RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 RPL13AP40429 203 aaKnown RBP9.77□□□□□ -0.84
DDX56-208ENST00000467318 MEIG1Q5JSS6 88 aa9.77□□□□□ -0.84
DDX56-208ENST00000467318 ZNF625Q96I27 306 aaPredicted RBP9.77□□□□□ -0.84
DDX56-208ENST00000467318 H3BT86 120 aa9.77□□□□□ -0.85
DDX56-208ENST00000467318 LINC00336Q6ZUF6 198 aa9.77□□□□□ -0.85
DDX56-208ENST00000467318 COX7A2LO14548 114 aa9.76□□□□□ -0.85
DDX56-208ENST00000467318 NPC2P61916 151 aa9.75□□□□□ -0.85
DDX56-208ENST00000467318 COX7B2Q8TF08 81 aa9.75□□□□□ -0.85
DDX56-208ENST00000467318 CFAP161Q6P656 301 aa9.74□□□□□ -0.85
DDX56-208ENST00000467318 A0A087WZ39 114 aa9.74□□□□□ -0.85
DDX56-208ENST00000467318 LRCOL1A6NCL2 159 aa9.74□□□□□ -0.85
DDX56-208ENST00000467318 LST1O00453 97 aa9.74□□□□□ -0.85
DDX56-208ENST00000467318 MALP21145 153 aa9.74□□□□□ -0.85
DDX56-208ENST00000467318 C5orf38Q86SI9 138 aa9.74□□□□□ -0.85
DDX56-208ENST00000467318 C2orf82Q6UX34 121 aa9.73□□□□□ -0.85
DDX56-208ENST00000467318 LINC01561Q8N1V8 128 aa9.73□□□□□ -0.85
DDX56-208ENST00000467318 A0A087WTM6 91 aa9.72□□□□□ -0.85
DDX56-208ENST00000467318 TNP2Q05952 138 aa9.72□□□□□ -0.85
DDX56-208ENST00000467318 C14orf177Q52M58 125 aa9.72□□□□□ -0.85
DDX56-208ENST00000467318 CDIP1Q9H305 208 aa9.72□□□□□ -0.85
DDX56-208ENST00000467318 TRAV13-2A0A0B4J235 113 aa9.71□□□□□ -0.85
DDX56-208ENST00000467318 USP17L23D6RBM5 183 aa9.71□□□□□ -0.85
DDX56-208ENST00000467318 DAND5Q8N907 189 aa9.71□□□□□ -0.85
DDX56-208ENST00000467318 NTN5Q8WTR8 489 aaPredicted RBP9.71□□□□□ -0.86
DDX56-208ENST00000467318 FRAS1Q86XX4 4008 aa9.7□□□□□ -0.86
DDX56-208ENST00000467318 LECT2O14960 151 aa9.7□□□□□ -0.86
DDX56-208ENST00000467318 DNAH17Q9UFH2 4485 aa9.69□□□□□ -0.86
DDX56-208ENST00000467318 C15orf56Q8N910 161 aa9.69□□□□□ -0.86
DDX56-208ENST00000467318 GVQW2A0A096LPI5 108 aaPredicted RBP9.68□□□□□ -0.86
DDX56-208ENST00000467318 Q8N814 137 aa9.68□□□□□ -0.86
DDX56-208ENST00000467318 A0A0U1RRA0 63 aa9.67□□□□□ -0.86
DDX56-208ENST00000467318 SOSTDC1Q6X4U4 206 aa9.67□□□□□ -0.86
DDX56-208ENST00000467318 FAT2Q9NYQ8 4349 aa9.67□□□□□ -0.86
DDX56-208ENST00000467318 ZNF561-AS1K7EIQ3 104 aa9.67□□□□□ -0.86
DDX56-208ENST00000467318 CLEC2BQ92478 149 aa9.67□□□□□ -0.86
DDX56-208ENST00000467318 TRACP01848 142 aa9.66□□□□□ -0.86
DDX56-208ENST00000467318 TOMM7Q9P0U1 55 aa9.66□□□□□ -0.86
DDX56-208ENST00000467318 A0A1B0GV72 72 aa9.64□□□□□ -0.87
DDX56-208ENST00000467318 LINC00158P58513 81 aa9.64□□□□□ -0.87
DDX56-208ENST00000467318 HIGD2BQ4VC39 106 aa9.64□□□□□ -0.87
DDX56-208ENST00000467318 F8WDY8 70 aa9.64□□□□□ -0.87
DDX56-208ENST00000467318 RPL28P46779 137 aaKnown RBP9.64□□□□□ -0.87
DDX56-208ENST00000467318 SPAG11BQ08648 103 aa9.64□□□□□ -0.87
DDX56-208ENST00000467318 MIR7-3HGQ8N6C7 128 aa9.64□□□□□ -0.87
DDX56-208ENST00000467318 C6orf226Q5I0X4 101 aa9.63□□□□□ -0.87
DDX56-208ENST00000467318 Q8IZM0 81 aa9.63□□□□□ -0.87
DDX56-208ENST00000467318 C2orf48Q96LS8 159 aa9.63□□□□□ -0.87
DDX56-208ENST00000467318 SND1-IT1Q9HBX3 110 aa9.63□□□□□ -0.87
DDX56-208ENST00000467318 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.62□□□□□ -0.87
DDX56-208ENST00000467318 TEX49A0A1B0GTD5 131 aa9.62□□□□□ -0.87
DDX56-208ENST00000467318 FAM240AA0A1B0GVK7 77 aa9.62□□□□□ -0.87
DDX56-208ENST00000467318 FUSP35637 526 aaKnown RBP eCLIP9.62□□□□□ -0.87
DDX56-208ENST00000467318 XGP55808 180 aa9.62□□□□□ -0.87
DDX56-208ENST00000467318 KIAA0087Q14695 138 aa9.62□□□□□ -0.87
DDX56-208ENST00000467318 H0YGX0 51 aa9.61□□□□□ -0.87
DDX56-208ENST00000467318 MT-ATP8P03928 68 aa9.61□□□□□ -0.87
DDX56-208ENST00000467318 CNBPP62633 177 aaKnown RBP9.61□□□□□ -0.87
DDX56-208ENST00000467318 A0A1B0GVY2 172 aa9.61□□□□□ -0.87
DDX56-208ENST00000467318 ACYP1P07311 99 aa9.61□□□□□ -0.87
DDX56-208ENST00000467318 LINC00526Q96FQ7 95 aa9.61□□□□□ -0.87
DDX56-208ENST00000467318 SNCGO76070 127 aa9.6□□□□□ -0.87
DDX56-208ENST00000467318 CXCL5P42830 114 aa9.6□□□□□ -0.87
DDX56-208ENST00000467318 CAMK2N2Q96S95 79 aa9.6□□□□□ -0.87
DDX56-208ENST00000467318 SLPIP03973 132 aa9.59□□□□□ -0.87
DDX56-208ENST00000467318 CKS1BP61024 79 aa9.59□□□□□ -0.87
DDX56-208ENST00000467318 IGLV5-52A0A0A0MRZ9 124 aa9.58□□□□□ -0.88
DDX56-208ENST00000467318 KRTAP10-2P60368 255 aa9.58□□□□□ -0.88
DDX56-208ENST00000467318 SYCNQ0VAF6 134 aa9.58□□□□□ -0.88
DDX56-208ENST00000467318 PKD1P98161 4303 aa9.58□□□□□ -0.88
DDX56-208ENST00000467318 DNAH11Q96DT5 4516 aa9.58□□□□□ -0.88
DDX56-208ENST00000467318 COX17Q14061 63 aa9.58□□□□□ -0.88
DDX56-208ENST00000467318 Q6Q795 121 aa9.58□□□□□ -0.88
DDX56-208ENST00000467318 BAALC-AS2P0C853 105 aa9.57□□□□□ -0.88
DDX56-208ENST00000467318 C9orf163Q8N9P6 203 aa9.57□□□□□ -0.88
DDX56-208ENST00000467318 Q6ZRU5 148 aa9.56□□□□□ -0.88
DDX56-208ENST00000467318 IGKV2-28A0A075B6P5 120 aa9.55□□□□□ -0.88
DDX56-208ENST00000467318 IGKV2D-28P01615 120 aa9.55□□□□□ -0.88
DDX56-208ENST00000467318 GAGE2BQ13066 116 aa9.55□□□□□ -0.88
DDX56-208ENST00000467318 GAGE2EQ4V326 116 aa9.55□□□□□ -0.88
DDX56-208ENST00000467318 LINC00337Q8N6G1 96 aa9.55□□□□□ -0.88
DDX56-208ENST00000467318 GAGE2DQ9UEU5 116 aa9.55□□□□□ -0.88
DDX56-208ENST00000467318 INAFM2P0DMQ5 153 aa9.55□□□□□ -0.88
DDX56-208ENST00000467318 PFN2P35080 140 aa9.55□□□□□ -0.88
DDX56-208ENST00000467318 UNQ6190/PRO20217Q6UXQ8 127 aa9.55□□□□□ -0.88
DDX56-208ENST00000467318 DNAL4O96015 105 aa9.54□□□□□ -0.88
DDX56-208ENST00000467318 C10orf25Q5T742 122 aa9.53□□□□□ -0.88
DDX56-208ENST00000467318 SMIM11BQ8TCY0 68 aa9.53□□□□□ -0.88
DDX56-208ENST00000467318 PKIGQ9Y2B9 76 aa9.53□□□□□ -0.88
DDX56-208ENST00000467318 NDUFC2O95298 119 aa9.52□□□□□ -0.89
DDX56-208ENST00000467318 C6orf48Q9UBA6 75 aa9.51□□□□□ -0.89
DDX56-208ENST00000467318 A0A1B0GX51 115 aa9.51□□□□□ -0.89
DDX56-208ENST00000467318 OR13C6PQ8NH95 151 aa9.51□□□□□ -0.89
DDX56-208ENST00000467318 HECTD4Q9Y4D8 3996 aa9.51□□□□□ -0.89
DDX56-208ENST00000467318 EPPK1P58107 5090 aaKnown RBP9.5□□□□□ -0.89
DDX56-208ENST00000467318 PKHD1P08F94 4074 aa9.5□□□□□ -0.89
DDX56-208ENST00000467318 C16orf90A8MZG2 172 aa9.5□□□□□ -0.89
DDX56-208ENST00000467318 TLX1NBP0CAT3 122 aa9.49□□□□□ -0.89
DDX56-208ENST00000467318 SDIM1Q6ZPB5 146 aa9.49□□□□□ -0.89
DDX56-208ENST00000467318 FAM218AQ96MZ4 157 aa9.49□□□□□ -0.89
DDX56-208ENST00000467318 LOC107984640A0A0U1RRK4 108 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 196.9 ms