RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 RPL37AP8A6NKH3 93 aa5.42□□□□□ -1.54
BRCA1-207ENST00000461798 NDUFA6P56556 154 aa5.42□□□□□ -1.54
BRCA1-207ENST00000461798 GAGE10A6NGK3 116 aa5.41□□□□□ -1.54
BRCA1-207ENST00000461798 C11orf86A6NJI1 115 aa5.41□□□□□ -1.54
BRCA1-207ENST00000461798 SNAPINO95295 136 aa5.41□□□□□ -1.54
BRCA1-207ENST00000461798 APOC3P02656 99 aa5.41□□□□□ -1.54
BRCA1-207ENST00000461798 SFTA2Q6UW10 78 aa5.41□□□□□ -1.54
BRCA1-207ENST00000461798 BAGE3Q86Y29 109 aa5.41□□□□□ -1.54
BRCA1-207ENST00000461798 SVBPQ8N300 66 aa5.41□□□□□ -1.54
BRCA1-207ENST00000461798 NKAPP1Q8N9T2 125 aa5.41□□□□□ -1.54
BRCA1-207ENST00000461798 SND1-IT1Q9HBX3 110 aa5.41□□□□□ -1.54
BRCA1-207ENST00000461798 ERG28Q9UKR5 140 aa5.41□□□□□ -1.54
BRCA1-207ENST00000461798 A0A087X002 238 aa5.4□□□□□ -1.54
BRCA1-207ENST00000461798 CRYGAP11844 174 aa5.4□□□□□ -1.54
BRCA1-207ENST00000461798 VPREB1P12018 145 aa5.4□□□□□ -1.54
BRCA1-207ENST00000461798 PFN2P35080 140 aa5.4□□□□□ -1.54
BRCA1-207ENST00000461798 RPL24P83731 157 aaKnown RBP5.4□□□□□ -1.54
BRCA1-207ENST00000461798 PMCHL1Q16048 86 aa5.4□□□□□ -1.54
BRCA1-207ENST00000461798 YPEL4Q96NS1 127 aa5.4□□□□□ -1.54
BRCA1-207ENST00000461798 LPAP08519 4548 aa5.39□□□□□ -1.55
BRCA1-207ENST00000461798 TRAV12-1A0A0B4J245 112 aa5.39□□□□□ -1.55
BRCA1-207ENST00000461798 NDUFA5Q16718 116 aa5.39□□□□□ -1.55
BRCA1-207ENST00000461798 FAM229BQ4G0N7 80 aa5.39□□□□□ -1.55
BRCA1-207ENST00000461798 CHCHD1Q96BP2 118 aaKnown RBP5.39□□□□□ -1.55
BRCA1-207ENST00000461798 ZNF625Q96I27 306 aaPredicted RBP5.39□□□□□ -1.55
BRCA1-207ENST00000461798 SCO1O75880 301 aa5.38□□□□□ -1.55
BRCA1-207ENST00000461798 UBE2AP49459 152 aa5.38□□□□□ -1.55
BRCA1-207ENST00000461798 TMEM170BQ5T4T1 132 aa5.38□□□□□ -1.55
BRCA1-207ENST00000461798 TYMSOSQ8TAI1 123 aa5.38□□□□□ -1.55
BRCA1-207ENST00000461798 CHTOPQ9Y3Y2 248 aaKnown RBP5.38□□□□□ -1.55
BRCA1-207ENST00000461798 IGKV2-28A0A075B6P5 120 aa5.37□□□□□ -1.55
BRCA1-207ENST00000461798 TMEM223A0PJW6 202 aa5.37□□□□□ -1.55
BRCA1-207ENST00000461798 IGKV2D-28P01615 120 aa5.37□□□□□ -1.55
BRCA1-207ENST00000461798 LINC00310P59036 64 aa5.37□□□□□ -1.55
BRCA1-207ENST00000461798 PRR4Q16378 134 aa5.37□□□□□ -1.55
BRCA1-207ENST00000461798 Q8NDZ9 215 aa5.37□□□□□ -1.55
BRCA1-207ENST00000461798 TMEM126AQ9H061 195 aa5.37□□□□□ -1.55
BRCA1-207ENST00000461798 M0R378 163 aa5.36□□□□□ -1.55
BRCA1-207ENST00000461798 CTAG1AP78358 180 aa5.36□□□□□ -1.55
BRCA1-207ENST00000461798 KRTAP13-2Q52LG2 175 aa5.36□□□□□ -1.55
BRCA1-207ENST00000461798 IFI27L1Q96BM0 104 aa5.36□□□□□ -1.55
BRCA1-207ENST00000461798 ANAPC11Q9NYG5 84 aa5.36□□□□□ -1.55
BRCA1-207ENST00000461798 TMEM238C9JI98 176 aa5.35□□□□□ -1.55
BRCA1-207ENST00000461798 TSPAN13O95857 204 aa5.35□□□□□ -1.55
BRCA1-207ENST00000461798 LINC00158P58513 81 aa5.34□□□□□ -1.55
BRCA1-207ENST00000461798 PRLHP81277 87 aa5.34□□□□□ -1.55
BRCA1-207ENST00000461798 FAM19A1Q7Z5A9 133 aa5.34□□□□□ -1.55
BRCA1-207ENST00000461798 PLEKHB2Q96CS7 222 aa5.34□□□□□ -1.55
BRCA1-207ENST00000461798 HERV-K104P63124 156 aa5.33□□□□□ -1.56
BRCA1-207ENST00000461798 IGKV2D-26A0A0A0MRZ7 120 aa5.32□□□□□ -1.56
BRCA1-207ENST00000461798 LINC00587B1AMM8 73 aa5.32□□□□□ -1.56
BRCA1-207ENST00000461798 HSBP1O75506 76 aa5.32□□□□□ -1.56
BRCA1-207ENST00000461798 SMIM13P0DJ93 91 aa5.32□□□□□ -1.56
BRCA1-207ENST00000461798 CBLN2Q8IUK8 224 aa5.32□□□□□ -1.56
BRCA1-207ENST00000461798 FAM19A2Q8N3H0 131 aa5.32□□□□□ -1.56
BRCA1-207ENST00000461798 LINC00304Q8N9R0 145 aa5.32□□□□□ -1.56
BRCA1-207ENST00000461798 A0A0U1RRA0 63 aa5.31□□□□□ -1.56
BRCA1-207ENST00000461798 SPRR1AP35321 89 aa5.31□□□□□ -1.56
BRCA1-207ENST00000461798 LOC107984156A0A0G2JMH3 177 aa5.3□□□□□ -1.56
BRCA1-207ENST00000461798 PRYO14603 147 aa5.3□□□□□ -1.56
BRCA1-207ENST00000461798 ATP6V1G1O75348 118 aa5.3□□□□□ -1.56
BRCA1-207ENST00000461798 TRGC2P03986 189 aa5.3□□□□□ -1.56
BRCA1-207ENST00000461798 ARL17AQ8IVW1 177 aa5.3□□□□□ -1.56
BRCA1-207ENST00000461798 BOD1L2Q8IYS8 172 aa5.3□□□□□ -1.56
BRCA1-207ENST00000461798 MIR7-3HGQ8N6C7 128 aa5.3□□□□□ -1.56
BRCA1-207ENST00000461798 LINC00337Q8N6G1 96 aa5.3□□□□□ -1.56
BRCA1-207ENST00000461798 KCNQ1DNQ9H478 68 aa5.3□□□□□ -1.56
BRCA1-207ENST00000461798 NDUFA12Q9UI09 145 aa5.3□□□□□ -1.56
BRCA1-207ENST00000461798 MYMXA0A1B0GTQ4 84 aa5.29□□□□□ -1.56
BRCA1-207ENST00000461798 KRTAP4-16G5E9R7 235 aaPredicted RBP5.29□□□□□ -1.56
BRCA1-207ENST00000461798 LEPROTL1O95214 131 aa5.29□□□□□ -1.56
BRCA1-207ENST00000461798 MEIG1Q5JSS6 88 aa5.29□□□□□ -1.56
BRCA1-207ENST00000461798 SPRR4Q96PI1 79 aa5.29□□□□□ -1.56
BRCA1-207ENST00000461798 HIGD2AQ9BW72 106 aa5.29□□□□□ -1.56
BRCA1-207ENST00000461798 MAP1LC3CQ9BXW4 147 aa5.29□□□□□ -1.56
BRCA1-207ENST00000461798 LEPROTO15243 131 aa5.28□□□□□ -1.56
BRCA1-207ENST00000461798 SERF1AO75920 110 aa5.28□□□□□ -1.56
BRCA1-207ENST00000461798 SPAG11AQ6PDA7 123 aa5.28□□□□□ -1.56
BRCA1-207ENST00000461798 EIF4EBP3O60516 100 aaPredicted RBP5.27□□□□□ -1.57
BRCA1-207ENST00000461798 PLNP26678 52 aa5.27□□□□□ -1.57
BRCA1-207ENST00000461798 C3orf22Q8N5N4 141 aa5.27□□□□□ -1.57
BRCA1-207ENST00000461798 ZNF706Q9Y5V0 76 aaPredicted RBP5.27□□□□□ -1.57
BRCA1-207ENST00000461798 TRBV10-3A0A0K0K1G6 114 aa5.26□□□□□ -1.57
BRCA1-207ENST00000461798 TRBV10-2A0A0K0K1G8 114 aa5.26□□□□□ -1.57
BRCA1-207ENST00000461798 COLCA2A8K830 154 aa5.26□□□□□ -1.57
BRCA1-207ENST00000461798 TSPEAR-AS2P59090 65 aa5.26□□□□□ -1.57
BRCA1-207ENST00000461798 TPRXLQ17RH7 258 aa5.26□□□□□ -1.57
BRCA1-207ENST00000461798 SMCR5Q8TEV8 140 aa5.26□□□□□ -1.57
BRCA1-207ENST00000461798 RETNLBQ9BQ08 111 aa5.26□□□□□ -1.57
BRCA1-207ENST00000461798 HSPB8Q9UJY1 196 aa5.26□□□□□ -1.57
BRCA1-207ENST00000461798 MUC2Q02817 5179 aa5.25□□□□□ -1.57
BRCA1-207ENST00000461798 IGLV7-46A0A075B6I9 117 aa5.25□□□□□ -1.57
BRCA1-207ENST00000461798 J3QQQ9 107 aa5.25□□□□□ -1.57
BRCA1-207ENST00000461798 NCR3O14931 201 aa5.25□□□□□ -1.57
BRCA1-207ENST00000461798 DPM2O94777 84 aa5.25□□□□□ -1.57
BRCA1-207ENST00000461798 NMUP48645 174 aa5.25□□□□□ -1.57
BRCA1-207ENST00000461798 LINC00483Q53H64 154 aa5.25□□□□□ -1.57
BRCA1-207ENST00000461798 ETDCA0A1B0GVM5 59 aa5.24□□□□□ -1.57
BRCA1-207ENST00000461798 B5MCH6 92 aa5.24□□□□□ -1.57
BRCA1-207ENST00000461798 H0Y8G0 127 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms