RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, human

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDCCAG3-208	ENST00000466579	DMBT1	Q9UGM3	2413 aa	Predicted RBP	5.83	□□□□□ -1.48
SDCCAG3-208	ENST00000466579	DPM2	O94777	84 aa		5.83	□□□□□ -1.48
SDCCAG3-208	ENST00000466579	C22orf24	Q9Y442	160 aa		5.83	□□□□□ -1.48
SDCCAG3-208	ENST00000466579		H0Y8G0	127 aa		5.82	□□□□□ -1.48
SDCCAG3-208	ENST00000466579	SYS1-DBNDD2	H3BUS1	97 aa		5.82	□□□□□ -1.48
SDCCAG3-208	ENST00000466579	IGKC	P01834	107 aa		5.82	□□□□□ -1.48
SDCCAG3-208	ENST00000466579	SPINK6	Q6UWN8	80 aa		5.82	□□□□□ -1.48
SDCCAG3-208	ENST00000466579	TNXB	P22105	4242 aa		5.81	□□□□□ -1.48
SDCCAG3-208	ENST00000466579	LEPROT	O15243	131 aa		5.81	□□□□□ -1.48
SDCCAG3-208	ENST00000466579	PFN2	P35080	140 aa		5.81	□□□□□ -1.48
SDCCAG3-208	ENST00000466579	HERV-K104	P63124	156 aa		5.81	□□□□□ -1.48
SDCCAG3-208	ENST00000466579	LBH	Q53QV2	105 aa	Predicted RBP	5.81	□□□□□ -1.48
SDCCAG3-208	ENST00000466579	LINC01545	Q5VT33	79 aa		5.81	□□□□□ -1.48
SDCCAG3-208	ENST00000466579	PLEKHB2	Q96CS7	222 aa		5.81	□□□□□ -1.48
SDCCAG3-208	ENST00000466579	SND1-IT1	Q9HBX3	110 aa		5.81	□□□□□ -1.48
SDCCAG3-208	ENST00000466579	TSPEAR-AS2	P59090	65 aa		5.8	□□□□□ -1.48
SDCCAG3-208	ENST00000466579	PET117	Q6UWS5	81 aa		5.8	□□□□□ -1.48
SDCCAG3-208	ENST00000466579	MRPL55	Q7Z7F7	128 aa	Known RBP	5.8	□□□□□ -1.48
SDCCAG3-208	ENST00000466579	PMCHL2	Q9BQD1	86 aa		5.8	□□□□□ -1.48
SDCCAG3-208	ENST00000466579	MYMX	A0A1B0GTQ4	84 aa		5.79	□□□□□ -1.48
SDCCAG3-208	ENST00000466579	IGLV7-43	P04211	117 aa		5.79	□□□□□ -1.48
SDCCAG3-208	ENST00000466579	C3orf79	P0CE67	100 aa		5.79	□□□□□ -1.48
SDCCAG3-208	ENST00000466579	MT1HL1	P0DM35	61 aa		5.79	□□□□□ -1.48
SDCCAG3-208	ENST00000466579	VPREB1	P12018	145 aa		5.79	□□□□□ -1.48
SDCCAG3-208	ENST00000466579	HERVK_113	P61574	105 aa		5.79	□□□□□ -1.48
SDCCAG3-208	ENST00000466579	C1orf137	Q5JT78	98 aa		5.79	□□□□□ -1.48
SDCCAG3-208	ENST00000466579	NDUFA12	Q9UI09	145 aa		5.79	□□□□□ -1.48
SDCCAG3-208	ENST00000466579	LINC00587	B1AMM8	73 aa		5.78	□□□□□ -1.48
SDCCAG3-208	ENST00000466579		E9PLD3	99 aa		5.78	□□□□□ -1.48
SDCCAG3-208	ENST00000466579		J3QQQ9	107 aa		5.78	□□□□□ -1.48
SDCCAG3-208	ENST00000466579	NMU	P48645	174 aa		5.78	□□□□□ -1.48
SDCCAG3-208	ENST00000466579	UBE2B	P63146	152 aa		5.78	□□□□□ -1.48
SDCCAG3-208	ENST00000466579	LINC00167	Q96N53	147 aa		5.78	□□□□□ -1.48
SDCCAG3-208	ENST00000466579	KRTAP9-9	Q9BYP9	154 aa		5.78	□□□□□ -1.48
SDCCAG3-208	ENST00000466579	KRTAP9-4	Q9BYQ2	154 aa		5.78	□□□□□ -1.48
SDCCAG3-208	ENST00000466579	LOC107984156	A0A0G2JMH3	177 aa		5.77	□□□□□ -1.49
SDCCAG3-208	ENST00000466579	SMIM13	P0DJ93	91 aa		5.77	□□□□□ -1.49
SDCCAG3-208	ENST00000466579	ARL17A	Q8IVW1	177 aa		5.77	□□□□□ -1.49
SDCCAG3-208	ENST00000466579		Q8NDZ9	215 aa		5.77	□□□□□ -1.49
SDCCAG3-208	ENST00000466579	LINC01600	Q96MT4	127 aa		5.77	□□□□□ -1.49
SDCCAG3-208	ENST00000466579	LINC00158	P58513	81 aa		5.76	□□□□□ -1.49
SDCCAG3-208	ENST00000466579	RPL24	P83731	157 aa	Known RBP	5.76	□□□□□ -1.49
SDCCAG3-208	ENST00000466579	REG3G	Q6UW15	175 aa		5.76	□□□□□ -1.49
SDCCAG3-208	ENST00000466579	NKAPP1	Q8N9T2	125 aa		5.76	□□□□□ -1.49
SDCCAG3-208	ENST00000466579	IGLV1-50	A0A075B6I6	118 aa		5.75	□□□□□ -1.49
SDCCAG3-208	ENST00000466579	MEIG1	Q5JSS6	88 aa		5.75	□□□□□ -1.49
SDCCAG3-208	ENST00000466579	HIST3H2BB	Q8N257	126 aa		5.75	□□□□□ -1.49
SDCCAG3-208	ENST00000466579	MIR7-3HG	Q8N6C7	128 aa		5.75	□□□□□ -1.49
SDCCAG3-208	ENST00000466579	DIRC1	Q969H9	104 aa		5.75	□□□□□ -1.49
SDCCAG3-208	ENST00000466579		H0Y9J4	135 aa		5.74	□□□□□ -1.49
SDCCAG3-208	ENST00000466579	ZNF861P	O60384	105 aa		5.74	□□□□□ -1.49
SDCCAG3-208	ENST00000466579	BCE1	O60756	84 aa		5.74	□□□□□ -1.49
SDCCAG3-208	ENST00000466579	LGALS3	P17931	250 aa	Known RBP	5.74	□□□□□ -1.49
SDCCAG3-208	ENST00000466579	KRTAP10-8	P60410	259 aa		5.74	□□□□□ -1.49
SDCCAG3-208	ENST00000466579	KRTDAP	P60985	99 aa		5.74	□□□□□ -1.49
SDCCAG3-208	ENST00000466579	KRTAP13-1	Q8IUC0	172 aa		5.74	□□□□□ -1.49
SDCCAG3-208	ENST00000466579		A0A0U1RRA0	63 aa		5.73	□□□□□ -1.49
SDCCAG3-208	ENST00000466579	GAGE10	A6NGK3	116 aa		5.73	□□□□□ -1.49
SDCCAG3-208	ENST00000466579	RPL37AP8	A6NKH3	93 aa		5.73	□□□□□ -1.49
SDCCAG3-208	ENST00000466579	AKR1D1	P51857	326 aa		5.73	□□□□□ -1.49
SDCCAG3-208	ENST00000466579	HIST1H2BL	Q99880	126 aa		5.73	□□□□□ -1.49
SDCCAG3-208	ENST00000466579	IGKV2D-26	A0A0A0MRZ7	120 aa		5.72	□□□□□ -1.49
SDCCAG3-208	ENST00000466579		A0A0J9YXY3	114 aa		5.72	□□□□□ -1.49
SDCCAG3-208	ENST00000466579	C20orf202	A1L168	122 aa		5.72	□□□□□ -1.49
SDCCAG3-208	ENST00000466579		M0R378	163 aa		5.72	□□□□□ -1.49
SDCCAG3-208	ENST00000466579	KRTAP1-4	P0C5Y4	121 aa		5.72	□□□□□ -1.49
SDCCAG3-208	ENST00000466579	KRTAP4-8	A0A0G2JLE6	195 aa		5.71	□□□□□ -1.5
SDCCAG3-208	ENST00000466579	TIMM17B	O60830	172 aa		5.71	□□□□□ -1.5
SDCCAG3-208	ENST00000466579	KRTAP19-1	Q8IUB9	90 aa		5.71	□□□□□ -1.5
SDCCAG3-208	ENST00000466579	BOD1L2	Q8IYS8	172 aa		5.71	□□□□□ -1.5
SDCCAG3-208	ENST00000466579	LITAF	Q99732	161 aa		5.71	□□□□□ -1.5
SDCCAG3-208	ENST00000466579	HMCN2	Q8NDA2	5059 aa		5.71	□□□□□ -1.5
SDCCAG3-208	ENST00000466579	IGKV2-28	A0A075B6P5	120 aa		5.7	□□□□□ -1.5
SDCCAG3-208	ENST00000466579	IGKV2D-28	P01615	120 aa		5.7	□□□□□ -1.5
SDCCAG3-208	ENST00000466579	RPL28	P46779	137 aa	Known RBP	5.7	□□□□□ -1.5
SDCCAG3-208	ENST00000466579	ADAMTSL4-AS1	Q5T5F5	129 aa		5.7	□□□□□ -1.5
SDCCAG3-208	ENST00000466579	TRBV10-2	A0A0K0K1G8	114 aa		5.69	□□□□□ -1.5
SDCCAG3-208	ENST00000466579	C5orf52	A6NGY3	159 aa		5.69	□□□□□ -1.5
SDCCAG3-208	ENST00000466579	NDUFC2	O95298	119 aa		5.69	□□□□□ -1.5
SDCCAG3-208	ENST00000466579	S100A6	P06703	90 aa		5.69	□□□□□ -1.5
SDCCAG3-208	ENST00000466579	SNRPE	P62304	92 aa	Known RBP	5.69	□□□□□ -1.5
SDCCAG3-208	ENST00000466579	ANKRD39	Q53RE8	183 aa		5.69	□□□□□ -1.5
SDCCAG3-208	ENST00000466579	DAND5	Q8N907	189 aa		5.69	□□□□□ -1.5
SDCCAG3-208	ENST00000466579	TMEM126A	Q9H061	195 aa		5.69	□□□□□ -1.5
SDCCAG3-208	ENST00000466579	ZNF815P	A8K554	130 aa		5.68	□□□□□ -1.5
SDCCAG3-208	ENST00000466579	TMEM238	C9JI98	176 aa		5.68	□□□□□ -1.5
SDCCAG3-208	ENST00000466579	S100A2	P29034	98 aa		5.68	□□□□□ -1.5
SDCCAG3-208	ENST00000466579	SPRR1A	P35321	89 aa		5.68	□□□□□ -1.5
SDCCAG3-208	ENST00000466579	SOSTDC1	Q6X4U4	206 aa		5.68	□□□□□ -1.5
SDCCAG3-208	ENST00000466579	TTTY13	Q9BZ97	58 aa		5.68	□□□□□ -1.5
SDCCAG3-208	ENST00000466579	KCNQ1DN	Q9H478	68 aa		5.68	□□□□□ -1.5
SDCCAG3-208	ENST00000466579	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	5.67	□□□□□ -1.5
SDCCAG3-208	ENST00000466579	PRY	O14603	147 aa		5.67	□□□□□ -1.5
SDCCAG3-208	ENST00000466579	EIF4EBP3	O60516	100 aa	Predicted RBP	5.67	□□□□□ -1.5
SDCCAG3-208	ENST00000466579	ATOH7	Q8N100	152 aa		5.67	□□□□□ -1.5
SDCCAG3-208	ENST00000466579	PPDPF	Q9H3Y8	114 aa		5.67	□□□□□ -1.5
SDCCAG3-208	ENST00000466579	SPANXB1	Q9NS25	103 aa	Predicted RBP	5.67	□□□□□ -1.5
SDCCAG3-208	ENST00000466579	TRBV10-3	A0A0K0K1G6	114 aa		5.66	□□□□□ -1.5
SDCCAG3-208	ENST00000466579	NCR3	O14931	201 aa		5.66	□□□□□ -1.5
SDCCAG3-208	ENST00000466579	UBE2A	P49459	152 aa		5.66	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms