RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 MYMXA0A1B0GTQ4 84 aa12.7□□□□□ -0.38
VARS-218ENST00000459667 LINC00587B1AMM8 73 aa12.7□□□□□ -0.38
VARS-218ENST00000459667 LINC00158P58513 81 aa12.7□□□□□ -0.38
VARS-218ENST00000459667 TP73-AS1Q9UF72 201 aa12.7□□□□□ -0.38
VARS-218ENST00000459667 PLA2G2DQ9UNK4 145 aa12.7□□□□□ -0.38
VARS-218ENST00000459667 MEIG1Q5JSS6 88 aa12.69□□□□□ -0.38
VARS-218ENST00000459667 LINC01545Q5VT33 79 aa12.68□□□□□ -0.38
VARS-218ENST00000459667 MRPL55Q7Z7F7 128 aaKnown RBP12.68□□□□□ -0.38
VARS-218ENST00000459667 LINC01600Q96MT4 127 aa12.68□□□□□ -0.38
VARS-218ENST00000459667 J3QQQ9 107 aa12.67□□□□□ -0.38
VARS-218ENST00000459667 C3orf79P0CE67 100 aa12.67□□□□□ -0.38
VARS-218ENST00000459667 LGALS3P17931 250 aaKnown RBP12.67□□□□□ -0.38
VARS-218ENST00000459667 KRTDAPP60985 99 aa12.67□□□□□ -0.38
VARS-218ENST00000459667 NKAPP1Q8N9T2 125 aa12.67□□□□□ -0.38
VARS-218ENST00000459667 SND1-IT1Q9HBX3 110 aa12.67□□□□□ -0.38
VARS-218ENST00000459667 C20orf202A1L168 122 aa12.66□□□□□ -0.38
VARS-218ENST00000459667 NMUP48645 174 aa12.66□□□□□ -0.38
VARS-218ENST00000459667 S100A6P06703 90 aa12.65□□□□□ -0.38
VARS-218ENST00000459667 IGLV5-37A0A075B6J1 123 aa12.64□□□□□ -0.39
VARS-218ENST00000459667 TSPEAR-AS2P59090 65 aa12.64□□□□□ -0.39
VARS-218ENST00000459667 RPL24P83731 157 aaKnown RBP12.64□□□□□ -0.39
VARS-218ENST00000459667 A0A0U1RRA0 63 aa12.63□□□□□ -0.39
VARS-218ENST00000459667 E9PLD3 99 aa12.63□□□□□ -0.39
VARS-218ENST00000459667 SMIM13P0DJ93 91 aa12.63□□□□□ -0.39
VARS-218ENST00000459667 S100A2P29034 98 aa12.63□□□□□ -0.39
VARS-218ENST00000459667 DIRC1Q969H9 104 aa12.63□□□□□ -0.39
VARS-218ENST00000459667 LINC00167Q96N53 147 aa12.63□□□□□ -0.39
VARS-218ENST00000459667 GAGE10A6NGK3 116 aa12.61□□□□□ -0.39
VARS-218ENST00000459667 AKR1D1P51857 326 aa12.61□□□□□ -0.39
VARS-218ENST00000459667 RPL37AP8A6NKH3 93 aa12.6□□□□□ -0.39
VARS-218ENST00000459667 H0Y9J4 135 aa12.6□□□□□ -0.39
VARS-218ENST00000459667 VPREB1P12018 145 aa12.58□□□□□ -0.4
VARS-218ENST00000459667 HIST3H2BBQ8N257 126 aa12.58□□□□□ -0.4
VARS-218ENST00000459667 MIR7-3HGQ8N6C7 128 aa12.58□□□□□ -0.4
VARS-218ENST00000459667 TNXBP22105 4242 aa12.57□□□□□ -0.4
VARS-218ENST00000459667 ZNF861PO60384 105 aa12.55□□□□□ -0.4
VARS-218ENST00000459667 BCE1O60756 84 aa12.55□□□□□ -0.4
VARS-218ENST00000459667 KRTAP10-8P60410 259 aa12.55□□□□□ -0.4
VARS-218ENST00000459667 Q8NDZ9 215 aa12.54□□□□□ -0.4
VARS-218ENST00000459667 HIST1H2BLQ99880 126 aa12.54□□□□□ -0.4
VARS-218ENST00000459667 IGKV2-28A0A075B6P5 120 aa12.53□□□□□ -0.4
VARS-218ENST00000459667 IGKV2D-28P01615 120 aa12.53□□□□□ -0.4
VARS-218ENST00000459667 BOD1L2Q8IYS8 172 aa12.53□□□□□ -0.4
VARS-218ENST00000459667 MIEN1Q9BRT3 115 aa12.52□□□□□ -0.41
VARS-218ENST00000459667 A0A0J9YXY3 114 aa12.51□□□□□ -0.41
VARS-218ENST00000459667 RPL28P46779 137 aaKnown RBP12.51□□□□□ -0.41
VARS-218ENST00000459667 IGLV1-50A0A075B6I6 118 aa12.5□□□□□ -0.41
VARS-218ENST00000459667 M0R378 163 aa12.5□□□□□ -0.41
VARS-218ENST00000459667 SNRPEP62304 92 aaKnown RBP12.5□□□□□ -0.41
VARS-218ENST00000459667 HMCN2Q8NDA2 5059 aa12.5□□□□□ -0.41
VARS-218ENST00000459667 ZNF815PA8K554 130 aa12.49□□□□□ -0.41
VARS-218ENST00000459667 DAND5Q8N907 189 aa12.49□□□□□ -0.41
VARS-218ENST00000459667 IGKV2D-26A0A0A0MRZ7 120 aa12.48□□□□□ -0.41
VARS-218ENST00000459667 KRTAP1-4P0C5Y4 121 aa12.48□□□□□ -0.41
VARS-218ENST00000459667 ATOH7Q8N100 152 aa12.48□□□□□ -0.41
VARS-218ENST00000459667 PRR26Q8N8Z3 221 aa12.47□□□□□ -0.41
VARS-218ENST00000459667 LOC107984156A0A0G2JMH3 177 aa12.46□□□□□ -0.41
VARS-218ENST00000459667 UBE2AP49459 152 aa12.46□□□□□ -0.41
VARS-218ENST00000459667 ARL17AQ8IVW1 177 aa12.46□□□□□ -0.41
VARS-218ENST00000459667 TMEM238C9JI98 176 aa12.45□□□□□ -0.42
VARS-218ENST00000459667 NCR3O14931 201 aa12.45□□□□□ -0.42
VARS-218ENST00000459667 TIMM17BO60830 172 aa12.45□□□□□ -0.42
VARS-218ENST00000459667 TMEM126AQ9H061 195 aa12.45□□□□□ -0.42
VARS-218ENST00000459667 C5orf52A6NGY3 159 aa12.44□□□□□ -0.42
VARS-218ENST00000459667 KRTAP13-1Q8IUC0 172 aa12.44□□□□□ -0.42
VARS-218ENST00000459667 HSBP1L1C9JCN9 74 aa12.43□□□□□ -0.42
VARS-218ENST00000459667 S100A12P80511 92 aa12.43□□□□□ -0.42
VARS-218ENST00000459667 ANKRD39Q53RE8 183 aa12.43□□□□□ -0.42
VARS-218ENST00000459667 SCGB1D4Q6XE38 83 aa12.42□□□□□ -0.42
VARS-218ENST00000459667 FAM19A1Q7Z5A9 133 aa12.42□□□□□ -0.42
VARS-218ENST00000459667 TTTY13Q9BZ97 58 aa12.42□□□□□ -0.42
VARS-218ENST00000459667 TRBV10-2A0A0K0K1G8 114 aa12.41□□□□□ -0.42
VARS-218ENST00000459667 NDUFC2O95298 119 aa12.41□□□□□ -0.42
VARS-218ENST00000459667 PRLHP81277 87 aa12.41□□□□□ -0.42
VARS-218ENST00000459667 ADAMTSL4-AS1Q5T5F5 129 aa12.41□□□□□ -0.42
VARS-218ENST00000459667 SPANXB1Q9NS25 103 aaPredicted RBP12.41□□□□□ -0.42
VARS-218ENST00000459667 PRYO14603 147 aa12.39□□□□□ -0.43
VARS-218ENST00000459667 NPC2P61916 151 aa12.39□□□□□ -0.43
VARS-218ENST00000459667 SCGB1D1O95968 90 aa12.38□□□□□ -0.43
VARS-218ENST00000459667 RPL13AP40429 203 aaKnown RBP12.38□□□□□ -0.43
VARS-218ENST00000459667 LITAFQ99732 161 aa12.38□□□□□ -0.43
VARS-218ENST00000459667 TRBV10-3A0A0K0K1G6 114 aa12.36□□□□□ -0.43
VARS-218ENST00000459667 S100A7L2Q5SY68 101 aa12.36□□□□□ -0.43
VARS-218ENST00000459667 SOSTDC1Q6X4U4 206 aa12.36□□□□□ -0.43
VARS-218ENST00000459667 LINC00308Q8TCZ7 52 aa12.36□□□□□ -0.43
VARS-218ENST00000459667 COPS9Q8WXC6 57 aa12.36□□□□□ -0.43
VARS-218ENST00000459667 DDTP30046 118 aa12.35□□□□□ -0.43
VARS-218ENST00000459667 PCP2Q8IVA1 136 aa12.35□□□□□ -0.43
VARS-218ENST00000459667 KCNQ1DNQ9H478 68 aa12.35□□□□□ -0.43
VARS-218ENST00000459667 SPANXCQ9NY87 97 aa12.34□□□□□ -0.43
VARS-218ENST00000459667 SPANXDQ9BXN6 97 aa12.33□□□□□ -0.44
VARS-218ENST00000459667 ETDCA0A1B0GVM5 59 aa12.31□□□□□ -0.44
VARS-218ENST00000459667 EIF4EBP3O60516 100 aaPredicted RBP12.31□□□□□ -0.44
VARS-218ENST00000459667 Q6ZVH6 145 aa12.31□□□□□ -0.44
VARS-218ENST00000459667 LINC00337Q8N6G1 96 aa12.31□□□□□ -0.44
VARS-218ENST00000459667 CBY1Q9Y3M2 126 aa12.31□□□□□ -0.44
VARS-218ENST00000459667 A0A087X002 238 aa12.3□□□□□ -0.44
VARS-218ENST00000459667 CRYGAP11844 174 aa12.3□□□□□ -0.44
VARS-218ENST00000459667 HIGD2AQ9BW72 106 aa12.3□□□□□ -0.44
VARS-218ENST00000459667 ANAPC11Q9NYG5 84 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms