RNA–Protein interactions for RNA: ENST00000467308.1

TSSC4-208, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

TSL 3

Gene TSSC4, Length 409 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-208ENST00000467308 SLPIP03973 132 aa9.9□□□□□ -0.82
TSSC4-208ENST00000467308 CHTF8P0CG12 524 aa9.9□□□□□ -0.82
TSSC4-208ENST00000467308 C7orf33Q8WU49 177 aa9.9□□□□□ -0.82
TSSC4-208ENST00000467308 MIEN1Q9BRT3 115 aa9.9□□□□□ -0.82
TSSC4-208ENST00000467308 LINC00587B1AMM8 73 aa9.89□□□□□ -0.83
TSSC4-208ENST00000467308 TIMM17BO60830 172 aa9.89□□□□□ -0.83
TSSC4-208ENST00000467308 HIGD2BQ4VC39 106 aa9.89□□□□□ -0.83
TSSC4-208ENST00000467308 A0A0J9YXY3 114 aa9.88□□□□□ -0.83
TSSC4-208ENST00000467308 TRBV30A0A0K0K1B3 111 aa9.88□□□□□ -0.83
TSSC4-208ENST00000467308 RNF151Q2KHN1 245 aa9.88□□□□□ -0.83
TSSC4-208ENST00000467308 PRO1933Q9H354 126 aa9.88□□□□□ -0.83
TSSC4-208ENST00000467308 HIGD1BQ9P298 99 aa9.88□□□□□ -0.83
TSSC4-208ENST00000467308 C2orf82Q6UX34 121 aa9.87□□□□□ -0.83
TSSC4-208ENST00000467308 CAMK2N2Q96S95 79 aa9.87□□□□□ -0.83
TSSC4-208ENST00000467308 SYCNQ0VAF6 134 aa9.86□□□□□ -0.83
TSSC4-208ENST00000467308 COX17Q14061 63 aa9.86□□□□□ -0.83
TSSC4-208ENST00000467308 UNQ6190/PRO20217Q6UXQ8 127 aa9.86□□□□□ -0.83
TSSC4-208ENST00000467308 SCGB1D4Q6XE38 83 aa9.86□□□□□ -0.83
TSSC4-208ENST00000467308 LINC00526Q96FQ7 95 aa9.86□□□□□ -0.83
TSSC4-208ENST00000467308 PRR3P79522 188 aaKnown RBP9.85□□□□□ -0.83
TSSC4-208ENST00000467308 C10orf25Q5T742 122 aa9.85□□□□□ -0.83
TSSC4-208ENST00000467308 C2orf91Q6ZV80 131 aa9.85□□□□□ -0.83
TSSC4-208ENST00000467308 CARD19Q96LW7 228 aa9.84□□□□□ -0.83
TSSC4-208ENST00000467308 LITAFQ99732 161 aa9.84□□□□□ -0.83
TSSC4-208ENST00000467308 C6orf48Q9UBA6 75 aa9.84□□□□□ -0.83
TSSC4-208ENST00000467308 Q6ZVH6 145 aa9.83□□□□□ -0.84
TSSC4-208ENST00000467308 SPANXB1Q9NS25 103 aaPredicted RBP9.83□□□□□ -0.84
TSSC4-208ENST00000467308 TP73-AS1Q9UF72 201 aa9.83□□□□□ -0.84
TSSC4-208ENST00000467308 ERG28Q9UKR5 140 aa9.83□□□□□ -0.84
TSSC4-208ENST00000467308 TMEM238C9JI98 176 aa9.82□□□□□ -0.84
TSSC4-208ENST00000467308 PPDPFQ9H3Y8 114 aa9.82□□□□□ -0.84
TSSC4-208ENST00000467308 TLX1NBP0CAT3 122 aa9.81□□□□□ -0.84
TSSC4-208ENST00000467308 PTTG1IPP53801 180 aa9.81□□□□□ -0.84
TSSC4-208ENST00000467308 KRTAP10-8P60410 259 aa9.81□□□□□ -0.84
TSSC4-208ENST00000467308 MEIG1Q5JSS6 88 aa9.81□□□□□ -0.84
TSSC4-208ENST00000467308 SPANXDQ9BXN6 97 aa9.81□□□□□ -0.84
TSSC4-208ENST00000467308 SPANXCQ9NY87 97 aa9.81□□□□□ -0.84
TSSC4-208ENST00000467308 DDTP30046 118 aa9.8□□□□□ -0.84
TSSC4-208ENST00000467308 TAL2Q16559 108 aa9.8□□□□□ -0.84
TSSC4-208ENST00000467308 SPINK6Q6UWN8 80 aa9.8□□□□□ -0.84
TSSC4-208ENST00000467308 IGKV2-24A0A0C4DH68 120 aa9.79□□□□□ -0.84
TSSC4-208ENST00000467308 SMIM13P0DJ93 91 aa9.79□□□□□ -0.84
TSSC4-208ENST00000467308 ADAMTSL4-AS1Q5T5F5 129 aa9.79□□□□□ -0.84
TSSC4-208ENST00000467308 REG3GQ6UW15 175 aa9.79□□□□□ -0.84
TSSC4-208ENST00000467308 PKIGQ9Y2B9 76 aa9.79□□□□□ -0.84
TSSC4-208ENST00000467308 LOC107984156A0A0G2JMH3 177 aa9.78□□□□□ -0.84
TSSC4-208ENST00000467308 NDUFC2-KCTD14E9PQ53 114 aa9.78□□□□□ -0.84
TSSC4-208ENST00000467308 IFITM1P13164 125 aa9.78□□□□□ -0.84
TSSC4-208ENST00000467308 LINC00158P58513 81 aa9.78□□□□□ -0.84
TSSC4-208ENST00000467308 C9orf116Q5BN46 136 aaPredicted RBP9.78□□□□□ -0.84
TSSC4-208ENST00000467308 ARL17AQ8IVW1 177 aa9.78□□□□□ -0.84
TSSC4-208ENST00000467308 HSD52Q0P140 79 aa9.77□□□□□ -0.85
TSSC4-208ENST00000467308 COPS9Q8WXC6 57 aa9.77□□□□□ -0.85
TSSC4-208ENST00000467308 LINC00474Q9P2X8 69 aa9.77□□□□□ -0.85
TSSC4-208ENST00000467308 PFN2P35080 140 aa9.76□□□□□ -0.85
TSSC4-208ENST00000467308 SRSF9Q13242 221 aaKnown RBP eCLIP9.76□□□□□ -0.85
TSSC4-208ENST00000467308 MIR7-3HGQ8N6C7 128 aa9.76□□□□□ -0.85
TSSC4-208ENST00000467308 A0A096LNI7 61 aa9.75□□□□□ -0.85
TSSC4-208ENST00000467308 HIST1H4GQ99525 98 aa9.75□□□□□ -0.85
TSSC4-208ENST00000467308 LOC107984640A0A0U1RRK4 108 aa9.74□□□□□ -0.85
TSSC4-208ENST00000467308 LINC00308Q8TCZ7 52 aa9.74□□□□□ -0.85
TSSC4-208ENST00000467308 CTAG1AP78358 180 aa9.73□□□□□ -0.85
TSSC4-208ENST00000467308 SND1-IT1Q9HBX3 110 aa9.73□□□□□ -0.85
TSSC4-208ENST00000467308 A0A0U1RRA0 63 aa9.72□□□□□ -0.85
TSSC4-208ENST00000467308 Q6ZRP5 223 aa9.72□□□□□ -0.85
TSSC4-208ENST00000467308 CEND1Q8N111 149 aa9.72□□□□□ -0.85
TSSC4-208ENST00000467308 DAND5Q8N907 189 aa9.72□□□□□ -0.85
TSSC4-208ENST00000467308 SOSTDC1Q6X4U4 206 aa9.71□□□□□ -0.86
TSSC4-208ENST00000467308 MUSTN1Q8IVN3 82 aa9.71□□□□□ -0.86
TSSC4-208ENST00000467308 M0R143 59 aa9.7□□□□□ -0.86
TSSC4-208ENST00000467308 RPL24P83731 157 aaKnown RBP9.7□□□□□ -0.86
TSSC4-208ENST00000467308 TMEM238LA0A1B0GVL6 79 aa9.68□□□□□ -0.86
TSSC4-208ENST00000467308 A6NJY4 79 aa9.68□□□□□ -0.86
TSSC4-208ENST00000467308 PCP4L1A6NKN8 68 aa9.68□□□□□ -0.86
TSSC4-208ENST00000467308 EIF4EBP3O60516 100 aaPredicted RBP9.68□□□□□ -0.86
TSSC4-208ENST00000467308 NDUFC2O95298 119 aa9.68□□□□□ -0.86
TSSC4-208ENST00000467308 RPL18AQ02543 176 aaKnown RBP9.68□□□□□ -0.86
TSSC4-208ENST00000467308 BVES-AS1Q5T3Y7 98 aa9.68□□□□□ -0.86
TSSC4-208ENST00000467308 LPAP08519 4548 aa9.66□□□□□ -0.86
TSSC4-208ENST00000467308 FXYD2P54710 66 aa9.66□□□□□ -0.86
TSSC4-208ENST00000467308 GAGE2EQ4V326 116 aa9.66□□□□□ -0.86
TSSC4-208ENST00000467308 C9orf129Q5T035 196 aaKnown RBP9.66□□□□□ -0.86
TSSC4-208ENST00000467308 XAGE1AQ9HD64 81 aa9.66□□□□□ -0.86
TSSC4-208ENST00000467308 GAGE2DQ9UEU5 116 aa9.66□□□□□ -0.86
TSSC4-208ENST00000467308 A4D1N5 150 aa9.65□□□□□ -0.86
TSSC4-208ENST00000467308 NPC2P61916 151 aa9.65□□□□□ -0.86
TSSC4-208ENST00000467308 GAGE2BQ13066 116 aa9.65□□□□□ -0.86
TSSC4-208ENST00000467308 A0A1B0GWB2 263 aa9.64□□□□□ -0.87
TSSC4-208ENST00000467308 HINT1P49773 126 aaPredicted RBP9.64□□□□□ -0.87
TSSC4-208ENST00000467308 IGLV5-37A0A075B6J1 123 aa9.63□□□□□ -0.87
TSSC4-208ENST00000467308 A0A0B4J2C4 111 aa9.62□□□□□ -0.87
TSSC4-208ENST00000467308 TRBV10-2A0A0K0K1G8 114 aa9.62□□□□□ -0.87
TSSC4-208ENST00000467308 VPREB1P12018 145 aa9.62□□□□□ -0.87
TSSC4-208ENST00000467308 Q8NDZ9 215 aa9.61□□□□□ -0.87
TSSC4-208ENST00000467308 IGKV2-28A0A075B6P5 120 aa9.6□□□□□ -0.87
TSSC4-208ENST00000467308 A6NDN8 102 aa9.6□□□□□ -0.87
TSSC4-208ENST00000467308 IGKV2D-28P01615 120 aa9.6□□□□□ -0.87
TSSC4-208ENST00000467308 CFC1BP0CG36 223 aa9.6□□□□□ -0.87
TSSC4-208ENST00000467308 CFC1P0CG37 223 aa9.6□□□□□ -0.87
TSSC4-208ENST00000467308 SNHG12Q9BXW3 62 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms