RNA–Protein interactions for RNA: ENST00000449771.6

RAPGEF3-205, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 6,061 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-205ENST00000449771 SPAG11AQ6PDA7 123 aa9.63□□□□□ -0.87
RAPGEF3-205ENST00000449771 CHTF8P0CG12 524 aa9.62□□□□□ -0.87
RAPGEF3-205ENST00000449771 LINC00336Q6ZUF6 198 aa9.61□□□□□ -0.87
RAPGEF3-205ENST00000449771 SMIM29Q86T20 159 aa9.61□□□□□ -0.87
RAPGEF3-205ENST00000449771 TET2Q6N021 2002 aaPredicted RBP9.61□□□□□ -0.87
RAPGEF3-205ENST00000449771 COL4A2P08572 1712 aa9.61□□□□□ -0.87
RAPGEF3-205ENST00000449771 SPATA3Q8NHX4 192 aa9.61□□□□□ -0.87
RAPGEF3-205ENST00000449771 TYMSOSQ8TAI1 123 aa9.6□□□□□ -0.87
RAPGEF3-205ENST00000449771 Q6ZRP5 223 aa9.59□□□□□ -0.87
RAPGEF3-205ENST00000449771 LINC00588Q9Y4M8 146 aa9.58□□□□□ -0.88
RAPGEF3-205ENST00000449771 PIEZO2Q9H5I5 2752 aa9.57□□□□□ -0.88
RAPGEF3-205ENST00000449771 WWC2-AS2Q96NR7 200 aa9.57□□□□□ -0.88
RAPGEF3-205ENST00000449771 Q8NBF4 154 aa9.57□□□□□ -0.88
RAPGEF3-205ENST00000449771 EPM2AB3EWF7 344 aa9.56□□□□□ -0.88
RAPGEF3-205ENST00000449771 ELOF1P60002 83 aaKnown RBP9.56□□□□□ -0.88
RAPGEF3-205ENST00000449771 C8orf87E5RJ46 101 aa9.55□□□□□ -0.88
RAPGEF3-205ENST00000449771 Q8NAQ8 132 aa9.55□□□□□ -0.88
RAPGEF3-205ENST00000449771 TP53AIP1Q9HCN2 124 aa9.55□□□□□ -0.88
RAPGEF3-205ENST00000449771 LINC00313P59037 77 aa9.53□□□□□ -0.88
RAPGEF3-205ENST00000449771 J3QL48 77 aa9.53□□□□□ -0.88
RAPGEF3-205ENST00000449771 FAM218AQ96MZ4 157 aa9.53□□□□□ -0.88
RAPGEF3-205ENST00000449771 WIPF1O43516 503 aa9.53□□□□□ -0.88
RAPGEF3-205ENST00000449771 Q6ZRX8 168 aa9.53□□□□□ -0.88
RAPGEF3-205ENST00000449771 PLA2G1BP04054 148 aaKnown RBP9.53□□□□□ -0.88
RAPGEF3-205ENST00000449771 LINC00476Q8WZB0 136 aa9.53□□□□□ -0.88
RAPGEF3-205ENST00000449771 TM2D3Q9BRN9 247 aa9.52□□□□□ -0.88
RAPGEF3-205ENST00000449771 MYO18BQ8IUG5 2567 aa9.52□□□□□ -0.88
RAPGEF3-205ENST00000449771 IGLV5-45A0A087WSX0 123 aa9.51□□□□□ -0.89
RAPGEF3-205ENST00000449771 A0A1B0GU69 56 aa9.51□□□□□ -0.89
RAPGEF3-205ENST00000449771 ACYP2P14621 99 aa9.51□□□□□ -0.89
RAPGEF3-205ENST00000449771 ST20-AS1Q8NBB2 130 aa9.5□□□□□ -0.89
RAPGEF3-205ENST00000449771 RPL37AP61513 92 aaKnown RBP9.5□□□□□ -0.89
RAPGEF3-205ENST00000449771 PIEZO1Q92508 2521 aa9.49□□□□□ -0.89
RAPGEF3-205ENST00000449771 PTPRBP23467 1997 aa9.49□□□□□ -0.89
RAPGEF3-205ENST00000449771 GVQW2A0A096LPI5 108 aaPredicted RBP9.49□□□□□ -0.89
RAPGEF3-205ENST00000449771 Q96NJ1 140 aa9.48□□□□□ -0.89
RAPGEF3-205ENST00000449771 A8MUN3 132 aa9.48□□□□□ -0.89
RAPGEF3-205ENST00000449771 C2CD3Q4AC94 2353 aa9.48□□□□□ -0.89
RAPGEF3-205ENST00000449771 COL27A1Q8IZC6 1860 aaPredicted RBP9.48□□□□□ -0.89
RAPGEF3-205ENST00000449771 KTN1-AS1Q86SY8 53 aa9.47□□□□□ -0.89
RAPGEF3-205ENST00000449771 ATP11AUNQ6ZP68 121 aa9.46□□□□□ -0.89
RAPGEF3-205ENST00000449771 Q6ZQT0 140 aa9.45□□□□□ -0.9
RAPGEF3-205ENST00000449771 A0A1B0GW54 56 aa9.44□□□□□ -0.9
RAPGEF3-205ENST00000449771 DNAH10OSP0CZ25 163 aa9.44□□□□□ -0.9
RAPGEF3-205ENST00000449771 FAM168BA1KXE4 195 aa9.43□□□□□ -0.9
RAPGEF3-205ENST00000449771 CYP4F30PQ9H0H9 118 aa9.42□□□□□ -0.9
RAPGEF3-205ENST00000449771 LOC110117498A0A087WWA1 95 aa9.42□□□□□ -0.9
RAPGEF3-205ENST00000449771 KRTAP10-11P60412 298 aa9.4□□□□□ -0.9
RAPGEF3-205ENST00000449771 SPINT4Q6UDR6 99 aa9.4□□□□□ -0.9
RAPGEF3-205ENST00000449771 LCA10Q71F78 164 aa9.4□□□□□ -0.9
RAPGEF3-205ENST00000449771 ERC2-IT1O76042 136 aa9.39□□□□□ -0.91
RAPGEF3-205ENST00000449771 DOPEY1Q5JWR5 2465 aa9.38□□□□□ -0.91
RAPGEF3-205ENST00000449771 LRRK2Q5S007 2527 aa9.38□□□□□ -0.91
RAPGEF3-205ENST00000449771 K7EIL1 84 aa9.38□□□□□ -0.91
RAPGEF3-205ENST00000449771 TRAV22A0A0B4J277 110 aa9.37□□□□□ -0.91
RAPGEF3-205ENST00000449771 H3BPC8 53 aa9.37□□□□□ -0.91
RAPGEF3-205ENST00000449771 KLKP1Q107X0 134 aa9.36□□□□□ -0.91
RAPGEF3-205ENST00000449771 COX6B2Q6YFQ2 88 aa9.36□□□□□ -0.91
RAPGEF3-205ENST00000449771 PRR15Q8IV56 129 aa9.36□□□□□ -0.91
RAPGEF3-205ENST00000449771 JMJD1CQ15652 2540 aa9.36□□□□□ -0.91
RAPGEF3-205ENST00000449771 H7BZZ5 65 aa9.35□□□□□ -0.91
RAPGEF3-205ENST00000449771 IGLV8-61A0A075B6I0 122 aa9.35□□□□□ -0.91
RAPGEF3-205ENST00000449771 IGLV1-50A0A075B6I6 118 aa9.33□□□□□ -0.92
RAPGEF3-205ENST00000449771 TRBV7-4A0A0J9YYF1 115 aa9.32□□□□□ -0.92
RAPGEF3-205ENST00000449771 IGLV6-57P01721 117 aa9.32□□□□□ -0.92
RAPGEF3-205ENST00000449771 TLN1Q9Y490 2541 aaKnown RBP9.32□□□□□ -0.92
RAPGEF3-205ENST00000449771 CSNK1G2-AS1Q8NCQ2 148 aa9.32□□□□□ -0.92
RAPGEF3-205ENST00000449771 A8MWP4 228 aa9.32□□□□□ -0.92
RAPGEF3-205ENST00000449771 MYO9AB2RTY4 2548 aa9.31□□□□□ -0.92
RAPGEF3-205ENST00000449771 KLK9Q2XQG4 91 aa9.31□□□□□ -0.92
RAPGEF3-205ENST00000449771 LITAFQ99732 161 aa9.31□□□□□ -0.92
RAPGEF3-205ENST00000449771 COA5Q86WW8 74 aa9.3□□□□□ -0.92
RAPGEF3-205ENST00000449771 ABCA12Q86UK0 2595 aa9.3□□□□□ -0.92
RAPGEF3-205ENST00000449771 LOC101927531A0A1B0GV80 90 aa9.3□□□□□ -0.92
RAPGEF3-205ENST00000449771 LINC00304Q8N9R0 145 aa9.29□□□□□ -0.92
RAPGEF3-205ENST00000449771 MRPL34Q9BQ48 92 aaKnown RBP9.29□□□□□ -0.92
RAPGEF3-205ENST00000449771 C19orf73Q9NVV2 129 aa9.29□□□□□ -0.92
RAPGEF3-205ENST00000449771 MUC4Q99102 2169 aa9.28□□□□□ -0.92
RAPGEF3-205ENST00000449771 KRTAP10-3P60369 221 aa9.28□□□□□ -0.92
RAPGEF3-205ENST00000449771 DSCR10P59022 87 aa9.27□□□□□ -0.92
RAPGEF3-205ENST00000449771 C9orf92A6NGG3 77 aa9.27□□□□□ -0.93
RAPGEF3-205ENST00000449771 SMR3BP02814 79 aaPredicted RBP9.27□□□□□ -0.93
RAPGEF3-205ENST00000449771 K7EQZ3 153 aa9.26□□□□□ -0.93
RAPGEF3-205ENST00000449771 KCNQ1DNQ9H478 68 aa9.26□□□□□ -0.93
RAPGEF3-205ENST00000449771 A0A087WTM6 91 aa9.25□□□□□ -0.93
RAPGEF3-205ENST00000449771 C15orf56Q8N910 161 aa9.24□□□□□ -0.93
RAPGEF3-205ENST00000449771 FN1P02751 2386 aaKnown RBP9.24□□□□□ -0.93
RAPGEF3-205ENST00000449771 PCSK5Q92824 1860 aa9.24□□□□□ -0.93
RAPGEF3-205ENST00000449771 H3BS24 57 aa9.23□□□□□ -0.93
RAPGEF3-205ENST00000449771 ZNF861PO60384 105 aa9.23□□□□□ -0.93
RAPGEF3-205ENST00000449771 ZFYVE26Q68DK2 2539 aa9.23□□□□□ -0.93
RAPGEF3-205ENST00000449771 IGFL1Q6UW32 110 aa9.22□□□□□ -0.93
RAPGEF3-205ENST00000449771 OBSCN-AS1Q96MR7 158 aa9.22□□□□□ -0.93
RAPGEF3-205ENST00000449771 SRCAPQ6ZRS2 3230 aa9.22□□□□□ -0.93
RAPGEF3-205ENST00000449771 SSBP3-AS1Q7Z2R9 100 aa9.21□□□□□ -0.93
RAPGEF3-205ENST00000449771 RBM12B-AS1Q9P1G2 102 aa9.21□□□□□ -0.93
RAPGEF3-205ENST00000449771 A0A096LNT2 108 aa9.2□□□□□ -0.94
RAPGEF3-205ENST00000449771 C9orf129Q5T035 196 aaKnown RBP9.19□□□□□ -0.94
RAPGEF3-205ENST00000449771 EP400Q96L91 3159 aa9.19□□□□□ -0.94
RAPGEF3-205ENST00000449771 PRR34Q9NV39 138 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms