP11-205ENST00000467378 Q8NDZ9 215 aa11.8□□□□□ -0.52
USP11-205ENST00000467378 ZNF815PA8K554 130 aa11.79□□□□□ -0.52
USP11-205ENST00000467378 VPREB1P12018 145 aa11.79□□□□□ -0.52
USP11-205ENST00000467378 PSORS1C2Q9UIG4 136 aa11.79□□□□□ -0.52
USP11-205ENST00000467378 LOC107984156A0A0G2JMH3 177 aa11.78□□□□□ -0.52
USP11-205ENST00000467378 LBHQ53QV2 105 aaPredicted RBP11.78□□□□□ -0.52
USP11-205ENST00000467378 MRPL55Q7Z7F7 128 aaKnown RBP11.78□□□□□ -0.52
USP11-205ENST00000467378 ARL17AQ8IVW1 177 aa11.78□□□□□ -0.52
USP11-205ENST00000467378 DAND5Q8N907 189 aa11.78□□□□□ -0.52
USP11-205ENST00000467378 UBE2BP63146 152 aa11.77□□□□□ -0.53
USP11-205ENST00000467378 RPL24P83731 157 aaKnown RBP11.77□□□□□ -0.53
USP11-205ENST00000467378 ADAMTSL4-AS1Q5T5F5 129 aa11.77□□□□□ -0.53
USP11-205ENST00000467378 LINC00167Q96N53 147 aa11.77□□□□□ -0.53
USP11-205ENST00000467378 TNXBP22105 4242 aa11.76□□□□□ -0.53
USP11-205ENST00000467378 PCP2Q8IVA1 136 aa11.76□□□□□ -0.53
USP11-205ENST00000467378 NKAPP1Q8N9T2 125 aa11.76□□□□□ -0.53
USP11-205ENST00000467378 LITAFQ99732 161 aa11.76□□□□□ -0.53
USP11-205ENST00000467378 TIMM17BO60830 172 aa11.75□□□□□ -0.53
USP11-205ENST00000467378 HSBP1L1C9JCN9 74 aa11.74□□□□□ -0.53
USP11-205ENST00000467378 JOSD1Q15040 202 aaPredicted RBP11.74□□□□□ -0.53
USP11-205ENST00000467378 BOD1L2Q8IYS8 172 aa11.74□□□□□ -0.53
USP11-205ENST00000467378 GAGE10A6NGK3 116 aa11.72□□□□□ -0.53
USP11-205ENST00000467378 C1orf137Q5JT78 98 aa11.72□□□□□ -0.53
USP11-205ENST00000467378 RPL37AP8A6NKH3 93 aa11.71□□□□□ -0.53
USP11-205ENST00000467378 SOSTDC1Q6X4U4 206 aa11.71□□□□□ -0.53
USP11-205ENST00000467378 EIF4EBP3O60516 100 aaPredicted RBP11.7□□□□□ -0.54
USP11-205ENST00000467378 SRSF9Q13242 221 aaKnown RBP eCLIP11.7□□□□□ -0.54
USP11-205ENST00000467378 IGLV1-50A0A075B6I6 118 aa11.69□□□□□ -0.54
USP11-205ENST00000467378 NPC2P61916 151 aa11.69□□□□□ -0.54
USP11-205ENST00000467378 SCGB1D4Q6XE38 83 aa11.69□□□□□ -0.54
USP11-205ENST00000467378 M0R378 163 aa11.68□□□□□ -0.54
USP11-205ENST00000467378 MIEN1Q9BRT3 115 aa11.68□□□□□ -0.54
USP11-205ENST00000467378 IGLV7-43P04211 117 aa11.67□□□□□ -0.54
USP11-205ENST00000467378 LINC00308Q8TCZ7 52 aa11.67□□□□□ -0.54
USP11-205ENST00000467378 IGKV2-28A0A075B6P5 120 aa11.66□□□□□ -0.54
USP11-205ENST00000467378 NCR3O14931 201 aa11.66□□□□□ -0.54
USP11-205ENST00000467378 NDUFC2O95298 119 aa11.66□□□□□ -0.54
USP11-205ENST00000467378 IGKV2D-28P01615 120 aa11.66□□□□□ -0.54
USP11-205ENST00000467378 SPANXDQ9BXN6 97 aa11.66□□□□□ -0.54
USP11-205ENST00000467378 SPANXCQ9NY87 97 aa11.66□□□□□ -0.54
USP11-205ENST00000467378 TMEM238C9JI98 176 aa11.65□□□□□ -0.54
USP11-205ENST00000467378 PYY3Q5JQD4 70 aa11.65□□□□□ -0.54
USP11-205ENST00000467378 SPINK6Q6UWN8 80 aa11.65□□□□□ -0.54
USP11-205ENST00000467378 TRBV10-2A0A0K0K1G8 114 aa11.63□□□□□ -0.55
USP11-205ENST00000467378 BCE1O60756 84 aa11.62□□□□□ -0.55
USP11-205ENST00000467378 COX8AP10176 69 aa11.62□□□□□ -0.55
USP11-205ENST00000467378 SPATA45Q537H7 98 aa11.62□□□□□ -0.55
USP11-205ENST00000467378 SPANXB1Q9NS25 103 aaPredicted RBP11.62□□□□□ -0.55
USP11-205ENST00000467378 PAM16Q9Y3D7 125 aa11.62□□□□□ -0.55
USP11-205ENST00000467378 Q6ZVH6 145 aa11.61□□□□□ -0.55
USP11-205ENST00000467378 VAMP8Q9BV40 100 aa11.61□□□□□ -0.55
USP11-205ENST00000467378 KRTAP9-2Q9BYQ4 174 aa11.61□□□□□ -0.55
USP11-205ENST00000467378 TMEM126AQ9H061 195 aa11.6□□□□□ -0.55
USP11-205ENST00000467378 TRBV10-3A0A0K0K1G6 114 aa11.59□□□□□ -0.55
USP11-205ENST00000467378 DLEU1O43261 78 aa11.59□□□□□ -0.55
USP11-205ENST00000467378 IFITM1P13164 125 aa11.59□□□□□ -0.55
USP11-205ENST00000467378 REG3GQ6UW15 175 aa11.59□□□□□ -0.55
USP11-205ENST00000467378 PPDPFQ9H3Y8 114 aa11.59□□□□□ -0.55
USP11-205ENST00000467378 ZNF861PO60384 105 aa11.58□□□□□ -0.56
USP11-205ENST00000467378 MUSTN1Q8IVN3 82 aa11.58□□□□□ -0.56
USP11-205ENST00000467378 C14orf144Q96I85 54 aa11.58□□□□□ -0.56
USP11-205ENST00000467378 KCNQ1DNQ9H478 68 aa11.58□□□□□ -0.56
USP11-205ENST00000467378 DDTP30046 118 aa11.56□□□□□ -0.56
USP11-205ENST00000467378 KRTAP13-1Q8IUC0 172 aa11.56□□□□□ -0.56
USP11-205ENST00000467378 LINC01600Q96MT4 127 aa11.56□□□□□ -0.56
USP11-205ENST00000467378 PRYO14603 147 aa11.55□□□□□ -0.56
USP11-205ENST00000467378 IGLV6-57P01721 117 aa11.55□□□□□ -0.56
USP11-205ENST00000467378 COPS9Q8WXC6 57 aa11.55□□□□□ -0.56
USP11-205ENST00000467378 DIRC1Q969H9 104 aa11.55□□□□□ -0.56
USP11-205ENST00000467378 H0Y9J4 135 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms