RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 TLN2Q9Y4G6 2542 aa9.27□□□□□ -0.93
PTPRE-204ENST00000455661 COX7BP24311 80 aa9.27□□□□□ -0.93
PTPRE-204ENST00000455661 SPTBN4Q9H254 2564 aa9.27□□□□□ -0.93
PTPRE-204ENST00000455661 X6R8D5 127 aa9.26□□□□□ -0.93
PTPRE-204ENST00000455661 NREPQ16612 68 aa9.26□□□□□ -0.93
PTPRE-204ENST00000455661 NBPF19A0A087WUL8 3843 aa9.25□□□□□ -0.93
PTPRE-204ENST00000455661 AKAP9Q99996 3911 aa9.25□□□□□ -0.93
PTPRE-204ENST00000455661 TRBV7-6A0A0J9YX20 115 aa9.25□□□□□ -0.93
PTPRE-204ENST00000455661 LYRM9A8MSI8 78 aa9.25□□□□□ -0.93
PTPRE-204ENST00000455661 ZNF73O43830 326 aaPredicted RBP9.25□□□□□ -0.93
PTPRE-204ENST00000455661 TEX15Q9BXT5 2789 aa9.24□□□□□ -0.93
PTPRE-204ENST00000455661 JMJD1CQ15652 2540 aa9.24□□□□□ -0.93
PTPRE-204ENST00000455661 BPY2O14599 106 aa9.24□□□□□ -0.93
PTPRE-204ENST00000455661 FP248Q71RG6 208 aaPredicted RBP9.24□□□□□ -0.93
PTPRE-204ENST00000455661 C16orf95Q9H693 158 aa9.24□□□□□ -0.93
PTPRE-204ENST00000455661 POLQO75417 2590 aa9.24□□□□□ -0.93
PTPRE-204ENST00000455661 GVQW2A0A096LPI5 108 aaPredicted RBP9.23□□□□□ -0.93
PTPRE-204ENST00000455661 UTP20O75691 2785 aaKnown RBP9.23□□□□□ -0.93
PTPRE-204ENST00000455661 ERC2-IT1O76042 136 aa9.23□□□□□ -0.93
PTPRE-204ENST00000455661 SETXQ7Z333 2677 aaKnown RBP9.23□□□□□ -0.93
PTPRE-204ENST00000455661 FLNCQ14315 2725 aa9.22□□□□□ -0.93
PTPRE-204ENST00000455661 ELOF1P60002 83 aaKnown RBP9.22□□□□□ -0.93
PTPRE-204ENST00000455661 TMEM254Q8TBM7 123 aa9.22□□□□□ -0.93
PTPRE-204ENST00000455661 XAGE1AQ9HD64 81 aa9.21□□□□□ -0.93
PTPRE-204ENST00000455661 CUBNO60494 3623 aa9.21□□□□□ -0.93
PTPRE-204ENST00000455661 FBN2P35556 2912 aa9.21□□□□□ -0.94
PTPRE-204ENST00000455661 DAD1P61803 113 aa9.2□□□□□ -0.94
PTPRE-204ENST00000455661 C6orf48Q9UBA6 75 aa9.2□□□□□ -0.94
PTPRE-204ENST00000455661 LELP1Q5T871 98 aa9.19□□□□□ -0.94
PTPRE-204ENST00000455661 KRTAP1-3Q8IUG1 177 aa9.19□□□□□ -0.94
PTPRE-204ENST00000455661 C1orf43Q9BWL3 253 aa9.19□□□□□ -0.94
PTPRE-204ENST00000455661 LINC00474Q9P2X8 69 aa9.19□□□□□ -0.94
PTPRE-204ENST00000455661 KLK12Q9UKR0 248 aa9.19□□□□□ -0.94
PTPRE-204ENST00000455661 PKD1L2Q7Z442 2459 aa9.18□□□□□ -0.94
PTPRE-204ENST00000455661 CFAP46Q8IYW2 2715 aa9.18□□□□□ -0.94
PTPRE-204ENST00000455661 EPG5Q9HCE0 2579 aa9.18□□□□□ -0.94
PTPRE-204ENST00000455661 DEFB4AO15263 64 aa9.18□□□□□ -0.94
PTPRE-204ENST00000455661 WFDC11Q8NEX6 87 aa9.17□□□□□ -0.94
PTPRE-204ENST00000455661 PRR34Q9NV39 138 aa9.17□□□□□ -0.94
PTPRE-204ENST00000455661 M0R378 163 aa9.16□□□□□ -0.94
PTPRE-204ENST00000455661 ACACBO00763 2458 aa9.15□□□□□ -0.94
PTPRE-204ENST00000455661 NAV2Q8IVL1 2488 aa9.15□□□□□ -0.94
PTPRE-204ENST00000455661 PRYO14603 147 aa9.15□□□□□ -0.94
PTPRE-204ENST00000455661 IGKV4-1P06312 121 aa9.15□□□□□ -0.94
PTPRE-204ENST00000455661 Q8N9L7 120 aa9.15□□□□□ -0.95
PTPRE-204ENST00000455661 LRRK2Q5S007 2527 aa9.15□□□□□ -0.95
PTPRE-204ENST00000455661 VPREB1P12018 145 aa9.14□□□□□ -0.95
PTPRE-204ENST00000455661 DEFB135Q30KP9 77 aa9.14□□□□□ -0.95
PTPRE-204ENST00000455661 HIGD2BQ4VC39 106 aa9.14□□□□□ -0.95
PTPRE-204ENST00000455661 FN1P02751 2386 aaKnown RBP9.13□□□□□ -0.95
PTPRE-204ENST00000455661 A0A0U1RQV1 116 aa9.13□□□□□ -0.95
PTPRE-204ENST00000455661 LINC00528Q8N1L1 170 aa9.13□□□□□ -0.95
PTPRE-204ENST00000455661 CAMK2N2Q96S95 79 aa9.13□□□□□ -0.95
PTPRE-204ENST00000455661 OCR1Q9BZK8 76 aa9.13□□□□□ -0.95
PTPRE-204ENST00000455661 FAM208BQ5VWN6 2430 aa9.13□□□□□ -0.95
PTPRE-204ENST00000455661 HTN3P15516 51 aa9.13□□□□□ -0.95
PTPRE-204ENST00000455661 FUSP35637 526 aaKnown RBP eCLIP9.13□□□□□ -0.95
PTPRE-204ENST00000455661 PTPN13Q12923 2485 aa9.12□□□□□ -0.95
PTPRE-204ENST00000455661 MYO18BQ8IUG5 2567 aa9.12□□□□□ -0.95
PTPRE-204ENST00000455661 BRK1Q8WUW1 75 aa9.11□□□□□ -0.95
PTPRE-204ENST00000455661 CELA1Q9UNI1 258 aa9.11□□□□□ -0.95
PTPRE-204ENST00000455661 SONP18583 2426 aaKnown RBP9.11□□□□□ -0.95
PTPRE-204ENST00000455661 NIPBLQ6KC79 2804 aaeCLIP9.11□□□□□ -0.95
PTPRE-204ENST00000455661 PRB1P04280 392 aa9.1□□□□□ -0.95
PTPRE-204ENST00000455661 APOC4P55056 127 aa9.1□□□□□ -0.95
PTPRE-204ENST00000455661 EGFEM1PQ0D2K5 195 aa9.1□□□□□ -0.95
PTPRE-204ENST00000455661 MPLKIPQ8TAP9 179 aa9.1□□□□□ -0.95
PTPRE-204ENST00000455661 PKIGQ9Y2B9 76 aa9.1□□□□□ -0.95
PTPRE-204ENST00000455661 SPART-AS1P0CW21 52 aa9.09□□□□□ -0.95
PTPRE-204ENST00000455661 ESRGQ1W209 222 aa9.09□□□□□ -0.95
PTPRE-204ENST00000455661 NF1P21359 2839 aa9.08□□□□□ -0.96
PTPRE-204ENST00000455661 C3orf84H3BNL1 204 aa9.08□□□□□ -0.96
PTPRE-204ENST00000455661 FAM229BQ4G0N7 80 aa9.08□□□□□ -0.96
PTPRE-204ENST00000455661 CENPEQ02224 2701 aa9.08□□□□□ -0.96
PTPRE-204ENST00000455661 HIGD2AQ9BW72 106 aa9.08□□□□□ -0.96
PTPRE-204ENST00000455661 IGSF10Q6WRI0 2623 aa9.07□□□□□ -0.96
PTPRE-204ENST00000455661 Q6ZRU5 148 aa9.06□□□□□ -0.96
PTPRE-204ENST00000455661 Q6ZTC4 211 aa9.06□□□□□ -0.96
PTPRE-204ENST00000455661 ABCA12Q86UK0 2595 aa9.06□□□□□ -0.96
PTPRE-204ENST00000455661 SETD2Q9BYW2 2564 aaPredicted RBP9.06□□□□□ -0.96
PTPRE-204ENST00000455661 Q8NAQ8 132 aa9.05□□□□□ -0.96
PTPRE-204ENST00000455661 ZNF469Q96JG9 3925 aaPredicted RBP9.05□□□□□ -0.96
PTPRE-204ENST00000455661 DEFB105AQ8NG35 78 aa9.05□□□□□ -0.96
PTPRE-204ENST00000455661 A0A1B0GW54 56 aa9.03□□□□□ -0.96
PTPRE-204ENST00000455661 ZFYVE26Q68DK2 2539 aa9.03□□□□□ -0.96
PTPRE-204ENST00000455661 KPRPQ5T749 579 aaPredicted RBP9.03□□□□□ -0.96
PTPRE-204ENST00000455661 KRTAP10-3P60369 221 aa9.02□□□□□ -0.97
PTPRE-204ENST00000455661 FAM30AQ9NZY2 134 aa9.02□□□□□ -0.97
PTPRE-204ENST00000455661 CACNA1AO00555 2505 aa9.02□□□□□ -0.97
PTPRE-204ENST00000455661 IGLV5-48A0A075B6I7 105 aa9.02□□□□□ -0.97
PTPRE-204ENST00000455661 SMIM29Q86T20 159 aa9.02□□□□□ -0.97
PTPRE-204ENST00000455661 GCN1Q92616 2671 aaKnown RBP9.02□□□□□ -0.97
PTPRE-204ENST00000455661 KRTAP1-1Q07627 177 aa9.01□□□□□ -0.97
PTPRE-204ENST00000455661 Q8N377 158 aa9.01□□□□□ -0.97
PTPRE-204ENST00000455661 NKAPP1Q8N9T2 125 aa9.01□□□□□ -0.97
PTPRE-204ENST00000455661 ITPR3Q14573 2671 aa9.01□□□□□ -0.97
PTPRE-204ENST00000455661 APCP25054 2843 aa9.01□□□□□ -0.97
PTPRE-204ENST00000455661 NBEAL2Q6ZNJ1 2754 aa9.01□□□□□ -0.97
PTPRE-204ENST00000455661 C1orf195Q5TG92 126 aa9□□□□□ -0.97
PTPRE-204ENST00000455661 KCNQ1DNQ9H478 68 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms