RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 HIST1H2BHQ93079 126 aa11.03□□□□□ -0.64
PDLIM2-215ENST00000456545 HIST1H2BNQ99877 126 aa11.03□□□□□ -0.64
PDLIM2-215ENST00000456545 HIST1H2BMQ99879 126 aa11.03□□□□□ -0.64
PDLIM2-215ENST00000456545 HERVK_113P61574 105 aa11.02□□□□□ -0.65
PDLIM2-215ENST00000456545 MYMXA0A1B0GTQ4 84 aa11.01□□□□□ -0.65
PDLIM2-215ENST00000456545 H0Y9J4 135 aa11.01□□□□□ -0.65
PDLIM2-215ENST00000456545 HERV-K104P63124 156 aa11.01□□□□□ -0.65
PDLIM2-215ENST00000456545 PMCHL2Q9BQD1 86 aa11.01□□□□□ -0.65
PDLIM2-215ENST00000456545 IGLV5-37A0A075B6J1 123 aa11□□□□□ -0.65
PDLIM2-215ENST00000456545 LINC00587B1AMM8 73 aa11□□□□□ -0.65
PDLIM2-215ENST00000456545 IGKCP01834 107 aa11□□□□□ -0.65
PDLIM2-215ENST00000456545 NDUFA12Q9UI09 145 aa11□□□□□ -0.65
PDLIM2-215ENST00000456545 LEPROTO15243 131 aa10.99□□□□□ -0.65
PDLIM2-215ENST00000456545 PLEKHB2Q96CS7 222 aa10.99□□□□□ -0.65
PDLIM2-215ENST00000456545 ZNF861PO60384 105 aa10.98□□□□□ -0.65
PDLIM2-215ENST00000456545 SMIM13P0DJ93 91 aa10.98□□□□□ -0.65
PDLIM2-215ENST00000456545 BCE1O60756 84 aa10.97□□□□□ -0.65
PDLIM2-215ENST00000456545 IGKV2-28A0A075B6P5 120 aa10.96□□□□□ -0.65
PDLIM2-215ENST00000456545 IGKV2D-28P01615 120 aa10.96□□□□□ -0.65
PDLIM2-215ENST00000456545 VPREB1P12018 145 aa10.96□□□□□ -0.65
PDLIM2-215ENST00000456545 RPL28P46779 137 aaKnown RBP10.96□□□□□ -0.65
PDLIM2-215ENST00000456545 J3QQQ9 107 aa10.95□□□□□ -0.66
PDLIM2-215ENST00000456545 LGALS3P17931 250 aaKnown RBP10.95□□□□□ -0.66
PDLIM2-215ENST00000456545 KRTAP10-8P60410 259 aa10.95□□□□□ -0.66
PDLIM2-215ENST00000456545 UBE2AP49459 152 aa10.94□□□□□ -0.66
PDLIM2-215ENST00000456545 MIR7-3HGQ8N6C7 128 aa10.94□□□□□ -0.66
PDLIM2-215ENST00000456545 SYS1-DBNDD2H3BUS1 97 aa10.93□□□□□ -0.66
PDLIM2-215ENST00000456545 BOD1L2Q8IYS8 172 aa10.92□□□□□ -0.66
PDLIM2-215ENST00000456545 IGLV1-50A0A075B6I6 118 aa10.91□□□□□ -0.66
PDLIM2-215ENST00000456545 S100A1P23297 94 aa10.91□□□□□ -0.66
PDLIM2-215ENST00000456545 NMUP48645 174 aa10.91□□□□□ -0.66
PDLIM2-215ENST00000456545 TSPEAR-AS2P59090 65 aa10.91□□□□□ -0.66
PDLIM2-215ENST00000456545 PRR26Q8N8Z3 221 aa10.91□□□□□ -0.66
PDLIM2-215ENST00000456545 M0R378 163 aa10.9□□□□□ -0.66
PDLIM2-215ENST00000456545 PET117Q6UWS5 81 aa10.9□□□□□ -0.66
PDLIM2-215ENST00000456545 FAM19A1Q7Z5A9 133 aa10.89□□□□□ -0.67
PDLIM2-215ENST00000456545 Q8NDZ9 215 aa10.88□□□□□ -0.67
PDLIM2-215ENST00000456545 KRTDAPP60985 99 aa10.87□□□□□ -0.67
PDLIM2-215ENST00000456545 COA6Q5JTJ3 125 aaKnown RBP10.87□□□□□ -0.67
PDLIM2-215ENST00000456545 MIEN1Q9BRT3 115 aa10.87□□□□□ -0.67
PDLIM2-215ENST00000456545 TMEM126AQ9H061 195 aa10.87□□□□□ -0.67
PDLIM2-215ENST00000456545 TMEM238C9JI98 176 aa10.86□□□□□ -0.67
PDLIM2-215ENST00000456545 E9PLD3 99 aa10.86□□□□□ -0.67
PDLIM2-215ENST00000456545 NCR3O14931 201 aa10.86□□□□□ -0.67
PDLIM2-215ENST00000456545 LINC01545Q5VT33 79 aa10.86□□□□□ -0.67
PDLIM2-215ENST00000456545 KRTAP1-4P0C5Y4 121 aa10.85□□□□□ -0.67
PDLIM2-215ENST00000456545 C3orf79P0CE67 100 aa10.85□□□□□ -0.67
PDLIM2-215ENST00000456545 RPL13AP40429 203 aaKnown RBP10.85□□□□□ -0.67
PDLIM2-215ENST00000456545 DAND5Q8N907 189 aa10.85□□□□□ -0.67
PDLIM2-215ENST00000456545 S100A12P80511 92 aa10.84□□□□□ -0.67
PDLIM2-215ENST00000456545 IGKV2D-26A0A0A0MRZ7 120 aa10.83□□□□□ -0.68
PDLIM2-215ENST00000456545 C20orf202A1L168 122 aa10.83□□□□□ -0.68
PDLIM2-215ENST00000456545 PRLHP81277 87 aa10.83□□□□□ -0.68
PDLIM2-215ENST00000456545 A0A0J9YXY3 114 aa10.81□□□□□ -0.68
PDLIM2-215ENST00000456545 KRTAP13-1Q8IUC0 172 aa10.8□□□□□ -0.68
PDLIM2-215ENST00000456545 TNXBP22105 4242 aa10.79□□□□□ -0.68
PDLIM2-215ENST00000456545 PRYO14603 147 aa10.79□□□□□ -0.68
PDLIM2-215ENST00000456545 CRYGAP11844 174 aa10.79□□□□□ -0.68
PDLIM2-215ENST00000456545 LOC107984156A0A0G2JMH3 177 aa10.78□□□□□ -0.68
PDLIM2-215ENST00000456545 NPC2P61916 151 aa10.78□□□□□ -0.68
PDLIM2-215ENST00000456545 ARL17AQ8IVW1 177 aa10.78□□□□□ -0.68
PDLIM2-215ENST00000456545 HIGD2AQ9BW72 106 aa10.78□□□□□ -0.68
PDLIM2-215ENST00000456545 ZNF815PA8K554 130 aa10.77□□□□□ -0.69
PDLIM2-215ENST00000456545 S100A2P29034 98 aa10.77□□□□□ -0.69
PDLIM2-215ENST00000456545 S100A7L2Q5SY68 101 aa10.77□□□□□ -0.69
PDLIM2-215ENST00000456545 TRBV10-3A0A0K0K1G6 114 aa10.76□□□□□ -0.69
PDLIM2-215ENST00000456545 ETDCA0A1B0GVM5 59 aa10.76□□□□□ -0.69
PDLIM2-215ENST00000456545 AKR1D1P51857 326 aa10.76□□□□□ -0.69
PDLIM2-215ENST00000456545 TRBV10-2A0A0K0K1G8 114 aa10.75□□□□□ -0.69
PDLIM2-215ENST00000456545 S100A6P06703 90 aa10.75□□□□□ -0.69
PDLIM2-215ENST00000456545 DDTP30046 118 aa10.75□□□□□ -0.69
PDLIM2-215ENST00000456545 ADAMTSL4-AS1Q5T5F5 129 aa10.75□□□□□ -0.69
PDLIM2-215ENST00000456545 TYMSOSQ8TAI1 123 aa10.75□□□□□ -0.69
PDLIM2-215ENST00000456545 KCNQ1DNQ9H478 68 aa10.75□□□□□ -0.69
PDLIM2-215ENST00000456545 SPANXB1Q9NS25 103 aaPredicted RBP10.75□□□□□ -0.69
PDLIM2-215ENST00000456545 ANAPC11Q9NYG5 84 aa10.75□□□□□ -0.69
PDLIM2-215ENST00000456545 NDUFC2O95298 119 aa10.74□□□□□ -0.69
PDLIM2-215ENST00000456545 LINC00337Q8N6G1 96 aa10.73□□□□□ -0.69
PDLIM2-215ENST00000456545 HMCN2Q8NDA2 5059 aa10.72□□□□□ -0.69
PDLIM2-215ENST00000456545 TIMM17BO60830 172 aa10.72□□□□□ -0.69
PDLIM2-215ENST00000456545 ATOH7Q8N100 152 aa10.72□□□□□ -0.69
PDLIM2-215ENST00000456545 A0A087X002 238 aa10.71□□□□□ -0.69
PDLIM2-215ENST00000456545 FAM229BQ4G0N7 80 aa10.71□□□□□ -0.69
PDLIM2-215ENST00000456545 SCGB1D4Q6XE38 83 aa10.71□□□□□ -0.69
PDLIM2-215ENST00000456545 TTTY13Q9BZ97 58 aa10.71□□□□□ -0.69
PDLIM2-215ENST00000456545 SOSTDC1Q6X4U4 206 aa10.7□□□□□ -0.7
PDLIM2-215ENST00000456545 SPRR1AP35321 89 aa10.69□□□□□ -0.7
PDLIM2-215ENST00000456545 HIST3H2BBQ8N257 126 aa10.69□□□□□ -0.7
PDLIM2-215ENST00000456545 LINC00308Q8TCZ7 52 aa10.69□□□□□ -0.7
PDLIM2-215ENST00000456545 ZNF706Q9Y5V0 76 aaPredicted RBP10.69□□□□□ -0.7
PDLIM2-215ENST00000456545 OR13C6PQ8NH95 151 aa10.68□□□□□ -0.7
PDLIM2-215ENST00000456545 SMCR5Q8TEV8 140 aa10.68□□□□□ -0.7
PDLIM2-215ENST00000456545 CBY1Q9Y3M2 126 aa10.68□□□□□ -0.7
PDLIM2-215ENST00000456545 EIF4EBP3O60516 100 aaPredicted RBP10.67□□□□□ -0.7
PDLIM2-215ENST00000456545 TSPAN13O95857 204 aa10.67□□□□□ -0.7
PDLIM2-215ENST00000456545 ANKRD39Q53RE8 183 aa10.67□□□□□ -0.7
PDLIM2-215ENST00000456545 LITAFQ99732 161 aa10.67□□□□□ -0.7
PDLIM2-215ENST00000456545 HIST1H2BLQ99880 126 aa10.67□□□□□ -0.7
PDLIM2-215ENST00000456545 SNRPEP62304 92 aaKnown RBP10.66□□□□□ -0.7
PDLIM2-215ENST00000456545 SPANXCQ9NY87 97 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms