RNA–Protein interactions for RNA: ENST00000459249.1

RNU6ATAC28P-201, Transcript of RNA, U6atac small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6ATAC28P, Length 118 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC28P-201ENST00000459249 LINC00614P0C842 121 aa2.93□□□□□ -1.94
RNU6ATAC28P-201ENST00000459249 HERVK_113P63121 156 aa2.93□□□□□ -1.94
RNU6ATAC28P-201ENST00000459249 SPAG11BQ08648 103 aa2.93□□□□□ -1.94
RNU6ATAC28P-201ENST00000459249 SYCNQ0VAF6 134 aa2.93□□□□□ -1.94
RNU6ATAC28P-201ENST00000459249 C5orf38Q86SI9 138 aa2.93□□□□□ -1.94
RNU6ATAC28P-201ENST00000459249 SPACA4Q8TDM5 124 aa2.93□□□□□ -1.94
RNU6ATAC28P-201ENST00000459249 SCGB3A1Q96QR1 104 aa2.93□□□□□ -1.94
RNU6ATAC28P-201ENST00000459249 MRPL35Q9NZE8 188 aaKnown RBP2.93□□□□□ -1.94
RNU6ATAC28P-201ENST00000459249 PLAC8Q9NZF1 115 aa2.93□□□□□ -1.94
RNU6ATAC28P-201ENST00000459249 LINC00474Q9P2X8 69 aa2.93□□□□□ -1.94
RNU6ATAC28P-201ENST00000459249 RYR1P21817 5038 aa2.93□□□□□ -1.94
RNU6ATAC28P-201ENST00000459249 PANO1I0J062 215 aa2.92□□□□□ -1.94
RNU6ATAC28P-201ENST00000459249 NDUFA1O15239 70 aa2.92□□□□□ -1.94
RNU6ATAC28P-201ENST00000459249 SMR3BP02814 79 aaPredicted RBP2.92□□□□□ -1.94
RNU6ATAC28P-201ENST00000459249 TLX1NBP0CAT3 122 aa2.92□□□□□ -1.94
RNU6ATAC28P-201ENST00000459249 HAMPP81172 84 aa2.92□□□□□ -1.94
RNU6ATAC28P-201ENST00000459249 COX6A2Q02221 97 aa2.92□□□□□ -1.94
RNU6ATAC28P-201ENST00000459249 PMVKQ15126 192 aa2.92□□□□□ -1.94
RNU6ATAC28P-201ENST00000459249 Q6ZRU5 148 aa2.92□□□□□ -1.94
RNU6ATAC28P-201ENST00000459249 ORAOV1Q8WV07 137 aa2.92□□□□□ -1.94
RNU6ATAC28P-201ENST00000459249 CHCHD1Q96BP2 118 aaKnown RBP2.92□□□□□ -1.94
RNU6ATAC28P-201ENST00000459249 LINC00526Q96FQ7 95 aa2.92□□□□□ -1.94
RNU6ATAC28P-201ENST00000459249 CAMK2N2Q96S95 79 aa2.92□□□□□ -1.94
RNU6ATAC28P-201ENST00000459249 CST9LQ9H4G1 147 aa2.92□□□□□ -1.94
RNU6ATAC28P-201ENST00000459249 FAT1Q14517 4588 aa2.91□□□□□ -1.94
RNU6ATAC28P-201ENST00000459249 IGLV1-50A0A075B6I6 118 aa2.91□□□□□ -1.94
RNU6ATAC28P-201ENST00000459249 A0A087WYN8 130 aa2.91□□□□□ -1.94
RNU6ATAC28P-201ENST00000459249 A0A096LNI7 61 aa2.91□□□□□ -1.94
RNU6ATAC28P-201ENST00000459249 TRBV30A0A0K0K1B3 111 aa2.91□□□□□ -1.94
RNU6ATAC28P-201ENST00000459249 LOC107984640A0A0U1RRK4 108 aa2.91□□□□□ -1.94
RNU6ATAC28P-201ENST00000459249 C8orf87E5RJ46 101 aa2.91□□□□□ -1.94
RNU6ATAC28P-201ENST00000459249 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.91□□□□□ -1.94
RNU6ATAC28P-201ENST00000459249 IGLC3P0DOY3 106 aa2.91□□□□□ -1.94
RNU6ATAC28P-201ENST00000459249 CXCL5P42830 114 aa2.91□□□□□ -1.94
RNU6ATAC28P-201ENST00000459249 KRTAP10-4P60372 401 aaPredicted RBP2.91□□□□□ -1.94
RNU6ATAC28P-201ENST00000459249 LCE5AQ5TCM9 118 aa2.91□□□□□ -1.94
RNU6ATAC28P-201ENST00000459249 Q8IZM0 81 aa2.91□□□□□ -1.94
RNU6ATAC28P-201ENST00000459249 LINC00337Q8N6G1 96 aa2.91□□□□□ -1.94
RNU6ATAC28P-201ENST00000459249 CDKN2A-AS1Q9UH64 79 aa2.91□□□□□ -1.94
RNU6ATAC28P-201ENST00000459249 IGKV2-24A0A0C4DH68 120 aa2.9□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 COLCA2A8K830 154 aa2.9□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 TRGC2P03986 189 aa2.9□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 INAFM2P0DMQ5 153 aa2.9□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 SCGB1D4Q6XE38 83 aa2.9□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 KRTAP9-9Q9BYP9 154 aa2.9□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 C6orf48Q9UBA6 75 aa2.9□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 TRAV12-1A0A0B4J245 112 aa2.89□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 H3BRM9 83 aa2.89□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 DDTP30046 118 aa2.89□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 NMUP48645 174 aa2.89□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 RPL37AP61513 92 aaKnown RBP2.89□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 C1orf195Q5TG92 126 aa2.89□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 UNQ6190/PRO20217Q6UXQ8 127 aa2.89□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 BAGE3Q86Y29 109 aa2.89□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 KRTAP19-1Q8IUB9 90 aa2.89□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 NDUFC2-KCTD14E9PQ53 114 aa2.88□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 F8VRH5 84 aa2.88□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 ZNF22P17026 224 aaPredicted RBP2.88□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 CKS1BP61024 79 aa2.88□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 PMCHL1Q16048 86 aa2.88□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 C2orf82Q6UX34 121 aa2.88□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 CEND1Q8N111 149 aa2.88□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 IFI27L1Q96BM0 104 aa2.88□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 DPH3Q96FX2 82 aa2.88□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 A0A1W2PNN7 141 aa2.87□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 C11orf86A6NJI1 115 aa2.87□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 NDUFA6P56556 154 aa2.87□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 C9orf116Q5BN46 136 aaPredicted RBP2.87□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 SFTA2Q6UW10 78 aa2.87□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 COX7B2Q8TF08 81 aa2.87□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 TOMM7Q9P0U1 55 aa2.87□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 HSPB8Q9UJY1 196 aa2.87□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 FLG2Q5D862 2391 aaPredicted RBP2.86□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 KRTAP29-1A8MX34 341 aaPredicted RBP2.86□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 HIST1H2BKO60814 126 aa2.86□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 SCO1O75880 301 aa2.86□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 LEPROTL1O95214 131 aa2.86□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 HIST1H2BJP06899 126 aa2.86□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 SPINK8P0C7L1 97 aa2.86□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 HIST1H2BOP23527 126 aa2.86□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 HIST1H2BBP33778 126 aa2.86□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 HIST1H2BDP58876 126 aa2.86□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 HIST1H2BCP62807 126 aa2.86□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 BATFQ16520 125 aa2.86□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 HIST2H2BEQ16778 126 aa2.86□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.86□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 C9orf129Q5T035 196 aaKnown RBP2.86□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 FAM19A2Q8N3H0 131 aa2.86□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 HIST1H2BHQ93079 126 aa2.86□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 HIST1H2BNQ99877 126 aa2.86□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 HIST1H2BMQ99879 126 aa2.86□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 RBM12B-AS1Q9P1G2 102 aa2.86□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 TP73-AS1Q9UF72 201 aa2.86□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 LOC105371267A0A1B0GV96 52 aa2.85□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 TMEM223A0PJW6 202 aa2.85□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 FAM168BA1KXE4 195 aa2.85□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 NUPR1O60356 82 aa2.85□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 S100A1P23297 94 aa2.85□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 PLNP26678 52 aa2.85□□□□□ -1.95
RNU6ATAC28P-201ENST00000459249 COX17Q14061 63 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 153 ms