RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 FSIP2Q5CZC0 6907 aa10.5□□□□□ -0.73
MSH6-206ENST00000455383 Q8NBF4 154 aa10.5□□□□□ -0.73
MSH6-206ENST00000455383 ZNF706Q9Y5V0 76 aaPredicted RBP10.5□□□□□ -0.73
MSH6-206ENST00000455383 DAND5Q8N907 189 aa10.49□□□□□ -0.73
MSH6-206ENST00000455383 ZNF625Q96I27 306 aaPredicted RBP10.49□□□□□ -0.73
MSH6-206ENST00000455383 SPINK1P00995 79 aa10.48□□□□□ -0.73
MSH6-206ENST00000455383 SEC61BP60468 96 aaKnown RBP10.48□□□□□ -0.73
MSH6-206ENST00000455383 SFTA2Q6UW10 78 aa10.47□□□□□ -0.73
MSH6-206ENST00000455383 FA2HQ7L5A8 372 aa10.47□□□□□ -0.73
MSH6-206ENST00000455383 CRCT1Q9UGL9 99 aa10.47□□□□□ -0.73
MSH6-206ENST00000455383 A0A096LNJ9 63 aa10.46□□□□□ -0.73
MSH6-206ENST00000455383 SPRR1AP35321 89 aa10.45□□□□□ -0.74
MSH6-206ENST00000455383 SMCO4Q9NRQ5 59 aa10.45□□□□□ -0.74
MSH6-206ENST00000455383 C11orf86A6NJI1 115 aa10.43□□□□□ -0.74
MSH6-206ENST00000455383 KRTAP4-16G5E9R7 235 aaPredicted RBP10.43□□□□□ -0.74
MSH6-206ENST00000455383 PRYO14603 147 aa10.43□□□□□ -0.74
MSH6-206ENST00000455383 NDUFA6P56556 154 aa10.43□□□□□ -0.74
MSH6-206ENST00000455383 LINC00483Q53H64 154 aa10.43□□□□□ -0.74
MSH6-206ENST00000455383 SMCR5Q8TEV8 140 aa10.43□□□□□ -0.74
MSH6-206ENST00000455383 LINC00158P58513 81 aa10.41□□□□□ -0.74
MSH6-206ENST00000455383 RPS29P62273 56 aaKnown RBP10.41□□□□□ -0.74
MSH6-206ENST00000455383 COX19Q49B96 90 aa10.41□□□□□ -0.74
MSH6-206ENST00000455383 URB1-AS1Q96HZ7 61 aa10.41□□□□□ -0.74
MSH6-206ENST00000455383 KCNQ1DNQ9H478 68 aa10.41□□□□□ -0.74
MSH6-206ENST00000455383 LCE2CQ5TA81 110 aa10.4□□□□□ -0.74
MSH6-206ENST00000455383 XP32Q5T750 250 aa10.39□□□□□ -0.75
MSH6-206ENST00000455383 Q8N377 158 aa10.39□□□□□ -0.75
MSH6-206ENST00000455383 S100PP25815 95 aa10.38□□□□□ -0.75
MSH6-206ENST00000455383 FABP9Q0Z7S8 132 aa10.38□□□□□ -0.75
MSH6-206ENST00000455383 TMEM170BQ5T4T1 132 aa10.38□□□□□ -0.75
MSH6-206ENST00000455383 HBDP02042 147 aa10.37□□□□□ -0.75
MSH6-206ENST00000455383 BAGE3Q86Y29 109 aa10.37□□□□□ -0.75
MSH6-206ENST00000455383 NDUFA12Q9UI09 145 aa10.37□□□□□ -0.75
MSH6-206ENST00000455383 A0A0U1RRA0 63 aa10.36□□□□□ -0.75
MSH6-206ENST00000455383 LINC00614P0C842 121 aa10.36□□□□□ -0.75
MSH6-206ENST00000455383 SSBP3-AS1Q7Z2R9 100 aa10.36□□□□□ -0.75
MSH6-206ENST00000455383 FAM19A2Q8N3H0 131 aa10.36□□□□□ -0.75
MSH6-206ENST00000455383 TMEM218A2RU14 115 aa10.35□□□□□ -0.75
MSH6-206ENST00000455383 BOD1L2Q8IYS8 172 aa10.35□□□□□ -0.75
MSH6-206ENST00000455383 ETDCA0A1B0GVM5 59 aa10.34□□□□□ -0.75
MSH6-206ENST00000455383 CLLU1Q5K131 121 aa10.34□□□□□ -0.75
MSH6-206ENST00000455383 TMEM223A0PJW6 202 aa10.33□□□□□ -0.76
MSH6-206ENST00000455383 NCR3O14931 201 aa10.33□□□□□ -0.76
MSH6-206ENST00000455383 SLC25A20O43772 301 aa10.33□□□□□ -0.76
MSH6-206ENST00000455383 SMIM13P0DJ93 91 aa10.33□□□□□ -0.76
MSH6-206ENST00000455383 MOBPQ13875 183 aa10.33□□□□□ -0.76
MSH6-206ENST00000455383 PMCHL1Q16048 86 aa10.33□□□□□ -0.76
MSH6-206ENST00000455383 KRTAP19-2Q3LHN2 52 aa10.33□□□□□ -0.76
MSH6-206ENST00000455383 GAGE2AQ6NT46 116 aa10.33□□□□□ -0.76
MSH6-206ENST00000455383 UQCC3Q6UW78 93 aa10.33□□□□□ -0.76
MSH6-206ENST00000455383 C18orf32Q8TCD1 76 aa10.33□□□□□ -0.76
MSH6-206ENST00000455383 TRBV10-3A0A0K0K1G6 114 aa10.32□□□□□ -0.76
MSH6-206ENST00000455383 B5MCH6 92 aa10.31□□□□□ -0.76
MSH6-206ENST00000455383 ERC2-IT1O76042 136 aa10.31□□□□□ -0.76
MSH6-206ENST00000455383 MIR7-3HGQ8N6C7 128 aa10.31□□□□□ -0.76
MSH6-206ENST00000455383 SEC11CQ9BY50 192 aa10.31□□□□□ -0.76
MSH6-206ENST00000455383 CHTOPQ9Y3Y2 248 aaKnown RBP10.31□□□□□ -0.76
MSH6-206ENST00000455383 IGLV9-49A0A0B4J1Y8 123 aa10.3□□□□□ -0.76
MSH6-206ENST00000455383 ATP6V1G1O75348 118 aa10.29□□□□□ -0.76
MSH6-206ENST00000455383 HERV-K104P63124 156 aa10.27□□□□□ -0.77
MSH6-206ENST00000455383 MT1HP80294 61 aa10.27□□□□□ -0.77
MSH6-206ENST00000455383 MEIG1Q5JSS6 88 aa10.27□□□□□ -0.77
MSH6-206ENST00000455383 Q9BRP9 147 aa10.27□□□□□ -0.77
MSH6-206ENST00000455383 TRAV12-1A0A0B4J245 112 aa10.25□□□□□ -0.77
MSH6-206ENST00000455383 LINC00587B1AMM8 73 aa10.25□□□□□ -0.77
MSH6-206ENST00000455383 LOC107984156A0A0G2JMH3 177 aa10.24□□□□□ -0.77
MSH6-206ENST00000455383 S100A12P80511 92 aa10.24□□□□□ -0.77
MSH6-206ENST00000455383 ARL17AQ8IVW1 177 aa10.24□□□□□ -0.77
MSH6-206ENST00000455383 TRAPPC1Q9Y5R8 145 aa10.24□□□□□ -0.77
MSH6-206ENST00000455383 Q6ZRX8 168 aa10.23□□□□□ -0.77
MSH6-206ENST00000455383 TRBV10-2A0A0K0K1G8 114 aa10.21□□□□□ -0.77
MSH6-206ENST00000455383 CFC1BP0CG36 223 aa10.21□□□□□ -0.77
MSH6-206ENST00000455383 DDTP30046 118 aa10.21□□□□□ -0.77
MSH6-206ENST00000455383 RHEBQ15382 184 aa10.21□□□□□ -0.77
MSH6-206ENST00000455383 C10orf91Q5T1B1 145 aa10.21□□□□□ -0.77
MSH6-206ENST00000455383 IFI27L1Q96BM0 104 aa10.2□□□□□ -0.78
MSH6-206ENST00000455383 MAP1LC3CQ9BXW4 147 aa10.2□□□□□ -0.78
MSH6-206ENST00000455383 RPS10P5Q9NQ39 176 aa10.19□□□□□ -0.78
MSH6-206ENST00000455383 MYMXA0A1B0GTQ4 84 aa10.18□□□□□ -0.78
MSH6-206ENST00000455383 LORP23490 312 aaPredicted RBP10.17□□□□□ -0.78
MSH6-206ENST00000455383 PCOTHQ58A44 107 aa10.17□□□□□ -0.78
MSH6-206ENST00000455383 IGLV6-57P01721 117 aa10.16□□□□□ -0.78
MSH6-206ENST00000455383 C9orf153Q5TBE3 101 aa10.16□□□□□ -0.78
MSH6-206ENST00000455383 CHCHD1Q96BP2 118 aaKnown RBP10.15□□□□□ -0.78
MSH6-206ENST00000455383 SPANXB1Q9NS25 103 aaPredicted RBP10.15□□□□□ -0.78
MSH6-206ENST00000455383 TSPEAR-AS2P59090 65 aa10.14□□□□□ -0.79
MSH6-206ENST00000455383 IFITM2Q01629 132 aa10.14□□□□□ -0.79
MSH6-206ENST00000455383 IGLV8-61A0A075B6I0 122 aa10.13□□□□□ -0.79
MSH6-206ENST00000455383 KRTAP10-6P60371 365 aaPredicted RBP10.13□□□□□ -0.79
MSH6-206ENST00000455383 JOSD1Q15040 202 aaPredicted RBP10.13□□□□□ -0.79
MSH6-206ENST00000455383 C5orf52A6NGY3 159 aa10.12□□□□□ -0.79
MSH6-206ENST00000455383 NDUFC2O95298 119 aa10.12□□□□□ -0.79
MSH6-206ENST00000455383 ST20-AS1Q8NBB2 130 aa10.12□□□□□ -0.79
MSH6-206ENST00000455383 TRAV23DV6A0A075B6W5 121 aa10.1□□□□□ -0.79
MSH6-206ENST00000455383 LEPROTO15243 131 aa10.1□□□□□ -0.79
MSH6-206ENST00000455383 COMMD7Q86VX2 200 aa10.1□□□□□ -0.79
MSH6-206ENST00000455383 S100A7L2Q5SY68 101 aa10.09□□□□□ -0.79
MSH6-206ENST00000455383 LIMD2Q9BT23 127 aa10.09□□□□□ -0.79
MSH6-206ENST00000455383 ZNF73O43830 326 aaPredicted RBP10.08□□□□□ -0.8
MSH6-206ENST00000455383 SPRR1BP22528 89 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms