RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 IGKV2D-28P01615 120 aa8.24□□□□□ -1.09
SMPD4-213ENST00000454468 CAMK2N2Q96S95 79 aa8.24□□□□□ -1.09
SMPD4-213ENST00000454468 C10orf25Q5T742 122 aa8.24□□□□□ -1.09
SMPD4-213ENST00000454468 LAMTOR3Q9UHA4 124 aa8.24□□□□□ -1.09
SMPD4-213ENST00000454468 CYSRT1A8MQ03 144 aa8.23□□□□□ -1.09
SMPD4-213ENST00000454468 Q8NAQ8 132 aa8.23□□□□□ -1.09
SMPD4-213ENST00000454468 TENM3Q9P273 2699 aa8.23□□□□□ -1.09
SMPD4-213ENST00000454468 A0A1B0GX51 115 aa8.23□□□□□ -1.09
SMPD4-213ENST00000454468 C6orf99Q4VX62 202 aa8.23□□□□□ -1.09
SMPD4-213ENST00000454468 DEFB131BA0A096LNP1 70 aa8.22□□□□□ -1.09
SMPD4-213ENST00000454468 IGKV3D-7A0A0C4DH55 119 aa8.22□□□□□ -1.09
SMPD4-213ENST00000454468 A0A1B0GUV1 79 aa8.21□□□□□ -1.1
SMPD4-213ENST00000454468 KRTAP24-1Q3LI83 254 aa8.21□□□□□ -1.1
SMPD4-213ENST00000454468 Q8IZM0 81 aa8.21□□□□□ -1.1
SMPD4-213ENST00000454468 LELP1Q5T871 98 aa8.21□□□□□ -1.1
SMPD4-213ENST00000454468 C11orf45Q8TAV5 145 aa8.21□□□□□ -1.1
SMPD4-213ENST00000454468 COX7CP15954 63 aa8.2□□□□□ -1.1
SMPD4-213ENST00000454468 HIST1H4AP62805 103 aaKnown RBP8.2□□□□□ -1.1
SMPD4-213ENST00000454468 ANK3Q12955 4377 aaKnown RBP8.2□□□□□ -1.1
SMPD4-213ENST00000454468 LYPD5Q6UWN5 251 aa8.19□□□□□ -1.1
SMPD4-213ENST00000454468 H0YGX0 51 aa8.19□□□□□ -1.1
SMPD4-213ENST00000454468 ORMDL1Q9P0S3 153 aa8.19□□□□□ -1.1
SMPD4-213ENST00000454468 INAFM2P0DMQ5 153 aa8.18□□□□□ -1.1
SMPD4-213ENST00000454468 KRTAP10-11P60412 298 aa8.18□□□□□ -1.1
SMPD4-213ENST00000454468 RPL28P46779 137 aaKnown RBP8.17□□□□□ -1.1
SMPD4-213ENST00000454468 SDIM1Q6ZPB5 146 aa8.17□□□□□ -1.1
SMPD4-213ENST00000454468 ATOX1O00244 68 aa8.16□□□□□ -1.1
SMPD4-213ENST00000454468 WIPF1O43516 503 aa8.16□□□□□ -1.1
SMPD4-213ENST00000454468 LINC00643Q86TS7 51 aa8.16□□□□□ -1.1
SMPD4-213ENST00000454468 DEFB105AQ8NG35 78 aa8.15□□□□□ -1.1
SMPD4-213ENST00000454468 BRK1Q8WUW1 75 aa8.15□□□□□ -1.1
SMPD4-213ENST00000454468 SEC61GP60059 68 aa8.15□□□□□ -1.1
SMPD4-213ENST00000454468 CXCL5P42830 114 aa8.15□□□□□ -1.11
SMPD4-213ENST00000454468 C9orf129Q5T035 196 aaKnown RBP8.15□□□□□ -1.11
SMPD4-213ENST00000454468 LINC00612Q8N6U2 182 aa8.15□□□□□ -1.11
SMPD4-213ENST00000454468 V9GYY9 64 aa8.15□□□□□ -1.11
SMPD4-213ENST00000454468 FAM19A3Q7Z5A8 133 aa8.14□□□□□ -1.11
SMPD4-213ENST00000454468 ENHOQ6UWT2 76 aa8.14□□□□□ -1.11
SMPD4-213ENST00000454468 DPH3Q96FX2 82 aa8.14□□□□□ -1.11
SMPD4-213ENST00000454468 STAB2Q8WWQ8 2551 aa8.14□□□□□ -1.11
SMPD4-213ENST00000454468 TRBV7-7A0A0K0K1E9 115 aa8.14□□□□□ -1.11
SMPD4-213ENST00000454468 FAM236DA0A1B0GTK5 79 aa8.14□□□□□ -1.11
SMPD4-213ENST00000454468 FAM236CP0DP71 79 aa8.14□□□□□ -1.11
SMPD4-213ENST00000454468 ESRGQ1W209 222 aa8.14□□□□□ -1.11
SMPD4-213ENST00000454468 WFDC9Q8NEX5 89 aa8.13□□□□□ -1.11
SMPD4-213ENST00000454468 TMEM258P61165 79 aa8.12□□□□□ -1.11
SMPD4-213ENST00000454468 A0A087WVE0 104 aa8.11□□□□□ -1.11
SMPD4-213ENST00000454468 KIAA0087Q14695 138 aa8.11□□□□□ -1.11
SMPD4-213ENST00000454468 TRBV10-3A0A0K0K1G6 114 aa8.11□□□□□ -1.11
SMPD4-213ENST00000454468 HAMPP81172 84 aa8.11□□□□□ -1.11
SMPD4-213ENST00000454468 Q6ZQY7 126 aa8.11□□□□□ -1.11
SMPD4-213ENST00000454468 IMUPQ9GZP8 106 aa8.1□□□□□ -1.11
SMPD4-213ENST00000454468 ACYP1P07311 99 aa8.1□□□□□ -1.11
SMPD4-213ENST00000454468 NKAPP1Q8N9T2 125 aa8.1□□□□□ -1.11
SMPD4-213ENST00000454468 Q6ZRU5 148 aa8.09□□□□□ -1.11
SMPD4-213ENST00000454468 UBE2DNLQ8IWF7 75 aa8.09□□□□□ -1.11
SMPD4-213ENST00000454468 C6orf48Q9UBA6 75 aa8.09□□□□□ -1.11
SMPD4-213ENST00000454468 RPS28P62857 69 aaKnown RBP8.09□□□□□ -1.12
SMPD4-213ENST00000454468 C20orf197Q8N268 126 aa8.09□□□□□ -1.12
SMPD4-213ENST00000454468 FAM240AA0A1B0GVK7 77 aa8.08□□□□□ -1.12
SMPD4-213ENST00000454468 PRO0628Q9UI54 55 aa8.08□□□□□ -1.12
SMPD4-213ENST00000454468 PSCAO43653 123 aa8.08□□□□□ -1.12
SMPD4-213ENST00000454468 C1orf195Q5TG92 126 aa8.08□□□□□ -1.12
SMPD4-213ENST00000454468 LINC00336Q6ZUF6 198 aa8.08□□□□□ -1.12
SMPD4-213ENST00000454468 Q8N814 137 aa8.08□□□□□ -1.12
SMPD4-213ENST00000454468 CYSTM1Q9H1C7 97 aa8.08□□□□□ -1.12
SMPD4-213ENST00000454468 RPL37AP8A6NKH3 93 aa8.07□□□□□ -1.12
SMPD4-213ENST00000454468 Q8NDZ9 215 aa8.07□□□□□ -1.12
SMPD4-213ENST00000454468 SMCR5Q8TEV8 140 aa8.07□□□□□ -1.12
SMPD4-213ENST00000454468 DIRC1Q969H9 104 aa8.07□□□□□ -1.12
SMPD4-213ENST00000454468 CRYGAP11844 174 aa8.06□□□□□ -1.12
SMPD4-213ENST00000454468 SERP2Q8N6R1 65 aa8.06□□□□□ -1.12
SMPD4-213ENST00000454468 LINC00846Q9NV44 126 aa8.06□□□□□ -1.12
SMPD4-213ENST00000454468 IGKV2-24A0A0C4DH68 120 aa8.06□□□□□ -1.12
SMPD4-213ENST00000454468 COX17Q14061 63 aa8.06□□□□□ -1.12
SMPD4-213ENST00000454468 TRAV23DV6A0A075B6W5 121 aa8.05□□□□□ -1.12
SMPD4-213ENST00000454468 TMEM256-PLSCR3K7ERE1 68 aa8.05□□□□□ -1.12
SMPD4-213ENST00000454468 RBM3P98179 157 aaKnown RBP8.05□□□□□ -1.12
SMPD4-213ENST00000454468 SYCNQ0VAF6 134 aa8.05□□□□□ -1.12
SMPD4-213ENST00000454468 SCXQ7RTU7 201 aa8.05□□□□□ -1.12
SMPD4-213ENST00000454468 F8WDY8 70 aa8.05□□□□□ -1.12
SMPD4-213ENST00000454468 USP17L23D6RBM5 183 aa8.04□□□□□ -1.12
SMPD4-213ENST00000454468 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.04□□□□□ -1.12
SMPD4-213ENST00000454468 OXTP01178 125 aa8.04□□□□□ -1.12
SMPD4-213ENST00000454468 COX7BP24311 80 aa8.03□□□□□ -1.12
SMPD4-213ENST00000454468 UBL5Q9BZL1 73 aa8.03□□□□□ -1.12
SMPD4-213ENST00000454468 ZNF73O43830 326 aaPredicted RBP8.02□□□□□ -1.12
SMPD4-213ENST00000454468 GHRHP01286 108 aa8.02□□□□□ -1.12
SMPD4-213ENST00000454468 MPLKIPQ8TAP9 179 aa8.01□□□□□ -1.13
SMPD4-213ENST00000454468 JMJD7-PLA2G4BH0Y9G9 81 aa8□□□□□ -1.13
SMPD4-213ENST00000454468 TENM2Q9NT68 2774 aa8□□□□□ -1.13
SMPD4-213ENST00000454468 NDUFC2O95298 119 aa8□□□□□ -1.13
SMPD4-213ENST00000454468 Q5XG85 94 aa8□□□□□ -1.13
SMPD4-213ENST00000454468 PRR34Q9NV39 138 aa8□□□□□ -1.13
SMPD4-213ENST00000454468 TRAV10A0A0B4J240 114 aa7.99□□□□□ -1.13
SMPD4-213ENST00000454468 LINC00575Q6W349 94 aa7.99□□□□□ -1.13
SMPD4-213ENST00000454468 CASC10Q5T4H9 136 aa7.99□□□□□ -1.13
SMPD4-213ENST00000454468 UBE2BP63146 152 aa7.97□□□□□ -1.13
SMPD4-213ENST00000454468 C2orf48Q96LS8 159 aa7.97□□□□□ -1.13
SMPD4-213ENST00000454468 NDUFC2-KCTD14E9PQ53 114 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms