RNA–Protein interactions for RNA: ENST00000463411.1

PDLIM7-206, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 1,015 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-206ENST00000463411 GAGE2DQ9UEU5 116 aa13.64□□□□□ -0.23
PDLIM7-206ENST00000463411 CKS1BP61024 79 aa13.63□□□□□ -0.23
PDLIM7-206ENST00000463411 FAM19A5Q7Z5A7 132 aaPredicted RBP13.63□□□□□ -0.23
PDLIM7-206ENST00000463411 LOC105371267A0A1B0GV96 52 aa13.62□□□□□ -0.23
PDLIM7-206ENST00000463411 FAM168BA1KXE4 195 aa13.61□□□□□ -0.23
PDLIM7-206ENST00000463411 HSBP1L1C9JCN9 74 aa13.61□□□□□ -0.23
PDLIM7-206ENST00000463411 J3QQQ9 107 aa13.61□□□□□ -0.23
PDLIM7-206ENST00000463411 NMUP48645 174 aa13.61□□□□□ -0.23
PDLIM7-206ENST00000463411 KRTAP10-8P60410 259 aa13.61□□□□□ -0.23
PDLIM7-206ENST00000463411 ANKRD39Q53RE8 183 aa13.61□□□□□ -0.23
PDLIM7-206ENST00000463411 ZNF625Q96I27 306 aaPredicted RBP13.61□□□□□ -0.23
PDLIM7-206ENST00000463411 TSPEAR-AS2P59090 65 aa13.6□□□□□ -0.23
PDLIM7-206ENST00000463411 C2orf82Q6UX34 121 aa13.6□□□□□ -0.23
PDLIM7-206ENST00000463411 NDUFC2-KCTD14E9PQ53 114 aa13.59□□□□□ -0.23
PDLIM7-206ENST00000463411 UBR4Q5T4S7 5183 aa13.59□□□□□ -0.23
PDLIM7-206ENST00000463411 IGKV2D-26A0A0A0MRZ7 120 aa13.58□□□□□ -0.24
PDLIM7-206ENST00000463411 LGALS3P17931 250 aaKnown RBP13.58□□□□□ -0.24
PDLIM7-206ENST00000463411 NDUFA12Q9UI09 145 aa13.58□□□□□ -0.24
PDLIM7-206ENST00000463411 M0QXV9 152 aa13.57□□□□□ -0.24
PDLIM7-206ENST00000463411 IGLV7-43P04211 117 aa13.57□□□□□ -0.24
PDLIM7-206ENST00000463411 HERV-K104P63124 156 aa13.57□□□□□ -0.24
PDLIM7-206ENST00000463411 MYMXA0A1B0GTQ4 84 aa13.56□□□□□ -0.24
PDLIM7-206ENST00000463411 UBE2BP63146 152 aa13.56□□□□□ -0.24
PDLIM7-206ENST00000463411 DIRC1Q969H9 104 aa13.56□□□□□ -0.24
PDLIM7-206ENST00000463411 VAMP8Q9BV40 100 aa13.54□□□□□ -0.24
PDLIM7-206ENST00000463411 SMIM6P0DI80 62 aa13.52□□□□□ -0.25
PDLIM7-206ENST00000463411 COX17Q14061 63 aa13.51□□□□□ -0.25
PDLIM7-206ENST00000463411 C9orf129Q5T035 196 aaKnown RBP13.51□□□□□ -0.25
PDLIM7-206ENST00000463411 LINC00587B1AMM8 73 aa13.5□□□□□ -0.25
PDLIM7-206ENST00000463411 KRTAP11-1Q8IUC1 163 aa13.5□□□□□ -0.25
PDLIM7-206ENST00000463411 ZNF815PA8K554 130 aa13.49□□□□□ -0.25
PDLIM7-206ENST00000463411 H0Y9J4 135 aa13.49□□□□□ -0.25
PDLIM7-206ENST00000463411 SPATA45Q537H7 98 aa13.49□□□□□ -0.25
PDLIM7-206ENST00000463411 KRTAP7-1Q8IUC3 87 aa13.49□□□□□ -0.25
PDLIM7-206ENST00000463411 ERG28Q9UKR5 140 aa13.49□□□□□ -0.25
PDLIM7-206ENST00000463411 PAM16Q9Y3D7 125 aa13.49□□□□□ -0.25
PDLIM7-206ENST00000463411 PCP2Q8IVA1 136 aa13.47□□□□□ -0.25
PDLIM7-206ENST00000463411 TTTY13Q9BZ97 58 aa13.47□□□□□ -0.25
PDLIM7-206ENST00000463411 A0A0J9YXY3 114 aa13.46□□□□□ -0.25
PDLIM7-206ENST00000463411 COX8AP10176 69 aa13.46□□□□□ -0.25
PDLIM7-206ENST00000463411 S100A12P80511 92 aa13.46□□□□□ -0.25
PDLIM7-206ENST00000463411 DLEU1O43261 78 aa13.45□□□□□ -0.26
PDLIM7-206ENST00000463411 TIMM17BO60830 172 aa13.44□□□□□ -0.26
PDLIM7-206ENST00000463411 MEIG1Q5JSS6 88 aa13.44□□□□□ -0.26
PDLIM7-206ENST00000463411 BOD1L2Q8IYS8 172 aa13.44□□□□□ -0.26
PDLIM7-206ENST00000463411 PRR26Q8N8Z3 221 aa13.43□□□□□ -0.26
PDLIM7-206ENST00000463411 XAGE1AQ9HD64 81 aa13.43□□□□□ -0.26
PDLIM7-206ENST00000463411 LBHQ53QV2 105 aaPredicted RBP13.42□□□□□ -0.26
PDLIM7-206ENST00000463411 SMIM13P0DJ93 91 aa13.41□□□□□ -0.26
PDLIM7-206ENST00000463411 PFN2P35080 140 aa13.41□□□□□ -0.26
PDLIM7-206ENST00000463411 LRP2P98164 4655 aa13.4□□□□□ -0.26
PDLIM7-206ENST00000463411 IGLV1-50A0A075B6I6 118 aa13.4□□□□□ -0.26
PDLIM7-206ENST00000463411 LINC00158P58513 81 aa13.4□□□□□ -0.26
PDLIM7-206ENST00000463411 C22orf24Q9Y442 160 aa13.4□□□□□ -0.26
PDLIM7-206ENST00000463411 SCGB1D4Q6XE38 83 aa13.39□□□□□ -0.27
PDLIM7-206ENST00000463411 LITAFQ99732 161 aa13.39□□□□□ -0.27
PDLIM7-206ENST00000463411 SLC25A34Q6PIV7 304 aa13.38□□□□□ -0.27
PDLIM7-206ENST00000463411 C14orf144Q96I85 54 aa13.38□□□□□ -0.27
PDLIM7-206ENST00000463411 TMEM238C9JI98 176 aa13.36□□□□□ -0.27
PDLIM7-206ENST00000463411 MRPL55Q7Z7F7 128 aaKnown RBP13.36□□□□□ -0.27
PDLIM7-206ENST00000463411 MIR7-3HGQ8N6C7 128 aa13.36□□□□□ -0.27
PDLIM7-206ENST00000463411 SND1-IT1Q9HBX3 110 aa13.36□□□□□ -0.27
PDLIM7-206ENST00000463411 TP73-AS1Q9UF72 201 aa13.36□□□□□ -0.27
PDLIM7-206ENST00000463411 LOC107984156A0A0G2JMH3 177 aa13.35□□□□□ -0.27
PDLIM7-206ENST00000463411 KRTAP1-4P0C5Y4 121 aa13.35□□□□□ -0.27
PDLIM7-206ENST00000463411 RPL13AP40429 203 aaKnown RBP13.35□□□□□ -0.27
PDLIM7-206ENST00000463411 ARL17AQ8IVW1 177 aa13.35□□□□□ -0.27
PDLIM7-206ENST00000463411 A0A0U1RRA0 63 aa13.34□□□□□ -0.27
PDLIM7-206ENST00000463411 ZNF861PO60384 105 aa13.34□□□□□ -0.27
PDLIM7-206ENST00000463411 Q6ZVH6 145 aa13.34□□□□□ -0.27
PDLIM7-206ENST00000463411 C12orf57Q99622 126 aa13.34□□□□□ -0.27
PDLIM7-206ENST00000463411 SPANXDQ9BXN6 97 aa13.34□□□□□ -0.27
PDLIM7-206ENST00000463411 SPANXCQ9NY87 97 aa13.34□□□□□ -0.27
PDLIM7-206ENST00000463411 ADAMTSL4-AS1Q5T5F5 129 aa13.33□□□□□ -0.28
PDLIM7-206ENST00000463411 SPANXB1Q9NS25 103 aaPredicted RBP13.33□□□□□ -0.28
PDLIM7-206ENST00000463411 HIGD1BQ9P298 99 aa13.33□□□□□ -0.28
PDLIM7-206ENST00000463411 PPDPFQ9H3Y8 114 aa13.32□□□□□ -0.28
PDLIM7-206ENST00000463411 LINC00518Q8N0U6 118 aa13.31□□□□□ -0.28
PDLIM7-206ENST00000463411 DAND5Q8N907 189 aa13.3□□□□□ -0.28
PDLIM7-206ENST00000463411 UQCR10Q9UDW1 63 aa13.3□□□□□ -0.28
PDLIM7-206ENST00000463411 IFITM1P13164 125 aa13.29□□□□□ -0.28
PDLIM7-206ENST00000463411 RPL28P46779 137 aaKnown RBP13.29□□□□□ -0.28
PDLIM7-206ENST00000463411 BCE1O60756 84 aa13.28□□□□□ -0.28
PDLIM7-206ENST00000463411 C2orf91Q6ZV80 131 aa13.28□□□□□ -0.28
PDLIM7-206ENST00000463411 NKAPP1Q8N9T2 125 aa13.28□□□□□ -0.28
PDLIM7-206ENST00000463411 COPS9Q8WXC6 57 aa13.28□□□□□ -0.28
PDLIM7-206ENST00000463411 LINC00308Q8TCZ7 52 aa13.27□□□□□ -0.29
PDLIM7-206ENST00000463411 IGLV5-37A0A075B6J1 123 aa13.26□□□□□ -0.29
PDLIM7-206ENST00000463411 SOSTDC1Q6X4U4 206 aa13.26□□□□□ -0.29
PDLIM7-206ENST00000463411 LINC00167Q96N53 147 aa13.26□□□□□ -0.29
PDLIM7-206ENST00000463411 MIEN1Q9BRT3 115 aa13.26□□□□□ -0.29
PDLIM7-206ENST00000463411 RPL37AP8A6NKH3 93 aa13.25□□□□□ -0.29
PDLIM7-206ENST00000463411 RPL24P83731 157 aaKnown RBP13.25□□□□□ -0.29
PDLIM7-206ENST00000463411 GAGE10A6NGK3 116 aa13.24□□□□□ -0.29
PDLIM7-206ENST00000463411 NDUFC2O95298 119 aa13.23□□□□□ -0.29
PDLIM7-206ENST00000463411 VPREB1P12018 145 aa13.23□□□□□ -0.29
PDLIM7-206ENST00000463411 TAL2Q16559 108 aa13.22□□□□□ -0.29
PDLIM7-206ENST00000463411 PRO1933Q9H354 126 aa13.22□□□□□ -0.29
PDLIM7-206ENST00000463411 EIF4EBP3O60516 100 aaPredicted RBP13.21□□□□□ -0.29
PDLIM7-206ENST00000463411 TSTD3H0UI37 97 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms