RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 SCO1O75880 301 aa8.07□□□□□ -1.12
LYSMD3-202ENST00000453259 PFN2P35080 140 aa8.07□□□□□ -1.12
LYSMD3-202ENST00000453259 RPS29P62273 56 aaKnown RBP8.07□□□□□ -1.12
LYSMD3-202ENST00000453259 PMVKQ15126 192 aa8.07□□□□□ -1.12
LYSMD3-202ENST00000453259 ERG28Q9UKR5 140 aa8.07□□□□□ -1.12
LYSMD3-202ENST00000453259 LINC01546A6NGU7 62 aa8.06□□□□□ -1.12
LYSMD3-202ENST00000453259 FSIP2Q5CZC0 6907 aa8.04□□□□□ -1.12
LYSMD3-202ENST00000453259 ADCYAP1P18509 176 aa8.04□□□□□ -1.12
LYSMD3-202ENST00000453259 DAND5Q8N907 189 aa8.04□□□□□ -1.12
LYSMD3-202ENST00000453259 Q8NBF4 154 aa8.04□□□□□ -1.12
LYSMD3-202ENST00000453259 IGLC3P0DOY3 106 aa8.03□□□□□ -1.12
LYSMD3-202ENST00000453259 TRAV9-1A0A075B6T8 112 aa8.02□□□□□ -1.13
LYSMD3-202ENST00000453259 GHRHP01286 108 aa8.02□□□□□ -1.13
LYSMD3-202ENST00000453259 RAB14P61106 215 aa8.02□□□□□ -1.13
LYSMD3-202ENST00000453259 hCG_2014768A0A024R1R8 64 aa8.01□□□□□ -1.13
LYSMD3-202ENST00000453259 KRTAP4-1Q9BYQ7 146 aa8.01□□□□□ -1.13
LYSMD3-202ENST00000453259 PRYO14603 147 aa8□□□□□ -1.13
LYSMD3-202ENST00000453259 LINC00483Q53H64 154 aa7.99□□□□□ -1.13
LYSMD3-202ENST00000453259 XP32Q5T750 250 aa7.99□□□□□ -1.13
LYSMD3-202ENST00000453259 SLC25A20O43772 301 aa7.98□□□□□ -1.13
LYSMD3-202ENST00000453259 CFC1BP0CG36 223 aa7.98□□□□□ -1.13
LYSMD3-202ENST00000453259 Q8NDZ9 215 aa7.98□□□□□ -1.13
LYSMD3-202ENST00000453259 ZNF22P17026 224 aaPredicted RBP7.97□□□□□ -1.13
LYSMD3-202ENST00000453259 SPRR1AP35321 89 aa7.97□□□□□ -1.13
LYSMD3-202ENST00000453259 KIAA1644Q3SXP7 199 aa7.97□□□□□ -1.13
LYSMD3-202ENST00000453259 SSBP3-AS1Q7Z2R9 100 aa7.97□□□□□ -1.13
LYSMD3-202ENST00000453259 SMCO4Q9NRQ5 59 aa7.97□□□□□ -1.13
LYSMD3-202ENST00000453259 FA2HQ7L5A8 372 aa7.96□□□□□ -1.14
LYSMD3-202ENST00000453259 Q8N377 158 aa7.96□□□□□ -1.14
LYSMD3-202ENST00000453259 ZNF625Q96I27 306 aaPredicted RBP7.96□□□□□ -1.14
LYSMD3-202ENST00000453259 KCNQ1DNQ9H478 68 aa7.96□□□□□ -1.14
LYSMD3-202ENST00000453259 S100A12P80511 92 aa7.95□□□□□ -1.14
LYSMD3-202ENST00000453259 COX19Q49B96 90 aa7.95□□□□□ -1.14
LYSMD3-202ENST00000453259 ETDCA0A1B0GVM5 59 aa7.93□□□□□ -1.14
LYSMD3-202ENST00000453259 KRTAP4-16G5E9R7 235 aaPredicted RBP7.93□□□□□ -1.14
LYSMD3-202ENST00000453259 LINC00158P58513 81 aa7.93□□□□□ -1.14
LYSMD3-202ENST00000453259 SMCR5Q8TEV8 140 aa7.93□□□□□ -1.14
LYSMD3-202ENST00000453259 NDUFA6P56556 154 aa7.91□□□□□ -1.14
LYSMD3-202ENST00000453259 LINC00587B1AMM8 73 aa7.9□□□□□ -1.14
LYSMD3-202ENST00000453259 ATP6V1G1O75348 118 aa7.9□□□□□ -1.14
LYSMD3-202ENST00000453259 S100PP25815 95 aa7.9□□□□□ -1.14
LYSMD3-202ENST00000453259 MOBPQ13875 183 aa7.9□□□□□ -1.14
LYSMD3-202ENST00000453259 TMEM170BQ5T4T1 132 aa7.9□□□□□ -1.14
LYSMD3-202ENST00000453259 LOC100996750A0A140TA64 210 aa7.89□□□□□ -1.15
LYSMD3-202ENST00000453259 GAGE2AQ6NT46 116 aa7.89□□□□□ -1.15
LYSMD3-202ENST00000453259 BOD1L2Q8IYS8 172 aa7.89□□□□□ -1.15
LYSMD3-202ENST00000453259 KRTAP4-6Q9BYQ5 205 aa7.89□□□□□ -1.15
LYSMD3-202ENST00000453259 C11orf86A6NJI1 115 aa7.88□□□□□ -1.15
LYSMD3-202ENST00000453259 HBDP02042 147 aa7.88□□□□□ -1.15
LYSMD3-202ENST00000453259 MT1HP80294 61 aa7.88□□□□□ -1.15
LYSMD3-202ENST00000453259 A0A096LNJ9 63 aa7.87□□□□□ -1.15
LYSMD3-202ENST00000453259 IGLV9-49A0A0B4J1Y8 123 aa7.87□□□□□ -1.15
LYSMD3-202ENST00000453259 HERV-K104P63124 156 aa7.87□□□□□ -1.15
LYSMD3-202ENST00000453259 KRTAP19-2Q3LHN2 52 aa7.87□□□□□ -1.15
LYSMD3-202ENST00000453259 B5MCH6 92 aa7.86□□□□□ -1.15
LYSMD3-202ENST00000453259 BAGE3Q86Y29 109 aa7.86□□□□□ -1.15
LYSMD3-202ENST00000453259 TRBV10-3A0A0K0K1G6 114 aa7.85□□□□□ -1.15
LYSMD3-202ENST00000453259 NCR3O14931 201 aa7.85□□□□□ -1.15
LYSMD3-202ENST00000453259 LINC00614P0C842 121 aa7.84□□□□□ -1.15
LYSMD3-202ENST00000453259 FABP9Q0Z7S8 132 aa7.84□□□□□ -1.15
LYSMD3-202ENST00000453259 Q6ZRX8 168 aa7.84□□□□□ -1.15
LYSMD3-202ENST00000453259 MIR7-3HGQ8N6C7 128 aa7.84□□□□□ -1.15
LYSMD3-202ENST00000453259 MAP1LC3CQ9BXW4 147 aa7.84□□□□□ -1.15
LYSMD3-202ENST00000453259 SEC11CQ9BY50 192 aa7.84□□□□□ -1.15
LYSMD3-202ENST00000453259 TRBV10-2A0A0K0K1G8 114 aa7.83□□□□□ -1.16
LYSMD3-202ENST00000453259 A0A0U1RRA0 63 aa7.83□□□□□ -1.16
LYSMD3-202ENST00000453259 TMEM223A0PJW6 202 aa7.83□□□□□ -1.16
LYSMD3-202ENST00000453259 C5orf52A6NGY3 159 aa7.83□□□□□ -1.16
LYSMD3-202ENST00000453259 SMIM13P0DJ93 91 aa7.83□□□□□ -1.16
LYSMD3-202ENST00000453259 MEIG1Q5JSS6 88 aa7.83□□□□□ -1.16
LYSMD3-202ENST00000453259 JOSD1Q15040 202 aaPredicted RBP7.82□□□□□ -1.16
LYSMD3-202ENST00000453259 UQCC3Q6UW78 93 aa7.82□□□□□ -1.16
LYSMD3-202ENST00000453259 LIMD2Q9BT23 127 aa7.82□□□□□ -1.16
LYSMD3-202ENST00000453259 CHTOPQ9Y3Y2 248 aaKnown RBP7.82□□□□□ -1.16
LYSMD3-202ENST00000453259 LOC107984156A0A0G2JMH3 177 aa7.81□□□□□ -1.16
LYSMD3-202ENST00000453259 ARL17AQ8IVW1 177 aa7.81□□□□□ -1.16
LYSMD3-202ENST00000453259 IGLV8-61A0A075B6I0 122 aa7.8□□□□□ -1.16
LYSMD3-202ENST00000453259 TRAV12-1A0A0B4J245 112 aa7.8□□□□□ -1.16
LYSMD3-202ENST00000453259 ERC2-IT1O76042 136 aa7.8□□□□□ -1.16
LYSMD3-202ENST00000453259 C18orf32Q8TCD1 76 aa7.8□□□□□ -1.16
LYSMD3-202ENST00000453259 Q9BRP9 147 aa7.8□□□□□ -1.16
LYSMD3-202ENST00000453259 DDTP30046 118 aa7.79□□□□□ -1.16
LYSMD3-202ENST00000453259 KRTAP10-6P60371 365 aaPredicted RBP7.79□□□□□ -1.16
LYSMD3-202ENST00000453259 PCOTHQ58A44 107 aa7.79□□□□□ -1.16
LYSMD3-202ENST00000453259 C9orf153Q5TBE3 101 aa7.79□□□□□ -1.16
LYSMD3-202ENST00000453259 URB1-AS1Q96HZ7 61 aa7.79□□□□□ -1.16
LYSMD3-202ENST00000453259 MYMXA0A1B0GTQ4 84 aa7.78□□□□□ -1.16
LYSMD3-202ENST00000453259 TMEM218A2RU14 115 aa7.78□□□□□ -1.16
LYSMD3-202ENST00000453259 SPANXB1Q9NS25 103 aaPredicted RBP7.78□□□□□ -1.16
LYSMD3-202ENST00000453259 CLLU1Q5K131 121 aa7.77□□□□□ -1.17
LYSMD3-202ENST00000453259 IFITM2Q01629 132 aa7.76□□□□□ -1.17
LYSMD3-202ENST00000453259 PMCHL1Q16048 86 aa7.76□□□□□ -1.17
LYSMD3-202ENST00000453259 SLC25A34Q6PIV7 304 aa7.76□□□□□ -1.17
LYSMD3-202ENST00000453259 CBY1Q9Y3M2 126 aa7.76□□□□□ -1.17
LYSMD3-202ENST00000453259 NDUFC2O95298 119 aa7.75□□□□□ -1.17
LYSMD3-202ENST00000453259 IGLV6-57P01721 117 aa7.74□□□□□ -1.17
LYSMD3-202ENST00000453259 RHEBQ15382 184 aa7.74□□□□□ -1.17
LYSMD3-202ENST00000453259 MIEN1Q9BRT3 115 aa7.74□□□□□ -1.17
LYSMD3-202ENST00000453259 S100A7L2Q5SY68 101 aa7.73□□□□□ -1.17
LYSMD3-202ENST00000453259 COMMD7Q86VX2 200 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms