RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 IGLV5-37A0A075B6J1 123 aa10.55□□□□□ -0.72
USP39-211ENST00000465282 RPL24P83731 157 aaKnown RBP10.55□□□□□ -0.72
USP39-211ENST00000465282 SERTAD4-AS1Q5TG53 156 aa10.55□□□□□ -0.72
USP39-211ENST00000465282 C22orf24Q9Y442 160 aa10.55□□□□□ -0.72
USP39-211ENST00000465282 INAFM2P0DMQ5 153 aa10.53□□□□□ -0.72
USP39-211ENST00000465282 PRR3P79522 188 aaKnown RBP10.53□□□□□ -0.72
USP39-211ENST00000465282 MRPL55Q7Z7F7 128 aaKnown RBP10.53□□□□□ -0.72
USP39-211ENST00000465282 ATOH7Q8N100 152 aa10.53□□□□□ -0.72
USP39-211ENST00000465282 MIR7-3HGQ8N6C7 128 aa10.53□□□□□ -0.72
USP39-211ENST00000465282 IGKV2D-26A0A0A0MRZ7 120 aa10.52□□□□□ -0.73
USP39-211ENST00000465282 A0A0J9YXY3 114 aa10.52□□□□□ -0.73
USP39-211ENST00000465282 A0A0U1RRA0 63 aa10.52□□□□□ -0.73
USP39-211ENST00000465282 HSBP1L1C9JCN9 74 aa10.52□□□□□ -0.73
USP39-211ENST00000465282 NKAPP1Q8N9T2 125 aa10.52□□□□□ -0.73
USP39-211ENST00000465282 ZNF815PA8K554 130 aa10.51□□□□□ -0.73
USP39-211ENST00000465282 UBE2BP63146 152 aa10.51□□□□□ -0.73
USP39-211ENST00000465282 LOC107984156A0A0G2JMH3 177 aa10.5□□□□□ -0.73
USP39-211ENST00000465282 TIMM17BO60830 172 aa10.5□□□□□ -0.73
USP39-211ENST00000465282 SCGB1D1O95968 90 aa10.5□□□□□ -0.73
USP39-211ENST00000465282 VPREB1P12018 145 aa10.5□□□□□ -0.73
USP39-211ENST00000465282 ANKRD39Q53RE8 183 aa10.5□□□□□ -0.73
USP39-211ENST00000465282 ARL17AQ8IVW1 177 aa10.5□□□□□ -0.73
USP39-211ENST00000465282 PSORS1C2Q9UIG4 136 aa10.5□□□□□ -0.73
USP39-211ENST00000465282 LINC00167Q96N53 147 aa10.48□□□□□ -0.73
USP39-211ENST00000465282 MIEN1Q9BRT3 115 aa10.47□□□□□ -0.73
USP39-211ENST00000465282 BOD1L2Q8IYS8 172 aa10.46□□□□□ -0.73
USP39-211ENST00000465282 C1orf137Q5JT78 98 aa10.45□□□□□ -0.74
USP39-211ENST00000465282 TMA7Q9Y2S6 64 aaKnown RBP10.45□□□□□ -0.74
USP39-211ENST00000465282 M0R378 163 aa10.44□□□□□ -0.74
USP39-211ENST00000465282 ADAMTSL4-AS1Q5T5F5 129 aa10.44□□□□□ -0.74
USP39-211ENST00000465282 SCGB1D4Q6XE38 83 aa10.44□□□□□ -0.74
USP39-211ENST00000465282 KRTAP11-1Q8IUC1 163 aa10.44□□□□□ -0.74
USP39-211ENST00000465282 DAND5Q8N907 189 aa10.44□□□□□ -0.74
USP39-211ENST00000465282 TTTY13Q9BZ97 58 aa10.44□□□□□ -0.74
USP39-211ENST00000465282 NDUFC2O95298 119 aa10.43□□□□□ -0.74
USP39-211ENST00000465282 JOSD1Q15040 202 aaPredicted RBP10.43□□□□□ -0.74
USP39-211ENST00000465282 SPINK6Q6UWN8 80 aa10.43□□□□□ -0.74
USP39-211ENST00000465282 Q8NDZ9 215 aa10.43□□□□□ -0.74
USP39-211ENST00000465282 LITAFQ99732 161 aa10.43□□□□□ -0.74
USP39-211ENST00000465282 PKHD1L1Q86WI1 4243 aa10.43□□□□□ -0.74
USP39-211ENST00000465282 TMEM238C9JI98 176 aa10.42□□□□□ -0.74
USP39-211ENST00000465282 SRSF9Q13242 221 aaKnown RBP eCLIP10.42□□□□□ -0.74
USP39-211ENST00000465282 PCP2Q8IVA1 136 aa10.42□□□□□ -0.74
USP39-211ENST00000465282 IGLV1-50A0A075B6I6 118 aa10.41□□□□□ -0.74
USP39-211ENST00000465282 TRBV10-2A0A0K0K1G8 114 aa10.41□□□□□ -0.74
USP39-211ENST00000465282 GAGE10A6NGK3 116 aa10.41□□□□□ -0.74
USP39-211ENST00000465282 RPL37AP8A6NKH3 93 aa10.41□□□□□ -0.74
USP39-211ENST00000465282 IGLV7-43P04211 117 aa10.41□□□□□ -0.74
USP39-211ENST00000465282 HNRNPA3P51991 378 aaKnown RBP10.41□□□□□ -0.74
USP39-211ENST00000465282 Q6ZVH6 145 aa10.41□□□□□ -0.74
USP39-211ENST00000465282 COPS9Q8WXC6 57 aa10.41□□□□□ -0.74
USP39-211ENST00000465282 SPANXDQ9BXN6 97 aa10.4□□□□□ -0.74
USP39-211ENST00000465282 PPDPFQ9H3Y8 114 aa10.4□□□□□ -0.74
USP39-211ENST00000465282 SPANXCQ9NY87 97 aa10.4□□□□□ -0.74
USP39-211ENST00000465282 FLG2Q5D862 2391 aaPredicted RBP10.4□□□□□ -0.74
USP39-211ENST00000465282 LINC00308Q8TCZ7 52 aa10.39□□□□□ -0.75
USP39-211ENST00000465282 BCE1O60756 84 aa10.38□□□□□ -0.75
USP39-211ENST00000465282 SPANXB1Q9NS25 103 aaPredicted RBP10.38□□□□□ -0.75
USP39-211ENST00000465282 IGKV2-28A0A075B6P5 120 aa10.37□□□□□ -0.75
USP39-211ENST00000465282 IGKV2D-28P01615 120 aa10.37□□□□□ -0.75
USP39-211ENST00000465282 IFITM1P13164 125 aa10.37□□□□□ -0.75
USP39-211ENST00000465282 SOSTDC1Q6X4U4 206 aa10.37□□□□□ -0.75
USP39-211ENST00000465282 OXTP01178 125 aa10.36□□□□□ -0.75
USP39-211ENST00000465282 S100A12P80511 92 aa10.36□□□□□ -0.75
USP39-211ENST00000465282 DIRC1Q969H9 104 aa10.36□□□□□ -0.75
USP39-211ENST00000465282 VAMP8Q9BV40 100 aa10.36□□□□□ -0.75
USP39-211ENST00000465282 NCR3O14931 201 aa10.35□□□□□ -0.75
USP39-211ENST00000465282 DLEU1O43261 78 aa10.35□□□□□ -0.75
USP39-211ENST00000465282 ZNF861PO60384 105 aa10.35□□□□□ -0.75
USP39-211ENST00000465282 COX8AP10176 69 aa10.35□□□□□ -0.75
USP39-211ENST00000465282 NPC2P61916 151 aa10.35□□□□□ -0.75
USP39-211ENST00000465282 REG3GQ6UW15 175 aa10.35□□□□□ -0.75
USP39-211ENST00000465282 MYCBP2O75592 4640 aa10.35□□□□□ -0.75
USP39-211ENST00000465282 KRTAP29-1A8MX34 341 aaPredicted RBP10.34□□□□□ -0.75
USP39-211ENST00000465282 EIF4EBP3O60516 100 aaPredicted RBP10.34□□□□□ -0.75
USP39-211ENST00000465282 RPL28P46779 137 aaKnown RBP10.34□□□□□ -0.75
USP39-211ENST00000465282 TMEM126AQ9H061 195 aa10.34□□□□□ -0.75
USP39-211ENST00000465282 PRYO14603 147 aa10.33□□□□□ -0.76
USP39-211ENST00000465282 LINC00518Q8N0U6 118 aa10.33□□□□□ -0.76
USP39-211ENST00000465282 KCNQ1DNQ9H478 68 aa10.33□□□□□ -0.76
USP39-211ENST00000465282 CBY1Q9Y3M2 126 aa10.33□□□□□ -0.76
USP39-211ENST00000465282 SPATA45Q537H7 98 aa10.32□□□□□ -0.76
USP39-211ENST00000465282 PYY3Q5JQD4 70 aa10.32□□□□□ -0.76
USP39-211ENST00000465282 PAM16Q9Y3D7 125 aa10.32□□□□□ -0.76
USP39-211ENST00000465282 TRBV10-3A0A0K0K1G6 114 aa10.31□□□□□ -0.76
USP39-211ENST00000465282 DDTP30046 118 aa10.31□□□□□ -0.76
USP39-211ENST00000465282 S100A7L2Q5SY68 101 aa10.31□□□□□ -0.76
USP39-211ENST00000465282 H0Y9J4 135 aa10.3□□□□□ -0.76
USP39-211ENST00000465282 IGLV6-57P01721 117 aa10.3□□□□□ -0.76
USP39-211ENST00000465282 UBE2AP49459 152 aa10.3□□□□□ -0.76
USP39-211ENST00000465282 KRTAP13-1Q8IUC0 172 aa10.29□□□□□ -0.76
USP39-211ENST00000465282 LINC00337Q8N6G1 96 aa10.29□□□□□ -0.76
USP39-211ENST00000465282 SPRR1AP35321 89 aa10.28□□□□□ -0.76
USP39-211ENST00000465282 MUSTN1Q8IVN3 82 aa10.28□□□□□ -0.76
USP39-211ENST00000465282 FAM19A1Q7Z5A9 133 aa10.27□□□□□ -0.77
USP39-211ENST00000465282 DMBT1Q9UGM3 2413 aaPredicted RBP10.27□□□□□ -0.77
USP39-211ENST00000465282 SLC25A34Q6PIV7 304 aa10.26□□□□□ -0.77
USP39-211ENST00000465282 C14orf144Q96I85 54 aa10.26□□□□□ -0.77
USP39-211ENST00000465282 LINC01600Q96MT4 127 aa10.26□□□□□ -0.77
USP39-211ENST00000465282 HIGD1BQ9P298 99 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms