RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 FAM218AQ96MZ4 157 aa2.76□□□□□ -1.97
GTF3C3-208ENST00000455546 SCGB3A1Q96QR1 104 aa2.76□□□□□ -1.97
GTF3C3-208ENST00000455546 NXT2Q9NPJ8 142 aaKnown RBP2.76□□□□□ -1.97
GTF3C3-208ENST00000455546 F8VRH5 84 aa2.75□□□□□ -1.97
GTF3C3-208ENST00000455546 NUPR1O60356 82 aa2.75□□□□□ -1.97
GTF3C3-208ENST00000455546 BCE1O60756 84 aa2.75□□□□□ -1.97
GTF3C3-208ENST00000455546 RPL13AP40429 203 aaKnown RBP2.75□□□□□ -1.97
GTF3C3-208ENST00000455546 RAB14P61106 215 aa2.75□□□□□ -1.97
GTF3C3-208ENST00000455546 ERASQ7Z444 233 aa2.75□□□□□ -1.97
GTF3C3-208ENST00000455546 TYMSOSQ8TAI1 123 aa2.75□□□□□ -1.97
GTF3C3-208ENST00000455546 COX7B2Q8TF08 81 aa2.75□□□□□ -1.97
GTF3C3-208ENST00000455546 TIMM17AQ99595 171 aa2.75□□□□□ -1.97
GTF3C3-208ENST00000455546 RETNLBQ9BQ08 111 aa2.75□□□□□ -1.97
GTF3C3-208ENST00000455546 CST9LQ9H4G1 147 aa2.75□□□□□ -1.97
GTF3C3-208ENST00000455546 CARHSP1Q9Y2V2 147 aaKnown RBP2.75□□□□□ -1.97
GTF3C3-208ENST00000455546 TINCRA0A1B0GVN0 87 aa2.74□□□□□ -1.97
GTF3C3-208ENST00000455546 K7EMI3 77 aa2.74□□□□□ -1.97
GTF3C3-208ENST00000455546 G0S2P27469 103 aa2.74□□□□□ -1.97
GTF3C3-208ENST00000455546 PFN2P35080 140 aa2.74□□□□□ -1.97
GTF3C3-208ENST00000455546 RPL28P46779 137 aaKnown RBP2.74□□□□□ -1.97
GTF3C3-208ENST00000455546 NDUFA6P56556 154 aa2.74□□□□□ -1.97
GTF3C3-208ENST00000455546 SEC11AP67812 179 aa2.74□□□□□ -1.97
GTF3C3-208ENST00000455546 PDZD11Q5EBL8 140 aa2.74□□□□□ -1.97
GTF3C3-208ENST00000455546 KRTAP9-8Q9BYQ0 159 aa2.74□□□□□ -1.97
GTF3C3-208ENST00000455546 TP73-AS1Q9UF72 201 aa2.74□□□□□ -1.97
GTF3C3-208ENST00000455546 IGKV2-28A0A075B6P5 120 aa2.73□□□□□ -1.97
GTF3C3-208ENST00000455546 TMEM218A2RU14 115 aa2.73□□□□□ -1.97
GTF3C3-208ENST00000455546 IGKV2D-28P01615 120 aa2.73□□□□□ -1.97
GTF3C3-208ENST00000455546 CRYGAP11844 174 aa2.73□□□□□ -1.97
GTF3C3-208ENST00000455546 CXCL5P42830 114 aa2.73□□□□□ -1.97
GTF3C3-208ENST00000455546 UBE2AP49459 152 aa2.73□□□□□ -1.97
GTF3C3-208ENST00000455546 PRLHP81277 87 aa2.73□□□□□ -1.97
GTF3C3-208ENST00000455546 PMVKQ15126 192 aa2.73□□□□□ -1.97
GTF3C3-208ENST00000455546 KRTAP13-2Q52LG2 175 aa2.73□□□□□ -1.97
GTF3C3-208ENST00000455546 ZNF625Q96I27 306 aaPredicted RBP2.73□□□□□ -1.97
GTF3C3-208ENST00000455546 LINC01546A6NGU7 62 aa2.72□□□□□ -1.97
GTF3C3-208ENST00000455546 TMEM238C9JI98 176 aa2.72□□□□□ -1.97
GTF3C3-208ENST00000455546 IFITM2Q01629 132 aa2.72□□□□□ -1.97
GTF3C3-208ENST00000455546 FABP9Q0Z7S8 132 aa2.72□□□□□ -1.97
GTF3C3-208ENST00000455546 PMCHL1Q16048 86 aa2.72□□□□□ -1.97
GTF3C3-208ENST00000455546 CLLU1Q5K131 121 aa2.72□□□□□ -1.97
GTF3C3-208ENST00000455546 FA2HQ7L5A8 372 aa2.72□□□□□ -1.97
GTF3C3-208ENST00000455546 FAM19A1Q7Z5A9 133 aa2.72□□□□□ -1.97
GTF3C3-208ENST00000455546 KRTAP13-1Q8IUC0 172 aa2.72□□□□□ -1.97
GTF3C3-208ENST00000455546 NKAPP1Q8N9T2 125 aa2.72□□□□□ -1.97
GTF3C3-208ENST00000455546 GNB1LQ9BYB4 327 aa2.72□□□□□ -1.97
GTF3C3-208ENST00000455546 SMCO4Q9NRQ5 59 aa2.72□□□□□ -1.97
GTF3C3-208ENST00000455546 TRAV9-1A0A075B6T8 112 aa2.71□□□□□ -1.98
GTF3C3-208ENST00000455546 A0A096LNJ9 63 aa2.71□□□□□ -1.98
GTF3C3-208ENST00000455546 A0A0U1RRA0 63 aa2.71□□□□□ -1.98
GTF3C3-208ENST00000455546 H3BRM9 83 aa2.71□□□□□ -1.98
GTF3C3-208ENST00000455546 ATP5LO75964 103 aa2.71□□□□□ -1.98
GTF3C3-208ENST00000455546 S100PP25815 95 aa2.71□□□□□ -1.98
GTF3C3-208ENST00000455546 Q8NDZ9 215 aa2.71□□□□□ -1.98
GTF3C3-208ENST00000455546 SND1-IT1Q9HBX3 110 aa2.71□□□□□ -1.98
GTF3C3-208ENST00000455546 RPS10P5Q9NQ39 176 aa2.71□□□□□ -1.98
GTF3C3-208ENST00000455546 IGKV2D-26A0A0A0MRZ7 120 aa2.7□□□□□ -1.98
GTF3C3-208ENST00000455546 M0R378 163 aa2.7□□□□□ -1.98
GTF3C3-208ENST00000455546 LINC00614P0C842 121 aa2.7□□□□□ -1.98
GTF3C3-208ENST00000455546 IGLC3P0DOY3 106 aa2.7□□□□□ -1.98
GTF3C3-208ENST00000455546 ZNF22P17026 224 aaPredicted RBP2.7□□□□□ -1.98
GTF3C3-208ENST00000455546 UQCC3Q6UW78 93 aa2.7□□□□□ -1.98
GTF3C3-208ENST00000455546 Q6ZVQ6 151 aa2.7□□□□□ -1.98
GTF3C3-208ENST00000455546 BAGE3Q86Y29 109 aa2.7□□□□□ -1.98
GTF3C3-208ENST00000455546 C3orf22Q8N5N4 141 aa2.7□□□□□ -1.98
GTF3C3-208ENST00000455546 LINC00304Q8N9R0 145 aa2.7□□□□□ -1.98
GTF3C3-208ENST00000455546 PLEKHB2Q96CS7 222 aa2.7□□□□□ -1.98
GTF3C3-208ENST00000455546 SEC11CQ9BY50 192 aa2.7□□□□□ -1.98
GTF3C3-208ENST00000455546 TMEM126AQ9H061 195 aa2.7□□□□□ -1.98
GTF3C3-208ENST00000455546 ERG28Q9UKR5 140 aa2.7□□□□□ -1.98
GTF3C3-208ENST00000455546 TRAPPC1Q9Y5R8 145 aa2.7□□□□□ -1.98
GTF3C3-208ENST00000455546 MUC2Q02817 5179 aa2.69□□□□□ -1.98
GTF3C3-208ENST00000455546 IGLV7-46A0A075B6I9 117 aa2.69□□□□□ -1.98
GTF3C3-208ENST00000455546 LINC01549A6NIU2 74 aa2.69□□□□□ -1.98
GTF3C3-208ENST00000455546 C11orf86A6NJI1 115 aa2.69□□□□□ -1.98
GTF3C3-208ENST00000455546 ATP6V1G1O75348 118 aa2.69□□□□□ -1.98
GTF3C3-208ENST00000455546 LINC00158P58513 81 aa2.69□□□□□ -1.98
GTF3C3-208ENST00000455546 TMEM170BQ5T4T1 132 aa2.69□□□□□ -1.98
GTF3C3-208ENST00000455546 COMMD7Q86VX2 200 aa2.69□□□□□ -1.98
GTF3C3-208ENST00000455546 CBLN2Q8IUK8 224 aa2.69□□□□□ -1.98
GTF3C3-208ENST00000455546 C18orf32Q8TCD1 76 aa2.69□□□□□ -1.98
GTF3C3-208ENST00000455546 HIGD2AQ9BW72 106 aa2.69□□□□□ -1.98
GTF3C3-208ENST00000455546 HBDP02042 147 aa2.68□□□□□ -1.98
GTF3C3-208ENST00000455546 COX17Q14061 63 aa2.68□□□□□ -1.98
GTF3C3-208ENST00000455546 COX19Q49B96 90 aa2.68□□□□□ -1.98
GTF3C3-208ENST00000455546 FAM229BQ4G0N7 80 aa2.68□□□□□ -1.98
GTF3C3-208ENST00000455546 C10orf91Q5T1B1 145 aa2.68□□□□□ -1.98
GTF3C3-208ENST00000455546 DAND5Q8N907 189 aa2.68□□□□□ -1.98
GTF3C3-208ENST00000455546 PPDPFQ9H3Y8 114 aa2.68□□□□□ -1.98
GTF3C3-208ENST00000455546 A0A0U1RQV1 116 aa2.67□□□□□ -1.98
GTF3C3-208ENST00000455546 SMIM13P0DJ93 91 aa2.67□□□□□ -1.98
GTF3C3-208ENST00000455546 SMCR5Q8TEV8 140 aa2.67□□□□□ -1.98
GTF3C3-208ENST00000455546 CHTOPQ9Y3Y2 248 aaKnown RBP2.67□□□□□ -1.98
GTF3C3-208ENST00000455546 TMEM223A0PJW6 202 aa2.66□□□□□ -1.98
GTF3C3-208ENST00000455546 NCR3O14931 201 aa2.66□□□□□ -1.98
GTF3C3-208ENST00000455546 APOC3P02656 99 aa2.66□□□□□ -1.98
GTF3C3-208ENST00000455546 HERV-K104P63124 156 aa2.66□□□□□ -1.98
GTF3C3-208ENST00000455546 RHEBQ15382 184 aa2.66□□□□□ -1.98
GTF3C3-208ENST00000455546 TPRXLQ17RH7 258 aa2.66□□□□□ -1.98
GTF3C3-208ENST00000455546 BOD1L2Q8IYS8 172 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms