RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 KRTAP10-1P60331 282 aa7.17□□□□□ -1.26
TRAF4-206ENST00000454852 RPL18AQ02543 176 aaKnown RBP7.17□□□□□ -1.26
TRAF4-206ENST00000454852 C9orf129Q5T035 196 aaKnown RBP7.17□□□□□ -1.26
TRAF4-206ENST00000454852 SPACA4Q8TDM5 124 aa7.17□□□□□ -1.26
TRAF4-206ENST00000454852 PLA2G2DQ9UNK4 145 aa7.17□□□□□ -1.26
TRAF4-206ENST00000454852 APOBP04114 4563 aaKnown RBP7.16□□□□□ -1.26
TRAF4-206ENST00000454852 IFITM1P13164 125 aa7.16□□□□□ -1.26
TRAF4-206ENST00000454852 GAGE2BQ13066 116 aa7.16□□□□□ -1.26
TRAF4-206ENST00000454852 A0A0U1RRA0 63 aa7.15□□□□□ -1.26
TRAF4-206ENST00000454852 HINT1P49773 126 aaPredicted RBP7.15□□□□□ -1.26
TRAF4-206ENST00000454852 BATFQ16520 125 aa7.15□□□□□ -1.26
TRAF4-206ENST00000454852 GAGE2EQ4V326 116 aa7.15□□□□□ -1.26
TRAF4-206ENST00000454852 COPS9Q8WXC6 57 aa7.15□□□□□ -1.26
TRAF4-206ENST00000454852 GAGE2DQ9UEU5 116 aa7.15□□□□□ -1.26
TRAF4-206ENST00000454852 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.15□□□□□ -1.26
TRAF4-206ENST00000454852 IGLV5-37A0A075B6J1 123 aa7.14□□□□□ -1.27
TRAF4-206ENST00000454852 PANO1I0J062 215 aa7.14□□□□□ -1.27
TRAF4-206ENST00000454852 TAL2Q16559 108 aa7.14□□□□□ -1.27
TRAF4-206ENST00000454852 COL5A1-AS1Q5SY13 56 aa7.14□□□□□ -1.27
TRAF4-206ENST00000454852 SOSTDC1Q6X4U4 206 aa7.14□□□□□ -1.27
TRAF4-206ENST00000454852 DAND5Q8N907 189 aa7.14□□□□□ -1.27
TRAF4-206ENST00000454852 LINC00308Q8TCZ7 52 aa7.14□□□□□ -1.27
TRAF4-206ENST00000454852 XAGE1AQ9HD64 81 aa7.14□□□□□ -1.27
TRAF4-206ENST00000454852 IGKV2-24A0A0C4DH68 120 aa7.13□□□□□ -1.27
TRAF4-206ENST00000454852 NDUFC2O95298 119 aa7.13□□□□□ -1.27
TRAF4-206ENST00000454852 CHTF8P0CG12 524 aa7.13□□□□□ -1.27
TRAF4-206ENST00000454852 HSD52Q0P140 79 aa7.13□□□□□ -1.27
TRAF4-206ENST00000454852 BVES-AS1Q5T3Y7 98 aa7.13□□□□□ -1.27
TRAF4-206ENST00000454852 PLAC8Q9NZF1 115 aa7.13□□□□□ -1.27
TRAF4-206ENST00000454852 FAM30AQ9NZY2 134 aa7.13□□□□□ -1.27
TRAF4-206ENST00000454852 KRTAP7-1Q8IUC3 87 aa7.12□□□□□ -1.27
TRAF4-206ENST00000454852 EIF4EBP3O60516 100 aaPredicted RBP7.11□□□□□ -1.27
TRAF4-206ENST00000454852 VPREB1P12018 145 aa7.11□□□□□ -1.27
TRAF4-206ENST00000454852 RPL24P83731 157 aaKnown RBP7.11□□□□□ -1.27
TRAF4-206ENST00000454852 SRSF9Q13242 221 aaKnown RBP eCLIP7.11□□□□□ -1.274e-6■■□□□ 11.4
TRAF4-206ENST00000454852 A0A087WYN8 130 aa7.1□□□□□ -1.27
TRAF4-206ENST00000454852 TRBV10-2A0A0K0K1G8 114 aa7.1□□□□□ -1.27
TRAF4-206ENST00000454852 A0A1W2PNN7 141 aa7.1□□□□□ -1.27
TRAF4-206ENST00000454852 SERTAD4-AS1Q5TG53 156 aa7.1□□□□□ -1.27
TRAF4-206ENST00000454852 MUSTN1Q8IVN3 82 aa7.1□□□□□ -1.27
TRAF4-206ENST00000454852 Q8NDZ9 215 aa7.1□□□□□ -1.27
TRAF4-206ENST00000454852 HIST1H4GQ99525 98 aa7.1□□□□□ -1.27
TRAF4-206ENST00000454852 A0A1B0GV90 55 aa7.09□□□□□ -1.27
TRAF4-206ENST00000454852 FAM168BA1KXE4 195 aa7.09□□□□□ -1.27
TRAF4-206ENST00000454852 RYR1P21817 5038 aa7.08□□□□□ -1.28
TRAF4-206ENST00000454852 CDK2AP2O75956 126 aa7.08□□□□□ -1.28
TRAF4-206ENST00000454852 SCXQ7RTU7 201 aa7.08□□□□□ -1.28
TRAF4-206ENST00000454852 CIRBP-AS1Q8TBR5 109 aa7.08□□□□□ -1.28
TRAF4-206ENST00000454852 BIRC6Q9NR09 4857 aa7.07□□□□□ -1.28
TRAF4-206ENST00000454852 A6NDN8 102 aa7.07□□□□□ -1.28
TRAF4-206ENST00000454852 XGP55808 180 aa7.07□□□□□ -1.28
TRAF4-206ENST00000454852 NPC2P61916 151 aa7.07□□□□□ -1.28
TRAF4-206ENST00000454852 CEND1Q8N111 149 aa7.07□□□□□ -1.28
TRAF4-206ENST00000454852 C22orf24Q9Y442 160 aa7.07□□□□□ -1.28
TRAF4-206ENST00000454852 IGKV2-28A0A075B6P5 120 aa7.06□□□□□ -1.28
TRAF4-206ENST00000454852 M0R378 163 aa7.06□□□□□ -1.28
TRAF4-206ENST00000454852 IGKV2D-28P01615 120 aa7.06□□□□□ -1.28
TRAF4-206ENST00000454852 FAM19A5Q7Z5A7 132 aaPredicted RBP7.06□□□□□ -1.28
TRAF4-206ENST00000454852 DPH3Q96FX2 82 aa7.06□□□□□ -1.28
TRAF4-206ENST00000454852 A4D1N5 150 aa7.05□□□□□ -1.28
TRAF4-206ENST00000454852 M0QXV9 152 aa7.05□□□□□ -1.28
TRAF4-206ENST00000454852 MRPL55Q7Z7F7 128 aaKnown RBP7.05□□□□□ -1.28
TRAF4-206ENST00000454852 NKAPP1Q8N9T2 125 aa7.05□□□□□ -1.28
TRAF4-206ENST00000454852 TMEM238LA0A1B0GVL6 79 aa7.04□□□□□ -1.28
TRAF4-206ENST00000454852 A6NJY4 79 aa7.04□□□□□ -1.28
TRAF4-206ENST00000454852 C7orf33Q8WU49 177 aa7.04□□□□□ -1.28
TRAF4-206ENST00000454852 HSPG2P98160 4391 aa7.04□□□□□ -1.28
TRAF4-206ENST00000454852 TAX1BP3O14907 124 aa7.03□□□□□ -1.28
TRAF4-206ENST00000454852 IGLV6-57P01721 117 aa7.03□□□□□ -1.28
TRAF4-206ENST00000454852 FXYD2P54710 66 aa7.03□□□□□ -1.28
TRAF4-206ENST00000454852 PRR3P79522 188 aaKnown RBP7.03□□□□□ -1.28
TRAF4-206ENST00000454852 LINC00337Q8N6G1 96 aa7.03□□□□□ -1.28
TRAF4-206ENST00000454852 LINC00167Q96N53 147 aa7.03□□□□□ -1.28
TRAF4-206ENST00000454852 KIAA1109Q2LD37 5005 aa7.03□□□□□ -1.28
TRAF4-206ENST00000454852 IGLV1-50A0A075B6I6 118 aa7.02□□□□□ -1.29
TRAF4-206ENST00000454852 TRAV13-2A0A0B4J235 113 aa7.02□□□□□ -1.29
TRAF4-206ENST00000454852 A0A0B4J2C4 111 aa7.02□□□□□ -1.29
TRAF4-206ENST00000454852 A0A1B0GWB2 263 aa7.02□□□□□ -1.29
TRAF4-206ENST00000454852 PHF5AQ7RTV0 110 aaKnown RBP7.02□□□□□ -1.29
TRAF4-206ENST00000454852 TMEM126AQ9H061 195 aa7.02□□□□□ -1.29
TRAF4-206ENST00000454852 NCR3O14931 201 aa7.01□□□□□ -1.29
TRAF4-206ENST00000454852 CFC1BP0CG36 223 aa7.01□□□□□ -1.29
TRAF4-206ENST00000454852 CFC1P0CG37 223 aa7.01□□□□□ -1.29
TRAF4-206ENST00000454852 KCNQ1DNQ9H478 68 aa7.01□□□□□ -1.29
TRAF4-206ENST00000454852 CBY1Q9Y3M2 126 aa7.01□□□□□ -1.29
TRAF4-206ENST00000454852 TRBV10-3A0A0K0K1G6 114 aa7□□□□□ -1.29
TRAF4-206ENST00000454852 FAT1Q14517 4588 aa7□□□□□ -1.29
TRAF4-206ENST00000454852 S100A7L2Q5SY68 101 aa6.99□□□□□ -1.29
TRAF4-206ENST00000454852 C9orf118A6NHY6 69 aa6.98□□□□□ -1.29
TRAF4-206ENST00000454852 PRYO14603 147 aa6.98□□□□□ -1.29
TRAF4-206ENST00000454852 SPRR1AP35321 89 aa6.98□□□□□ -1.29
TRAF4-206ENST00000454852 HAMPP81172 84 aa6.98□□□□□ -1.29
TRAF4-206ENST00000454852 KRTAP11-1Q8IUC1 163 aa6.98□□□□□ -1.29
TRAF4-206ENST00000454852 NHP2Q9NX24 153 aaKnown RBP6.98□□□□□ -1.29
TRAF4-206ENST00000454852 GAGE10A6NGK3 116 aa6.97□□□□□ -1.29
TRAF4-206ENST00000454852 UBE2BP63146 152 aa6.97□□□□□ -1.29
TRAF4-206ENST00000454852 VPS13BQ7Z7G8 4022 aa6.96□□□□□ -1.29
TRAF4-206ENST00000454852 TRAV23DV6A0A075B6W5 121 aa6.96□□□□□ -1.3
TRAF4-206ENST00000454852 RPL37AP8A6NKH3 93 aa6.96□□□□□ -1.3
TRAF4-206ENST00000454852 KRTAP4-16G5E9R7 235 aaPredicted RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms