RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 LPAP08519 4548 aa6.08□□□□□ -1.44
SF3A3-204ENST00000462258 TRGC2P03986 189 aa6.08□□□□□ -1.44
SF3A3-204ENST00000462258 VPREB1P12018 145 aa6.08□□□□□ -1.44
SF3A3-204ENST00000462258 FAM19A2Q8N3H0 131 aa6.08□□□□□ -1.44
SF3A3-204ENST00000462258 UBE2AP49459 152 aa6.07□□□□□ -1.44
SF3A3-204ENST00000462258 RPL24P83731 157 aaKnown RBP6.07□□□□□ -1.44
SF3A3-204ENST00000462258 RNF213Q63HN8 5207 aa6.07□□□□□ -1.44
SF3A3-204ENST00000462258 H0Y8G0 127 aa6.06□□□□□ -1.44
SF3A3-204ENST00000462258 SERF1AO75920 110 aa6.06□□□□□ -1.44
SF3A3-204ENST00000462258 LINC00310P59036 64 aa6.06□□□□□ -1.44
SF3A3-204ENST00000462258 KRTAP13-1Q8IUC0 172 aa6.06□□□□□ -1.44
SF3A3-204ENST00000462258 SLC7A5P1Q8MH63 180 aa6.06□□□□□ -1.44
SF3A3-204ENST00000462258 Q8NDZ9 215 aa6.06□□□□□ -1.44
SF3A3-204ENST00000462258 A0A0U1RRA0 63 aa6.05□□□□□ -1.44
SF3A3-204ENST00000462258 LEPROTL1O95214 131 aa6.05□□□□□ -1.44
SF3A3-204ENST00000462258 LINC00158P58513 81 aa6.05□□□□□ -1.44
SF3A3-204ENST00000462258 A0A087X002 238 aa6.04□□□□□ -1.44
SF3A3-204ENST00000462258 TMEM238C9JI98 176 aa6.04□□□□□ -1.44
SF3A3-204ENST00000462258 PRLHP81277 87 aa6.04□□□□□ -1.44
SF3A3-204ENST00000462258 MEIG1Q5JSS6 88 aa6.04□□□□□ -1.44
SF3A3-204ENST00000462258 TMEM126AQ9H061 195 aa6.04□□□□□ -1.44
SF3A3-204ENST00000462258 GHRHP01286 108 aa6.03□□□□□ -1.44
SF3A3-204ENST00000462258 SMIM13P0DJ93 91 aa6.03□□□□□ -1.44
SF3A3-204ENST00000462258 FAM19A1Q7Z5A9 133 aa6.03□□□□□ -1.44
SF3A3-204ENST00000462258 COLCA2A8K830 154 aa6.02□□□□□ -1.45
SF3A3-204ENST00000462258 M0R378 163 aa6.02□□□□□ -1.45
SF3A3-204ENST00000462258 ATP6V1G1O75348 118 aa6.02□□□□□ -1.45
SF3A3-204ENST00000462258 CRYGAP11844 174 aa6.02□□□□□ -1.45
SF3A3-204ENST00000462258 PLNP26678 52 aa6.02□□□□□ -1.45
SF3A3-204ENST00000462258 HERV-K104P63124 156 aa6.02□□□□□ -1.45
SF3A3-204ENST00000462258 NDUFA12Q9UI09 145 aa6.02□□□□□ -1.45
SF3A3-204ENST00000462258 HSPB8Q9UJY1 196 aa6.02□□□□□ -1.45
SF3A3-204ENST00000462258 MYMXA0A1B0GTQ4 84 aa6.01□□□□□ -1.45
SF3A3-204ENST00000462258 FABP4P15090 132 aa6.01□□□□□ -1.45
SF3A3-204ENST00000462258 TSPEAR-AS2P59090 65 aa6.01□□□□□ -1.45
SF3A3-204ENST00000462258 MIR7-3HGQ8N6C7 128 aa6.01□□□□□ -1.45
SF3A3-204ENST00000462258 LINC00587B1AMM8 73 aa6□□□□□ -1.45
SF3A3-204ENST00000462258 NCR3O14931 201 aa6□□□□□ -1.45
SF3A3-204ENST00000462258 DPM2O94777 84 aa6□□□□□ -1.45
SF3A3-204ENST00000462258 BOD1L2Q8IYS8 172 aa6□□□□□ -1.45
SF3A3-204ENST00000462258 TYMSOSQ8TAI1 123 aa6□□□□□ -1.45
SF3A3-204ENST00000462258 ANAPC11Q9NYG5 84 aa6□□□□□ -1.45
SF3A3-204ENST00000462258 LEPROTO15243 131 aa5.99□□□□□ -1.45
SF3A3-204ENST00000462258 IGKCP01834 107 aa5.99□□□□□ -1.45
SF3A3-204ENST00000462258 HERVK_113P61574 105 aa5.99□□□□□ -1.45
SF3A3-204ENST00000462258 FAM229BQ4G0N7 80 aa5.99□□□□□ -1.45
SF3A3-204ENST00000462258 PLEKHB2Q96CS7 222 aa5.99□□□□□ -1.45
SF3A3-204ENST00000462258 PMCHL2Q9BQD1 86 aa5.99□□□□□ -1.45
SF3A3-204ENST00000462258 MAP1LC3CQ9BXW4 147 aa5.99□□□□□ -1.45
SF3A3-204ENST00000462258 J3QQQ9 107 aa5.98□□□□□ -1.45
SF3A3-204ENST00000462258 PRYO14603 147 aa5.98□□□□□ -1.45
SF3A3-204ENST00000462258 PRR4Q16378 134 aa5.98□□□□□ -1.45
SF3A3-204ENST00000462258 KRTAP13-2Q52LG2 175 aa5.98□□□□□ -1.45
SF3A3-204ENST00000462258 HIGD2AQ9BW72 106 aa5.98□□□□□ -1.45
SF3A3-204ENST00000462258 IGKV2D-26A0A0A0MRZ7 120 aa5.97□□□□□ -1.45
SF3A3-204ENST00000462258 TSPAN13O95857 204 aa5.97□□□□□ -1.45
SF3A3-204ENST00000462258 LGALS3P17931 250 aaKnown RBP5.97□□□□□ -1.45
SF3A3-204ENST00000462258 NMUP48645 174 aa5.97□□□□□ -1.45
SF3A3-204ENST00000462258 DAND5Q8N907 189 aa5.97□□□□□ -1.45
SF3A3-204ENST00000462258 TRBV10-3A0A0K0K1G6 114 aa5.95□□□□□ -1.46
SF3A3-204ENST00000462258 HIST1H2BKO60814 126 aa5.95□□□□□ -1.46
SF3A3-204ENST00000462258 HIST1H2BJP06899 126 aa5.95□□□□□ -1.46
SF3A3-204ENST00000462258 HIST1H2BOP23527 126 aa5.95□□□□□ -1.46
SF3A3-204ENST00000462258 HIST1H2BBP33778 126 aa5.95□□□□□ -1.46
SF3A3-204ENST00000462258 HIST1H2BDP58876 126 aa5.95□□□□□ -1.46
SF3A3-204ENST00000462258 HIST1H2BCP62807 126 aa5.95□□□□□ -1.46
SF3A3-204ENST00000462258 HIST2H2BEQ16778 126 aa5.95□□□□□ -1.46
SF3A3-204ENST00000462258 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.95□□□□□ -1.46
SF3A3-204ENST00000462258 LINC00304Q8N9R0 145 aa5.95□□□□□ -1.46
SF3A3-204ENST00000462258 HIST1H2BHQ93079 126 aa5.95□□□□□ -1.46
SF3A3-204ENST00000462258 HIST1H2BNQ99877 126 aa5.95□□□□□ -1.46
SF3A3-204ENST00000462258 HIST1H2BMQ99879 126 aa5.95□□□□□ -1.46
SF3A3-204ENST00000462258 MIEN1Q9BRT3 115 aa5.95□□□□□ -1.46
SF3A3-204ENST00000462258 SPRR1AP35321 89 aa5.94□□□□□ -1.46
SF3A3-204ENST00000462258 S100A12P80511 92 aa5.94□□□□□ -1.46
SF3A3-204ENST00000462258 LINC00337Q8N6G1 96 aa5.94□□□□□ -1.46
SF3A3-204ENST00000462258 KCNQ1DNQ9H478 68 aa5.94□□□□□ -1.46
SF3A3-204ENST00000462258 ZNF706Q9Y5V0 76 aaPredicted RBP5.94□□□□□ -1.46
SF3A3-204ENST00000462258 LOC107984156A0A0G2JMH3 177 aa5.93□□□□□ -1.46
SF3A3-204ENST00000462258 ETDCA0A1B0GVM5 59 aa5.93□□□□□ -1.46
SF3A3-204ENST00000462258 E9PLD3 99 aa5.93□□□□□ -1.46
SF3A3-204ENST00000462258 SYS1-DBNDD2H3BUS1 97 aa5.93□□□□□ -1.46
SF3A3-204ENST00000462258 ARL17AQ8IVW1 177 aa5.93□□□□□ -1.46
SF3A3-204ENST00000462258 SPRR4Q96PI1 79 aa5.93□□□□□ -1.46
SF3A3-204ENST00000462258 SPANXB1Q9NS25 103 aaPredicted RBP5.93□□□□□ -1.46
SF3A3-204ENST00000462258 TRBV10-2A0A0K0K1G8 114 aa5.92□□□□□ -1.46
SF3A3-204ENST00000462258 KRTAP4-16G5E9R7 235 aaPredicted RBP5.92□□□□□ -1.46
SF3A3-204ENST00000462258 DDTP30046 118 aa5.92□□□□□ -1.46
SF3A3-204ENST00000462258 C3orf22Q8N5N4 141 aa5.92□□□□□ -1.46
SF3A3-204ENST00000462258 A0A0J9YXY3 114 aa5.91□□□□□ -1.46
SF3A3-204ENST00000462258 NDUFC2O95298 119 aa5.9□□□□□ -1.46
SF3A3-204ENST00000462258 NPC2P61916 151 aa5.9□□□□□ -1.46
SF3A3-204ENST00000462258 LINC01545Q5VT33 79 aa5.9□□□□□ -1.46
SF3A3-204ENST00000462258 SMCR5Q8TEV8 140 aa5.9□□□□□ -1.46
SF3A3-204ENST00000462258 RETNLBQ9BQ08 111 aa5.9□□□□□ -1.46
SF3A3-204ENST00000462258 S100A7L2Q5SY68 101 aa5.89□□□□□ -1.47
SF3A3-204ENST00000462258 PET117Q6UWS5 81 aa5.89□□□□□ -1.47
SF3A3-204ENST00000462258 SOSTDC1Q6X4U4 206 aa5.89□□□□□ -1.47
SF3A3-204ENST00000462258 TRAV23DV6A0A075B6W5 121 aa5.88□□□□□ -1.47
SF3A3-204ENST00000462258 B5MCH6 92 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms