RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 A0A0J9YXY3 114 aa7.38□□□□□ -1.23
CPNE1-221ENST00000462352 PHF5AQ7RTV0 110 aaKnown RBP7.38□□□□□ -1.23
CPNE1-221ENST00000462352 MIR7-3HGQ8N6C7 128 aa7.38□□□□□ -1.23
CPNE1-221ENST00000462352 C7orf33Q8WU49 177 aa7.38□□□□□ -1.23
CPNE1-221ENST00000462352 ZNF815PA8K554 130 aa7.37□□□□□ -1.23
CPNE1-221ENST00000462352 HSBP1L1C9JCN9 74 aa7.37□□□□□ -1.23
CPNE1-221ENST00000462352 M0QXV9 152 aa7.37□□□□□ -1.23
CPNE1-221ENST00000462352 PLA2G2DQ9UNK4 145 aa7.37□□□□□ -1.23
CPNE1-221ENST00000462352 JOSD1Q15040 202 aaPredicted RBP7.36□□□□□ -1.23
CPNE1-221ENST00000462352 DAND5Q8N907 189 aa7.36□□□□□ -1.23
CPNE1-221ENST00000462352 KRTAP4-5Q9BYR2 181 aa7.36□□□□□ -1.23
CPNE1-221ENST00000462352 C22orf24Q9Y442 160 aa7.36□□□□□ -1.23
CPNE1-221ENST00000462352 VPS13BQ7Z7G8 4022 aa7.36□□□□□ -1.23
CPNE1-221ENST00000462352 PLA2G1BP04054 148 aaKnown RBP7.35□□□□□ -1.23
CPNE1-221ENST00000462352 RPL37AP61513 92 aaKnown RBP7.35□□□□□ -1.23
CPNE1-221ENST00000462352 PCP2Q8IVA1 136 aa7.35□□□□□ -1.23
CPNE1-221ENST00000462352 IGLV5-37A0A075B6J1 123 aa7.34□□□□□ -1.23
CPNE1-221ENST00000462352 KRTAP10-4P60372 401 aaPredicted RBP7.34□□□□□ -1.23
CPNE1-221ENST00000462352 ADAMTSL4-AS1Q5T5F5 129 aa7.34□□□□□ -1.23
CPNE1-221ENST00000462352 TP73-AS1Q9UF72 201 aa7.34□□□□□ -1.23
CPNE1-221ENST00000462352 ABCA13Q86UQ4 5058 aa7.33□□□□□ -1.24
CPNE1-221ENST00000462352 VPREB1P12018 145 aa7.33□□□□□ -1.24
CPNE1-221ENST00000462352 PYY3Q5JQD4 70 aa7.33□□□□□ -1.24
CPNE1-221ENST00000462352 MRPL55Q7Z7F7 128 aaKnown RBP7.33□□□□□ -1.24
CPNE1-221ENST00000462352 NKAPP1Q8N9T2 125 aa7.33□□□□□ -1.24
CPNE1-221ENST00000462352 Q8NDZ9 215 aa7.33□□□□□ -1.24
CPNE1-221ENST00000462352 LITAFQ99732 161 aa7.33□□□□□ -1.24
CPNE1-221ENST00000462352 SRRM2Q9UQ35 2752 aaKnown RBP7.32□□□□□ -1.24
CPNE1-221ENST00000462352 TIMM17BO60830 172 aa7.32□□□□□ -1.24
CPNE1-221ENST00000462352 UBE2BP63146 152 aa7.32□□□□□ -1.24
CPNE1-221ENST00000462352 RPL24P83731 157 aaKnown RBP7.32□□□□□ -1.24
CPNE1-221ENST00000462352 LBHQ53QV2 105 aaPredicted RBP7.32□□□□□ -1.24
CPNE1-221ENST00000462352 SCGB1D4Q6XE38 83 aa7.32□□□□□ -1.24
CPNE1-221ENST00000462352 KRTAP11-1Q8IUC1 163 aa7.32□□□□□ -1.24
CPNE1-221ENST00000462352 BOD1L2Q8IYS8 172 aa7.32□□□□□ -1.24
CPNE1-221ENST00000462352 LOC107984156A0A0G2JMH3 177 aa7.31□□□□□ -1.24
CPNE1-221ENST00000462352 PRR3P79522 188 aaKnown RBP7.31□□□□□ -1.24
CPNE1-221ENST00000462352 ARL17AQ8IVW1 177 aa7.31□□□□□ -1.24
CPNE1-221ENST00000462352 LINC00167Q96N53 147 aa7.31□□□□□ -1.24
CPNE1-221ENST00000462352 GAGE10A6NGK3 116 aa7.3□□□□□ -1.24
CPNE1-221ENST00000462352 NPC2P61916 151 aa7.3□□□□□ -1.24
CPNE1-221ENST00000462352 MIEN1Q9BRT3 115 aa7.3□□□□□ -1.24
CPNE1-221ENST00000462352 VAMP8Q9BV40 100 aa7.3□□□□□ -1.24
CPNE1-221ENST00000462352 PSORS1C2Q9UIG4 136 aa7.3□□□□□ -1.24
CPNE1-221ENST00000462352 PAM16Q9Y3D7 125 aa7.3□□□□□ -1.24
CPNE1-221ENST00000462352 LOC105371267A0A1B0GV96 52 aa7.29□□□□□ -1.24
CPNE1-221ENST00000462352 TMEM238C9JI98 176 aa7.29□□□□□ -1.24
CPNE1-221ENST00000462352 EIF4EBP3O60516 100 aaPredicted RBP7.29□□□□□ -1.24
CPNE1-221ENST00000462352 SPATA45Q537H7 98 aa7.29□□□□□ -1.24
CPNE1-221ENST00000462352 SOSTDC1Q6X4U4 206 aa7.29□□□□□ -1.24
CPNE1-221ENST00000462352 RPL37AP8A6NKH3 93 aa7.28□□□□□ -1.24
CPNE1-221ENST00000462352 LINC00308Q8TCZ7 52 aa7.28□□□□□ -1.24
CPNE1-221ENST00000462352 M0R378 163 aa7.27□□□□□ -1.25
CPNE1-221ENST00000462352 NCR3O14931 201 aa7.27□□□□□ -1.25
CPNE1-221ENST00000462352 COX8AP10176 69 aa7.27□□□□□ -1.25
CPNE1-221ENST00000462352 HNRNPA3P51991 378 aaKnown RBP7.27□□□□□ -1.25
CPNE1-221ENST00000462352 C1orf137Q5JT78 98 aa7.27□□□□□ -1.25
CPNE1-221ENST00000462352 SPANXDQ9BXN6 97 aa7.27□□□□□ -1.25
CPNE1-221ENST00000462352 SPANXCQ9NY87 97 aa7.27□□□□□ -1.25
CPNE1-221ENST00000462352 IGKV2-28A0A075B6P5 120 aa7.26□□□□□ -1.25
CPNE1-221ENST00000462352 NDUFC2O95298 119 aa7.26□□□□□ -1.25
CPNE1-221ENST00000462352 IGKV2D-28P01615 120 aa7.26□□□□□ -1.25
CPNE1-221ENST00000462352 INAFM2P0DMQ5 153 aa7.26□□□□□ -1.25
CPNE1-221ENST00000462352 C14orf144Q96I85 54 aa7.26□□□□□ -1.25
CPNE1-221ENST00000462352 IGLV1-50A0A075B6I6 118 aa7.25□□□□□ -1.25
CPNE1-221ENST00000462352 DLEU1O43261 78 aa7.25□□□□□ -1.25
CPNE1-221ENST00000462352 Q6ZVH6 145 aa7.25□□□□□ -1.25
CPNE1-221ENST00000462352 PCLOQ9Y6V0 5065 aa7.25□□□□□ -1.25
CPNE1-221ENST00000462352 TRBV10-2A0A0K0K1G8 114 aa7.24□□□□□ -1.25
CPNE1-221ENST00000462352 IFITM1P13164 125 aa7.24□□□□□ -1.25
CPNE1-221ENST00000462352 SPANXB1Q9NS25 103 aaPredicted RBP7.24□□□□□ -1.25
CPNE1-221ENST00000462352 IGLV7-43P04211 117 aa7.23□□□□□ -1.25
CPNE1-221ENST00000462352 SMIM6P0DI80 62 aa7.23□□□□□ -1.25
CPNE1-221ENST00000462352 S100A12P80511 92 aa7.23□□□□□ -1.25
CPNE1-221ENST00000462352 MUSTN1Q8IVN3 82 aa7.23□□□□□ -1.25
CPNE1-221ENST00000462352 COPS9Q8WXC6 57 aa7.23□□□□□ -1.25
CPNE1-221ENST00000462352 PKHD1L1Q86WI1 4243 aa7.23□□□□□ -1.25
CPNE1-221ENST00000462352 TRBV10-3A0A0K0K1G6 114 aa7.22□□□□□ -1.25
CPNE1-221ENST00000462352 SRSF9Q13242 221 aaKnown RBP eCLIP7.22□□□□□ -1.25
CPNE1-221ENST00000462352 SLC25A34Q6PIV7 304 aa7.22□□□□□ -1.25
CPNE1-221ENST00000462352 PPDPFQ9H3Y8 114 aa7.22□□□□□ -1.25
CPNE1-221ENST00000462352 BCE1O60756 84 aa7.21□□□□□ -1.26
CPNE1-221ENST00000462352 DDTP30046 118 aa7.21□□□□□ -1.26
CPNE1-221ENST00000462352 REG3GQ6UW15 175 aa7.21□□□□□ -1.26
CPNE1-221ENST00000462352 SPINK6Q6UWN8 80 aa7.21□□□□□ -1.26
CPNE1-221ENST00000462352 TMEM126AQ9H061 195 aa7.21□□□□□ -1.26
CPNE1-221ENST00000462352 S100A7L2Q5SY68 101 aa7.2□□□□□ -1.26
CPNE1-221ENST00000462352 KCNQ1DNQ9H478 68 aa7.2□□□□□ -1.26
CPNE1-221ENST00000462352 FLG2Q5D862 2391 aaPredicted RBP7.2□□□□□ -1.26
CPNE1-221ENST00000462352 PRYO14603 147 aa7.19□□□□□ -1.26
CPNE1-221ENST00000462352 IGLV6-57P01721 117 aa7.19□□□□□ -1.26
CPNE1-221ENST00000462352 C2orf91Q6ZV80 131 aa7.19□□□□□ -1.26
CPNE1-221ENST00000462352 LINC00518Q8N0U6 118 aa7.19□□□□□ -1.26
CPNE1-221ENST00000462352 HIGD1BQ9P298 99 aa7.19□□□□□ -1.26
CPNE1-221ENST00000462352 MYCBP2O75592 4640 aa7.18□□□□□ -1.26
CPNE1-221ENST00000462352 ZNF861PO60384 105 aa7.18□□□□□ -1.26
CPNE1-221ENST00000462352 LINC00337Q8N6G1 96 aa7.18□□□□□ -1.26
CPNE1-221ENST00000462352 HIST1H4GQ99525 98 aa7.18□□□□□ -1.26
CPNE1-221ENST00000462352 LCE2BO14633 110 aa7.17□□□□□ -1.26
CPNE1-221ENST00000462352 SPRR1AP35321 89 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms