RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 ZNF345Q14585 488 aa2.36□□□□□ -2.03
LINC00393-202ENST00000452852 BIN3Q9NQY0 253 aa2.36□□□□□ -2.03
LINC00393-202ENST00000452852 GNG13Q9P2W3 67 aa2.36□□□□□ -2.03
LINC00393-202ENST00000452852 R4GN34 69 aa2.36□□□□□ -2.03
LINC00393-202ENST00000452852 FLG2Q5D862 2391 aaPredicted RBP2.35□□□□□ -2.03
LINC00393-202ENST00000452852 IGHV3-64A0A075B6Q5 118 aa2.35□□□□□ -2.03
LINC00393-202ENST00000452852 COX7A2LO14548 114 aa2.35□□□□□ -2.03
LINC00393-202ENST00000452852 APOMO95445 188 aa2.35□□□□□ -2.03
LINC00393-202ENST00000452852 IFNA1P01562 189 aa2.35□□□□□ -2.03
LINC00393-202ENST00000452852 GZMBP10144 247 aa2.35□□□□□ -2.03
LINC00393-202ENST00000452852 ZNF22P17026 224 aaPredicted RBP2.35□□□□□ -2.03
LINC00393-202ENST00000452852 RPL35P42766 123 aaKnown RBP2.35□□□□□ -2.03
LINC00393-202ENST00000452852 GNG4P50150 75 aa2.35□□□□□ -2.03
LINC00393-202ENST00000452852 RAB5CP51148 216 aa2.35□□□□□ -2.03
LINC00393-202ENST00000452852 TSPEAR-AS2P59090 65 aa2.35□□□□□ -2.03
LINC00393-202ENST00000452852 IQCJQ1A5X6 159 aa2.35□□□□□ -2.03
LINC00393-202ENST00000452852 EIF5AL1Q6IS14 154 aaKnown RBP2.35□□□□□ -2.03
LINC00393-202ENST00000452852 RASL11AQ6T310 242 aa2.35□□□□□ -2.03
LINC00393-202ENST00000452852 SDIM1Q6ZPB5 146 aa2.35□□□□□ -2.03
LINC00393-202ENST00000452852 SMIM15Q7Z3B0 74 aa2.35□□□□□ -2.03
LINC00393-202ENST00000452852 DAND5Q8N907 189 aa2.35□□□□□ -2.03
LINC00393-202ENST00000452852 C9orf163Q8N9P6 203 aa2.35□□□□□ -2.03
LINC00393-202ENST00000452852 OR2D3Q8NGH3 330 aa2.35□□□□□ -2.03
LINC00393-202ENST00000452852 MBD3L1Q8WWY6 194 aa2.35□□□□□ -2.03
LINC00393-202ENST00000452852 IGKV3OR2-268A0A0C4DH90 116 aa2.34□□□□□ -2.03
LINC00393-202ENST00000452852 C19orf71A6NCJ1 209 aa2.34□□□□□ -2.03
LINC00393-202ENST00000452852 HMSDA8MTL9 139 aa2.34□□□□□ -2.03
LINC00393-202ENST00000452852 G3V3Q6 166 aa2.34□□□□□ -2.03
LINC00393-202ENST00000452852 M0QY20 66 aa2.34□□□□□ -2.03
LINC00393-202ENST00000452852 PDE6DO43924 150 aa2.34□□□□□ -2.03
LINC00393-202ENST00000452852 FGF6P10767 208 aa2.34□□□□□ -2.03
LINC00393-202ENST00000452852 CNBPP62633 177 aaKnown RBP2.34□□□□□ -2.03
LINC00393-202ENST00000452852 FABP9Q0Z7S8 132 aa2.34□□□□□ -2.03
LINC00393-202ENST00000452852 FAM229BQ4G0N7 80 aa2.34□□□□□ -2.03
LINC00393-202ENST00000452852 AMMECR1LQ6DCA0 310 aa2.34□□□□□ -2.03
LINC00393-202ENST00000452852 IGFL1Q6UW32 110 aa2.34□□□□□ -2.03
LINC00393-202ENST00000452852 NIT2Q9NQR4 276 aa2.34□□□□□ -2.03
LINC00393-202ENST00000452852 A0A1B0GU33 70 aa2.33□□□□□ -2.04
LINC00393-202ENST00000452852 NCR2O95944 276 aa2.33□□□□□ -2.04
LINC00393-202ENST00000452852 IGLC6P0CF74 106 aa2.33□□□□□ -2.04
LINC00393-202ENST00000452852 HRES1P13985 223 aa2.33□□□□□ -2.04
LINC00393-202ENST00000452852 KRTAP10-4P60372 401 aaPredicted RBP2.33□□□□□ -2.04
LINC00393-202ENST00000452852 CCL20P78556 96 aa2.33□□□□□ -2.04
LINC00393-202ENST00000452852 MEF2BQ02080 365 aaPredicted RBP2.33□□□□□ -2.04
LINC00393-202ENST00000452852 LYZL1Q6UWQ5 148 aa2.33□□□□□ -2.04
LINC00393-202ENST00000452852 BORCS7Q96B45 105 aa2.33□□□□□ -2.04
LINC00393-202ENST00000452852 BTF3L4Q96K17 158 aa2.33□□□□□ -2.04
LINC00393-202ENST00000452852 MED9Q9NWA0 146 aa2.33□□□□□ -2.04
LINC00393-202ENST00000452852 LINC00474Q9P2X8 69 aa2.33□□□□□ -2.04
LINC00393-202ENST00000452852 TNXBP22105 4242 aa2.32□□□□□ -2.04
LINC00393-202ENST00000452852 TRAV1-1A0A0B4J248 108 aa2.32□□□□□ -2.04
LINC00393-202ENST00000452852 IGKV2-24A0A0C4DH68 120 aa2.32□□□□□ -2.04
LINC00393-202ENST00000452852 LST1O00453 97 aa2.32□□□□□ -2.04
LINC00393-202ENST00000452852 ZNF25P17030 456 aaPredicted RBP2.32□□□□□ -2.04
LINC00393-202ENST00000452852 COX6A2Q02221 97 aa2.32□□□□□ -2.04
LINC00393-202ENST00000452852 KRTAP26-1Q6PEX3 210 aa2.32□□□□□ -2.04
LINC00393-202ENST00000452852 TEX261Q6UWH6 196 aa2.32□□□□□ -2.04
LINC00393-202ENST00000452852 C9orf62Q8N4C0 152 aa2.32□□□□□ -2.04
LINC00393-202ENST00000452852 SPACA4Q8TDM5 124 aa2.32□□□□□ -2.04
LINC00393-202ENST00000452852 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.31□□□□□ -2.04
LINC00393-202ENST00000452852 TRAV26-2A0A0B4J265 109 aa2.31□□□□□ -2.04
LINC00393-202ENST00000452852 IGHV1-58A0A0C4DH39 117 aa2.31□□□□□ -2.04
LINC00393-202ENST00000452852 IGKV2-29A2NJV5 120 aaPredicted RBP2.31□□□□□ -2.04
LINC00393-202ENST00000452852 A8MUN3 132 aa2.31□□□□□ -2.04
LINC00393-202ENST00000452852 I3L3M4 83 aa2.31□□□□□ -2.04
LINC00393-202ENST00000452852 BCL2P10415 239 aa2.31□□□□□ -2.04
LINC00393-202ENST00000452852 XCL1P47992 114 aa2.31□□□□□ -2.04
LINC00393-202ENST00000452852 CIRBPQ14011 172 aaKnown RBP2.31□□□□□ -2.04
LINC00393-202ENST00000452852 SS18Q15532 418 aa2.31□□□□□ -2.04
LINC00393-202ENST00000452852 PP632Q6XCG6 107 aa2.31□□□□□ -2.04
LINC00393-202ENST00000452852 OR5A1Q8NGJ0 315 aa2.31□□□□□ -2.04
LINC00393-202ENST00000452852 RPL39LQ96EH5 51 aaKnown RBP2.31□□□□□ -2.04
LINC00393-202ENST00000452852 CARD19Q96LW7 228 aa2.31□□□□□ -2.04
LINC00393-202ENST00000452852 RNASE7Q9H1E1 156 aaKnown RBP2.31□□□□□ -2.04
LINC00393-202ENST00000452852 ST20Q9HBF5 79 aa2.31□□□□□ -2.04
LINC00393-202ENST00000452852 PLAC8Q9NZF1 115 aa2.31□□□□□ -2.04
LINC00393-202ENST00000452852 HMCN2Q8NDA2 5059 aa2.3□□□□□ -2.04
LINC00393-202ENST00000452852 GVQW2A0A096LPI5 108 aaPredicted RBP2.3□□□□□ -2.04
LINC00393-202ENST00000452852 FAM236DA0A1B0GTK5 79 aa2.3□□□□□ -2.04
LINC00393-202ENST00000452852 SDHAF1A6NFY7 115 aa2.3□□□□□ -2.04
LINC00393-202ENST00000452852 FAM236CP0DP71 79 aa2.3□□□□□ -2.04
LINC00393-202ENST00000452852 G0S2P27469 103 aa2.3□□□□□ -2.04
LINC00393-202ENST00000452852 FCER1GP30273 86 aa2.3□□□□□ -2.04
LINC00393-202ENST00000452852 SIGMAR1Q99720 223 aa2.3□□□□□ -2.04
LINC00393-202ENST00000452852 CNFNQ9BYD5 112 aa2.3□□□□□ -2.04
LINC00393-202ENST00000452852 TRBV20OR9-2A0A075B6H5 130 aa2.29□□□□□ -2.04
LINC00393-202ENST00000452852 A0A096LNI7 61 aa2.29□□□□□ -2.04
LINC00393-202ENST00000452852 LINC00959A0A1B0GUT2 108 aa2.29□□□□□ -2.04
LINC00393-202ENST00000452852 C7orf77A4D0Y5 90 aa2.29□□□□□ -2.04
LINC00393-202ENST00000452852 CCL25O15444 150 aa2.29□□□□□ -2.04
LINC00393-202ENST00000452852 PPP1R17O96001 155 aa2.29□□□□□ -2.04
LINC00393-202ENST00000452852 MT1HL1P0DM35 61 aa2.29□□□□□ -2.04
LINC00393-202ENST00000452852 SPINK6Q6UWN8 80 aa2.29□□□□□ -2.04
LINC00393-202ENST00000452852 TCTE3Q8IZS6 198 aa2.29□□□□□ -2.04
LINC00393-202ENST00000452852 ZNF664Q8N3J9 261 aa2.29□□□□□ -2.04
LINC00393-202ENST00000452852 OR10D4PQ8NGN7 298 aa2.29□□□□□ -2.04
LINC00393-202ENST00000452852 LINC01600Q96MT4 127 aa2.29□□□□□ -2.04
LINC00393-202ENST00000452852 TTTY13Q9BZ97 58 aa2.29□□□□□ -2.04
LINC00393-202ENST00000452852 SMDT1Q9H4I9 107 aa2.29□□□□□ -2.04
LINC00393-202ENST00000452852 TMEM242Q9NWH2 141 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms