RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 H3BNG1 76 aa3.4□□□□□ -1.86
PCDH9-203ENST00000456367 OCR1Q9BZK8 76 aa3.4□□□□□ -1.86
PCDH9-203ENST00000456367 C16orf95Q9H693 158 aa3.4□□□□□ -1.86
PCDH9-203ENST00000456367 A8MWP4 228 aa3.4□□□□□ -1.87
PCDH9-203ENST00000456367 SPINK6Q6UWN8 80 aa3.4□□□□□ -1.87
PCDH9-203ENST00000456367 PRR26Q8N8Z3 221 aa3.4□□□□□ -1.87
PCDH9-203ENST00000456367 LINC00476Q8WZB0 136 aa3.4□□□□□ -1.87
PCDH9-203ENST00000456367 C22orf24Q9Y442 160 aa3.4□□□□□ -1.87
PCDH9-203ENST00000456367 UQCR11O14957 56 aa3.4□□□□□ -1.87
PCDH9-203ENST00000456367 AVPP01185 164 aa3.4□□□□□ -1.87
PCDH9-203ENST00000456367 FP248Q71RG6 208 aaPredicted RBP3.39□□□□□ -1.87
PCDH9-203ENST00000456367 IGLV9-49A0A0B4J1Y8 123 aa3.39□□□□□ -1.87
PCDH9-203ENST00000456367 DEFB116Q30KQ4 102 aa3.39□□□□□ -1.87
PCDH9-203ENST00000456367 KCNQ1DNQ9H478 68 aa3.39□□□□□ -1.87
PCDH9-203ENST00000456367 ZNF575Q86XF7 245 aa3.38□□□□□ -1.87
PCDH9-203ENST00000456367 K7EQZ3 153 aa3.38□□□□□ -1.87
PCDH9-203ENST00000456367 LINC01556Q5JQF7 62 aa3.38□□□□□ -1.87
PCDH9-203ENST00000456367 CSPG4Q6UVK1 2322 aa3.38□□□□□ -1.87
PCDH9-203ENST00000456367 C9orf129Q5T035 196 aaKnown RBP3.38□□□□□ -1.87
PCDH9-203ENST00000456367 Q6ZRP5 223 aa3.38□□□□□ -1.87
PCDH9-203ENST00000456367 BRCA2P51587 3418 aa3.38□□□□□ -1.87
PCDH9-203ENST00000456367 FSHBP01225 129 aa3.38□□□□□ -1.87
PCDH9-203ENST00000456367 Q75L30 129 aa3.37□□□□□ -1.87
PCDH9-203ENST00000456367 EPM2AB3EWF7 344 aa3.37□□□□□ -1.87
PCDH9-203ENST00000456367 PLA2G2AP14555 144 aa3.37□□□□□ -1.87
PCDH9-203ENST00000456367 PTPRQQ9UMZ3 2332 aa3.36□□□□□ -1.87
PCDH9-203ENST00000456367 OXTP01178 125 aa3.36□□□□□ -1.87
PCDH9-203ENST00000456367 IGLV5-48A0A075B6I7 105 aa3.35□□□□□ -1.87
PCDH9-203ENST00000456367 PLA2G2DQ9UNK4 145 aa3.35□□□□□ -1.87
PCDH9-203ENST00000456367 J3QKU1 62 aa3.35□□□□□ -1.87
PCDH9-203ENST00000456367 DNAH14Q0VDD8 3507 aa3.35□□□□□ -1.87
PCDH9-203ENST00000456367 MUC4Q99102 2169 aa3.35□□□□□ -1.87
PCDH9-203ENST00000456367 MIR22HGQ0VDD5 57 aa3.35□□□□□ -1.87
PCDH9-203ENST00000456367 COL27A1Q8IZC6 1860 aaPredicted RBP3.35□□□□□ -1.87
PCDH9-203ENST00000456367 CYSTM1Q9H1C7 97 aa3.35□□□□□ -1.87
PCDH9-203ENST00000456367 NOTCH2Q04721 2471 aa3.35□□□□□ -1.87
PCDH9-203ENST00000456367 SRCAPQ6ZRS2 3230 aa3.35□□□□□ -1.87
PCDH9-203ENST00000456367 PRLHP81277 87 aa3.34□□□□□ -1.87
PCDH9-203ENST00000456367 Q8N377 158 aa3.34□□□□□ -1.87
PCDH9-203ENST00000456367 MRPL34Q9BQ48 92 aaKnown RBP3.34□□□□□ -1.87
PCDH9-203ENST00000456367 SPG11Q96JI7 2443 aa3.34□□□□□ -1.87
PCDH9-203ENST00000456367 A0A1W2PPR1 153 aa3.34□□□□□ -1.87
PCDH9-203ENST00000456367 FAM229AH3BQW9 127 aa3.34□□□□□ -1.87
PCDH9-203ENST00000456367 PRR34Q9NV39 138 aa3.34□□□□□ -1.88
PCDH9-203ENST00000456367 RPL37AP61513 92 aaKnown RBP3.33□□□□□ -1.88
PCDH9-203ENST00000456367 PRO3102Q9H379 93 aa3.33□□□□□ -1.88
PCDH9-203ENST00000456367 PCNTO95613 3336 aa3.33□□□□□ -1.88
PCDH9-203ENST00000456367 X6R8D5 127 aa3.33□□□□□ -1.88
PCDH9-203ENST00000456367 IGLV1-50A0A075B6I6 118 aa3.33□□□□□ -1.88
PCDH9-203ENST00000456367 PCSK5Q92824 1860 aa3.33□□□□□ -1.88
PCDH9-203ENST00000456367 LINC01558Q9Y6Z2 57 aa3.32□□□□□ -1.88
PCDH9-203ENST00000456367 LINC01554Q52M75 96 aa3.32□□□□□ -1.88
PCDH9-203ENST00000456367 ST20-AS1Q8NBB2 130 aa3.32□□□□□ -1.88
PCDH9-203ENST00000456367 IGLV7-46A0A075B6I9 117 aa3.32□□□□□ -1.88
PCDH9-203ENST00000456367 TLX1NBP0CAT3 122 aa3.32□□□□□ -1.88
PCDH9-203ENST00000456367 ASB16-AS1Q495Z4 193 aa3.32□□□□□ -1.88
PCDH9-203ENST00000456367 LINC00612Q8N6U2 182 aa3.32□□□□□ -1.88
PCDH9-203ENST00000456367 Q8N9P0 234 aaPredicted RBP3.32□□□□□ -1.88
PCDH9-203ENST00000456367 LINC00588Q9Y4M8 146 aa3.32□□□□□ -1.88
PCDH9-203ENST00000456367 IGFL1Q6UW32 110 aa3.32□□□□□ -1.88
PCDH9-203ENST00000456367 SPRR4Q96PI1 79 aa3.32□□□□□ -1.88
PCDH9-203ENST00000456367 A0A1W2PNM2 257 aa3.31□□□□□ -1.88
PCDH9-203ENST00000456367 FAM104AQ969W3 186 aa3.31□□□□□ -1.88
PCDH9-203ENST00000456367 ACACBO00763 2458 aa3.31□□□□□ -1.88
PCDH9-203ENST00000456367 CIRBP-AS1Q8TBR5 109 aa3.31□□□□□ -1.88
PCDH9-203ENST00000456367 C8orf17Q9NRJ1 99 aa3.31□□□□□ -1.88
PCDH9-203ENST00000456367 HIVEP2P31629 2446 aa3.31□□□□□ -1.88
PCDH9-203ENST00000456367 C16orf90A8MZG2 172 aa3.31□□□□□ -1.88
PCDH9-203ENST00000456367 M0R2N4 97 aa3.3□□□□□ -1.88
PCDH9-203ENST00000456367 FAM229BQ4G0N7 80 aa3.3□□□□□ -1.88
PCDH9-203ENST00000456367 PHF5AQ7RTV0 110 aaKnown RBP3.3□□□□□ -1.88
PCDH9-203ENST00000456367 SPINK1P00995 79 aa3.3□□□□□ -1.88
PCDH9-203ENST00000456367 WDFY3Q8IZQ1 3526 aa3.3□□□□□ -1.88
PCDH9-203ENST00000456367 A0A096LNT2 108 aa3.3□□□□□ -1.88
PCDH9-203ENST00000456367 CSNK1G2-AS1Q8NCQ2 148 aa3.3□□□□□ -1.88
PCDH9-203ENST00000456367 FAM208BQ5VWN6 2430 aa3.29□□□□□ -1.88
PCDH9-203ENST00000456367 Q5VV11 94 aa3.29□□□□□ -1.88
PCDH9-203ENST00000456367 SPINT4Q6UDR6 99 aa3.29□□□□□ -1.88
PCDH9-203ENST00000456367 OTOGLQ3ZCN5 2332 aa3.29□□□□□ -1.88
PCDH9-203ENST00000456367 A0A1B0GVX0 72 aa3.29□□□□□ -1.88
PCDH9-203ENST00000456367 IGKV2D-30A0A075B6S6 120 aa3.29□□□□□ -1.88
PCDH9-203ENST00000456367 IGKV2-30P06310 120 aa3.29□□□□□ -1.88
PCDH9-203ENST00000456367 IGLV5-37A0A075B6J1 123 aa3.29□□□□□ -1.88
PCDH9-203ENST00000456367 LINC00313P59037 77 aa3.29□□□□□ -1.88
PCDH9-203ENST00000456367 DOPEY1Q5JWR5 2465 aa3.28□□□□□ -1.88
PCDH9-203ENST00000456367 MYO9AB2RTY4 2548 aa3.28□□□□□ -1.88
PCDH9-203ENST00000456367 DNAH10OSP0CZ25 163 aa3.28□□□□□ -1.88
PCDH9-203ENST00000456367 DSCR10P59022 87 aa3.28□□□□□ -1.88
PCDH9-203ENST00000456367 ZFHX4Q86UP3 3567 aa3.27□□□□□ -1.89
PCDH9-203ENST00000456367 C15orf56Q8N910 161 aa3.27□□□□□ -1.89
PCDH9-203ENST00000456367 Q8NAQ8 132 aa3.27□□□□□ -1.89
PCDH9-203ENST00000456367 SPTBN5Q9NRC6 3674 aaKnown RBP3.27□□□□□ -1.89
PCDH9-203ENST00000456367 PTPN13Q12923 2485 aa3.26□□□□□ -1.89
PCDH9-203ENST00000456367 NUPR2A6NF83 97 aa3.26□□□□□ -1.89
PCDH9-203ENST00000456367 NAV2Q8IVL1 2488 aa3.26□□□□□ -1.89
PCDH9-203ENST00000456367 ZFHX2Q9C0A1 2572 aaPredicted RBP3.26□□□□□ -1.89
PCDH9-203ENST00000456367 CUL9Q8IWT3 2517 aa3.25□□□□□ -1.89
PCDH9-203ENST00000456367 GIG44P09565 113 aaPredicted RBP3.24□□□□□ -1.89
PCDH9-203ENST00000456367 SSBP3-AS1Q7Z2R9 100 aa3.24□□□□□ -1.89
PCDH9-203ENST00000456367 BDP1A6H8Y1 2624 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms