RNA–Protein interactions for RNA: ENST00000460758.1

SHISA5-211, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,297 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-211ENST00000460758 SFTA2Q6UW10 78 aa8.14□□□□□ -1.11
SHISA5-211ENST00000460758 PKHD1L1Q86WI1 4243 aa8.14□□□□□ -1.11
SHISA5-211ENST00000460758 RPL37AP61513 92 aaKnown RBP8.13□□□□□ -1.11
SHISA5-211ENST00000460758 SCGB1D4Q6XE38 83 aa8.13□□□□□ -1.11
SHISA5-211ENST00000460758 SPACA4Q8TDM5 124 aa8.13□□□□□ -1.11
SHISA5-211ENST00000460758 LOC107984640A0A0U1RRK4 108 aa8.12□□□□□ -1.11
SHISA5-211ENST00000460758 C9orf116Q5BN46 136 aaPredicted RBP8.12□□□□□ -1.11
SHISA5-211ENST00000460758 ZNF625Q96I27 306 aaPredicted RBP8.12□□□□□ -1.11
SHISA5-211ENST00000460758 TTTY13Q9BZ97 58 aa8.12□□□□□ -1.11
SHISA5-211ENST00000460758 NDUFA12Q9UI09 145 aa8.12□□□□□ -1.11
SHISA5-211ENST00000460758 PKIGQ9Y2B9 76 aa8.12□□□□□ -1.11
SHISA5-211ENST00000460758 LRP1Q07954 4544 aaKnown RBP8.11□□□□□ -1.11
SHISA5-211ENST00000460758 A0A087WYN8 130 aa8.11□□□□□ -1.11
SHISA5-211ENST00000460758 KRTAP29-1A8MX34 341 aaPredicted RBP8.11□□□□□ -1.11
SHISA5-211ENST00000460758 J3QL48 77 aa8.1□□□□□ -1.11
SHISA5-211ENST00000460758 TLX1NBP0CAT3 122 aa8.1□□□□□ -1.11
SHISA5-211ENST00000460758 HERV-K104P63124 156 aa8.1□□□□□ -1.11
SHISA5-211ENST00000460758 RPL18AQ02543 176 aaKnown RBP8.1□□□□□ -1.11
SHISA5-211ENST00000460758 SPANXB1Q9NS25 103 aaPredicted RBP8.1□□□□□ -1.11
SHISA5-211ENST00000460758 TP73-AS1Q9UF72 201 aa8.1□□□□□ -1.11
SHISA5-211ENST00000460758 FAT3Q8TDW7 4589 aa8.09□□□□□ -1.11
SHISA5-211ENST00000460758 A0A096LNI7 61 aa8.09□□□□□ -1.11
SHISA5-211ENST00000460758 TMEM238C9JI98 176 aa8.09□□□□□ -1.11
SHISA5-211ENST00000460758 TIMM17BO60830 172 aa8.09□□□□□ -1.11
SHISA5-211ENST00000460758 Q6ZVH6 145 aa8.09□□□□□ -1.11
SHISA5-211ENST00000460758 SNHG12Q9BXW3 62 aa8.09□□□□□ -1.11
SHISA5-211ENST00000460758 IGKV2-24A0A0C4DH68 120 aa8.08□□□□□ -1.12
SHISA5-211ENST00000460758 NDUFC2-KCTD14E9PQ53 114 aa8.08□□□□□ -1.12
SHISA5-211ENST00000460758 PTTG1IPP53801 180 aa8.08□□□□□ -1.12
SHISA5-211ENST00000460758 GAGE2BQ13066 116 aa8.08□□□□□ -1.12
SHISA5-211ENST00000460758 BVES-AS1Q5T3Y7 98 aa8.08□□□□□ -1.12
SHISA5-211ENST00000460758 Q6ZRP5 223 aa8.08□□□□□ -1.12
SHISA5-211ENST00000460758 PLAC8Q9NZF1 115 aa8.08□□□□□ -1.12
SHISA5-211ENST00000460758 ERG28Q9UKR5 140 aa8.08□□□□□ -1.12
SHISA5-211ENST00000460758 A0A0J9YXY3 114 aa8.07□□□□□ -1.12
SHISA5-211ENST00000460758 HIST1H4GQ99525 98 aa8.07□□□□□ -1.12
SHISA5-211ENST00000460758 OXTP01178 125 aa8.06□□□□□ -1.12
SHISA5-211ENST00000460758 PFN2P35080 140 aa8.06□□□□□ -1.12
SHISA5-211ENST00000460758 HINT1P49773 126 aaPredicted RBP8.06□□□□□ -1.12
SHISA5-211ENST00000460758 GAGE2EQ4V326 116 aa8.06□□□□□ -1.12
SHISA5-211ENST00000460758 COL5A1-AS1Q5SY13 56 aa8.06□□□□□ -1.12
SHISA5-211ENST00000460758 CEND1Q8N111 149 aa8.06□□□□□ -1.12
SHISA5-211ENST00000460758 DPH3Q96FX2 82 aa8.06□□□□□ -1.12
SHISA5-211ENST00000460758 LINC00474Q9P2X8 69 aa8.06□□□□□ -1.12
SHISA5-211ENST00000460758 GAGE2DQ9UEU5 116 aa8.06□□□□□ -1.12
SHISA5-211ENST00000460758 TMEM238LA0A1B0GVL6 79 aa8.05□□□□□ -1.12
SHISA5-211ENST00000460758 A6NDN8 102 aa8.05□□□□□ -1.12
SHISA5-211ENST00000460758 A6NJY4 79 aa8.05□□□□□ -1.12
SHISA5-211ENST00000460758 SRSF9Q13242 221 aaKnown RBP eCLIP8.05□□□□□ -1.12
SHISA5-211ENST00000460758 COX17Q14061 63 aa8.05□□□□□ -1.12
SHISA5-211ENST00000460758 MEIG1Q5JSS6 88 aa8.05□□□□□ -1.12
SHISA5-211ENST00000460758 COPS9Q8WXC6 57 aa8.05□□□□□ -1.12
SHISA5-211ENST00000460758 SPANXDQ9BXN6 97 aa8.05□□□□□ -1.12
SHISA5-211ENST00000460758 PPDPFQ9H3Y8 114 aa8.05□□□□□ -1.12
SHISA5-211ENST00000460758 SPANXCQ9NY87 97 aa8.05□□□□□ -1.12
SHISA5-211ENST00000460758 SMIM13P0DJ93 91 aa8.04□□□□□ -1.12
SHISA5-211ENST00000460758 BATFQ16520 125 aa8.04□□□□□ -1.12
SHISA5-211ENST00000460758 A0A0U1RRA0 63 aa8.03□□□□□ -1.12
SHISA5-211ENST00000460758 IFITM1P13164 125 aa8.03□□□□□ -1.12
SHISA5-211ENST00000460758 LINC00158P58513 81 aa8.03□□□□□ -1.12
SHISA5-211ENST00000460758 LITAFQ99732 161 aa8.03□□□□□ -1.12
SHISA5-211ENST00000460758 C9orf129Q5T035 196 aaKnown RBP8.02□□□□□ -1.13
SHISA5-211ENST00000460758 XAGE1AQ9HD64 81 aa8.02□□□□□ -1.13
SHISA5-211ENST00000460758 RPL24P83731 157 aaKnown RBP8.01□□□□□ -1.13
SHISA5-211ENST00000460758 C7orf33Q8WU49 177 aa8.01□□□□□ -1.13
SHISA5-211ENST00000460758 MIR7-3HGQ8N6C7 128 aa8□□□□□ -1.13
SHISA5-211ENST00000460758 SND1-IT1Q9HBX3 110 aa8□□□□□ -1.13
SHISA5-211ENST00000460758 A0A1B0GWB2 263 aa7.99□□□□□ -1.13
SHISA5-211ENST00000460758 A0A1W2PNN7 141 aa7.99□□□□□ -1.13
SHISA5-211ENST00000460758 FAM168BA1KXE4 195 aa7.99□□□□□ -1.13
SHISA5-211ENST00000460758 FXYD2P54710 66 aa7.99□□□□□ -1.13
SHISA5-211ENST00000460758 PRR3P79522 188 aaKnown RBP7.99□□□□□ -1.13
SHISA5-211ENST00000460758 FAM19A5Q7Z5A7 132 aaPredicted RBP7.98□□□□□ -1.13
SHISA5-211ENST00000460758 DAND5Q8N907 189 aa7.98□□□□□ -1.13
SHISA5-211ENST00000460758 ADAMTSL4-AS1Q5T5F5 129 aa7.97□□□□□ -1.13
SHISA5-211ENST00000460758 SERTAD4-AS1Q5TG53 156 aa7.97□□□□□ -1.13
SHISA5-211ENST00000460758 KRTAP7-1Q8IUC3 87 aa7.97□□□□□ -1.13
SHISA5-211ENST00000460758 MT1HL1P0DM35 61 aa7.96□□□□□ -1.14
SHISA5-211ENST00000460758 MUSTN1Q8IVN3 82 aa7.96□□□□□ -1.14
SHISA5-211ENST00000460758 PLA2G2DQ9UNK4 145 aa7.96□□□□□ -1.14
SHISA5-211ENST00000460758 HMCN2Q8NDA2 5059 aa7.95□□□□□ -1.14
SHISA5-211ENST00000460758 NHP2Q9NX24 153 aaKnown RBP7.95□□□□□ -1.14
SHISA5-211ENST00000460758 A0A0B4J2C4 111 aa7.94□□□□□ -1.14
SHISA5-211ENST00000460758 LOC107984156A0A0G2JMH3 177 aa7.94□□□□□ -1.14
SHISA5-211ENST00000460758 M0QXV9 152 aa7.94□□□□□ -1.14
SHISA5-211ENST00000460758 ARL17AQ8IVW1 177 aa7.94□□□□□ -1.14
SHISA5-211ENST00000460758 LINC00308Q8TCZ7 52 aa7.94□□□□□ -1.14
SHISA5-211ENST00000460758 IGLV5-37A0A075B6J1 123 aa7.93□□□□□ -1.14
SHISA5-211ENST00000460758 A4D1N5 150 aa7.93□□□□□ -1.14
SHISA5-211ENST00000460758 TAX1BP3O14907 124 aa7.93□□□□□ -1.14
SHISA5-211ENST00000460758 VPREB1P12018 145 aa7.93□□□□□ -1.14
SHISA5-211ENST00000460758 NPC2P61916 151 aa7.93□□□□□ -1.14
SHISA5-211ENST00000460758 SOSTDC1Q6X4U4 206 aa7.93□□□□□ -1.14
SHISA5-211ENST00000460758 PHF5AQ7RTV0 110 aaKnown RBP7.93□□□□□ -1.14
SHISA5-211ENST00000460758 Q8NDZ9 215 aa7.93□□□□□ -1.14
SHISA5-211ENST00000460758 EIF4EBP3O60516 100 aaPredicted RBP7.92□□□□□ -1.14
SHISA5-211ENST00000460758 NKAPP1Q8N9T2 125 aa7.92□□□□□ -1.14
SHISA5-211ENST00000460758 C22orf24Q9Y442 160 aa7.92□□□□□ -1.14
SHISA5-211ENST00000460758 C9orf118A6NHY6 69 aa7.91□□□□□ -1.14
SHISA5-211ENST00000460758 CFC1BP0CG36 223 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms