RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 RAB14P61106 215 aa6.31□□□□□ -1.4
USP1-204ENST00000452143 PRLHP81277 87 aa6.31□□□□□ -1.4
USP1-204ENST00000452143 CDIP1Q9H305 208 aa6.31□□□□□ -1.4
USP1-204ENST00000452143 IGLV5-39A0A0G2JS06 123 aa6.3□□□□□ -1.4
USP1-204ENST00000452143 RPL24P83731 157 aaKnown RBP6.3□□□□□ -1.4
USP1-204ENST00000452143 COX17Q14061 63 aa6.3□□□□□ -1.4
USP1-204ENST00000452143 GNB1LQ9BYB4 327 aa6.3□□□□□ -1.4
USP1-204ENST00000452143 TMEM126AQ9H061 195 aa6.3□□□□□ -1.4
USP1-204ENST00000452143 H3BS24 57 aa6.29□□□□□ -1.4
USP1-204ENST00000452143 IGLC3P0DOY3 106 aa6.29□□□□□ -1.4
USP1-204ENST00000452143 VPREB1P12018 145 aa6.29□□□□□ -1.4
USP1-204ENST00000452143 PFN2P35080 140 aa6.29□□□□□ -1.4
USP1-204ENST00000452143 SFTA2Q6UW10 78 aa6.29□□□□□ -1.4
USP1-204ENST00000452143 FAM19A1Q7Z5A9 133 aa6.29□□□□□ -1.4
USP1-204ENST00000452143 ERG28Q9UKR5 140 aa6.29□□□□□ -1.4
USP1-204ENST00000452143 IGLV7-46A0A075B6I9 117 aa6.28□□□□□ -1.4
USP1-204ENST00000452143 SCO1O75880 301 aa6.28□□□□□ -1.4
USP1-204ENST00000452143 COX19Q49B96 90 aa6.28□□□□□ -1.4
USP1-204ENST00000452143 FA2HQ7L5A8 372 aa6.28□□□□□ -1.4
USP1-204ENST00000452143 SND1-IT1Q9HBX3 110 aa6.28□□□□□ -1.4
USP1-204ENST00000452143 SMCO4Q9NRQ5 59 aa6.28□□□□□ -1.4
USP1-204ENST00000452143 TMEM238C9JI98 176 aa6.27□□□□□ -1.41
USP1-204ENST00000452143 M0R378 163 aa6.27□□□□□ -1.41
USP1-204ENST00000452143 S100PP25815 95 aa6.27□□□□□ -1.41
USP1-204ENST00000452143 PLEKHB2Q96CS7 222 aa6.27□□□□□ -1.41
USP1-204ENST00000452143 ZNF22P17026 224 aaPredicted RBP6.26□□□□□ -1.41
USP1-204ENST00000452143 CLLU1Q5K131 121 aa6.26□□□□□ -1.41
USP1-204ENST00000452143 SPAG11AQ6PDA7 123 aa6.26□□□□□ -1.41
USP1-204ENST00000452143 UQCC3Q6UW78 93 aa6.26□□□□□ -1.41
USP1-204ENST00000452143 CBLN2Q8IUK8 224 aa6.25□□□□□ -1.41
USP1-204ENST00000452143 PPDPFQ9H3Y8 114 aa6.25□□□□□ -1.41
USP1-204ENST00000452143 TMEM218A2RU14 115 aa6.24□□□□□ -1.41
USP1-204ENST00000452143 FP248Q71RG6 208 aaPredicted RBP6.24□□□□□ -1.41
USP1-204ENST00000452143 C3orf22Q8N5N4 141 aa6.24□□□□□ -1.41
USP1-204ENST00000452143 HIGD2AQ9BW72 106 aa6.24□□□□□ -1.41
USP1-204ENST00000452143 A0A096LNJ9 63 aa6.23□□□□□ -1.41
USP1-204ENST00000452143 NDUFA6P56556 154 aa6.23□□□□□ -1.41
USP1-204ENST00000452143 Q8NDZ9 215 aa6.23□□□□□ -1.41
USP1-204ENST00000452143 ZNF706Q9Y5V0 76 aaPredicted RBP6.23□□□□□ -1.41
USP1-204ENST00000452143 HBDP02042 147 aa6.22□□□□□ -1.41
USP1-204ENST00000452143 FABP9Q0Z7S8 132 aa6.22□□□□□ -1.41
USP1-204ENST00000452143 ZNF625Q96I27 306 aaPredicted RBP6.22□□□□□ -1.41
USP1-204ENST00000452143 SPRR4Q96PI1 79 aa6.22□□□□□ -1.41
USP1-204ENST00000452143 SEC11CQ9BY50 192 aa6.22□□□□□ -1.41
USP1-204ENST00000452143 C11orf86A6NJI1 115 aa6.2□□□□□ -1.42
USP1-204ENST00000452143 TMEM170BQ5T4T1 132 aa6.2□□□□□ -1.42
USP1-204ENST00000452143 PRYO14603 147 aa6.19□□□□□ -1.42
USP1-204ENST00000452143 LINC00614P0C842 121 aa6.19□□□□□ -1.42
USP1-204ENST00000452143 LINC00158P58513 81 aa6.19□□□□□ -1.42
USP1-204ENST00000452143 RHEBQ15382 184 aa6.19□□□□□ -1.42
USP1-204ENST00000452143 C18orf32Q8TCD1 76 aa6.19□□□□□ -1.42
USP1-204ENST00000452143 URB1-AS1Q96HZ7 61 aa6.19□□□□□ -1.42
USP1-204ENST00000452143 KRTAP13-3Q3SY46 172 aa6.18□□□□□ -1.42
USP1-204ENST00000452143 BAGE3Q86Y29 109 aa6.18□□□□□ -1.42
USP1-204ENST00000452143 LINC00337Q8N6G1 96 aa6.18□□□□□ -1.42
USP1-204ENST00000452143 SPINK1P00995 79 aa6.17□□□□□ -1.42
USP1-204ENST00000452143 SPRR1AP35321 89 aa6.17□□□□□ -1.42
USP1-204ENST00000452143 PMCHL1Q16048 86 aa6.17□□□□□ -1.42
USP1-204ENST00000452143 ASB16-AS1Q495Z4 193 aa6.17□□□□□ -1.42
USP1-204ENST00000452143 Q8NBF4 154 aa6.17□□□□□ -1.42
USP1-204ENST00000452143 ANKRD39Q53RE8 183 aa6.16□□□□□ -1.42
USP1-204ENST00000452143 KCNQ1DNQ9H478 68 aa6.16□□□□□ -1.42
USP1-204ENST00000452143 CHTOPQ9Y3Y2 248 aaKnown RBP6.16□□□□□ -1.42
USP1-204ENST00000452143 TRAPPC1Q9Y5R8 145 aa6.16□□□□□ -1.42
USP1-204ENST00000452143 TMEM223A0PJW6 202 aa6.15□□□□□ -1.42
USP1-204ENST00000452143 KRTAP4-16G5E9R7 235 aaPredicted RBP6.15□□□□□ -1.42
USP1-204ENST00000452143 ATP6V1G1O75348 118 aa6.15□□□□□ -1.42
USP1-204ENST00000452143 RPS29P62273 56 aaKnown RBP6.15□□□□□ -1.42
USP1-204ENST00000452143 LINC00483Q53H64 154 aa6.15□□□□□ -1.42
USP1-204ENST00000452143 C10orf91Q5T1B1 145 aa6.15□□□□□ -1.42
USP1-204ENST00000452143 BOD1L2Q8IYS8 172 aa6.15□□□□□ -1.42
USP1-204ENST00000452143 FAM19A2Q8N3H0 131 aa6.15□□□□□ -1.42
USP1-204ENST00000452143 DAND5Q8N907 189 aa6.15□□□□□ -1.42
USP1-204ENST00000452143 RPS10P5Q9NQ39 176 aa6.15□□□□□ -1.42
USP1-204ENST00000452143 NDUFA12Q9UI09 145 aa6.15□□□□□ -1.42
USP1-204ENST00000452143 TRAV12-1A0A0B4J245 112 aa6.14□□□□□ -1.43
USP1-204ENST00000452143 A0A0U1RRA0 63 aa6.14□□□□□ -1.43
USP1-204ENST00000452143 ETDCA0A1B0GVM5 59 aa6.14□□□□□ -1.43
USP1-204ENST00000452143 LINC00587B1AMM8 73 aa6.14□□□□□ -1.43
USP1-204ENST00000452143 HERV-K104P63124 156 aa6.14□□□□□ -1.43
USP1-204ENST00000452143 S100A12P80511 92 aa6.14□□□□□ -1.43
USP1-204ENST00000452143 MEIG1Q5JSS6 88 aa6.14□□□□□ -1.43
USP1-204ENST00000452143 NCR3O14931 201 aa6.13□□□□□ -1.43
USP1-204ENST00000452143 SMIM13P0DJ93 91 aa6.13□□□□□ -1.43
USP1-204ENST00000452143 SEC61BP60468 96 aaKnown RBP6.13□□□□□ -1.43
USP1-204ENST00000452143 MIR7-3HGQ8N6C7 128 aa6.13□□□□□ -1.43
USP1-204ENST00000452143 SMCR5Q8TEV8 140 aa6.13□□□□□ -1.43
USP1-204ENST00000452143 LINC01547P58512 204 aaPredicted RBP6.12□□□□□ -1.43
USP1-204ENST00000452143 COMMD7Q86VX2 200 aa6.12□□□□□ -1.43
USP1-204ENST00000452143 TRBV10-3A0A0K0K1G6 114 aa6.11□□□□□ -1.43
USP1-204ENST00000452143 IFITM2Q01629 132 aa6.11□□□□□ -1.43
USP1-204ENST00000452143 IFI27L1Q96BM0 104 aa6.11□□□□□ -1.43
USP1-204ENST00000452143 CHCHD1Q96BP2 118 aaKnown RBP6.11□□□□□ -1.43
USP1-204ENST00000452143 MAP1LC3CQ9BXW4 147 aa6.11□□□□□ -1.43
USP1-204ENST00000452143 FSIP2Q5CZC0 6907 aa6.11□□□□□ -1.43
USP1-204ENST00000452143 MOBPQ13875 183 aa6.1□□□□□ -1.43
USP1-204ENST00000452143 GAGE2AQ6NT46 116 aa6.1□□□□□ -1.43
USP1-204ENST00000452143 SSBP3-AS1Q7Z2R9 100 aa6.1□□□□□ -1.43
USP1-204ENST00000452143 Q8N377 158 aa6.1□□□□□ -1.43
USP1-204ENST00000452143 TRBV10-2A0A0K0K1G8 114 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms