RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 ANKRD39Q53RE8 183 aa7.49□□□□□ -1.21
AC004540.1-204ENST00000449537 LINC00469Q8N7U9 141 aa7.49□□□□□ -1.21
AC004540.1-204ENST00000449537 PLEKHB2Q96CS7 222 aa7.49□□□□□ -1.21
AC004540.1-204ENST00000449537 A0A087WZ39 114 aa7.48□□□□□ -1.21
AC004540.1-204ENST00000449537 IGHV1-58A0A0C4DH39 117 aa7.48□□□□□ -1.21
AC004540.1-204ENST00000449537 A0A1W2PNN7 141 aa7.48□□□□□ -1.21
AC004540.1-204ENST00000449537 LGALS3P17931 250 aaKnown RBP7.48□□□□□ -1.21
AC004540.1-204ENST00000449537 MALP21145 153 aa7.48□□□□□ -1.21
AC004540.1-204ENST00000449537 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.47□□□□□ -1.21
AC004540.1-204ENST00000449537 F8WDY8 70 aa7.47□□□□□ -1.21
AC004540.1-204ENST00000449537 ZNF22P17026 224 aaPredicted RBP7.47□□□□□ -1.21
AC004540.1-204ENST00000449537 PTTG1IPP53801 180 aa7.47□□□□□ -1.21
AC004540.1-204ENST00000449537 SFTA2Q6UW10 78 aa7.47□□□□□ -1.21
AC004540.1-204ENST00000449537 TMEM223A0PJW6 202 aa7.46□□□□□ -1.22
AC004540.1-204ENST00000449537 M0R143 59 aa7.46□□□□□ -1.22
AC004540.1-204ENST00000449537 LEPROTO15243 131 aa7.46□□□□□ -1.22
AC004540.1-204ENST00000449537 GAGE2BQ13066 116 aa7.46□□□□□ -1.22
AC004540.1-204ENST00000449537 BOD1L2Q8IYS8 172 aa7.46□□□□□ -1.22
AC004540.1-204ENST00000449537 CARD19Q96LW7 228 aa7.46□□□□□ -1.22
AC004540.1-204ENST00000449537 LINC00587B1AMM8 73 aa7.45□□□□□ -1.22
AC004540.1-204ENST00000449537 CXCL5P42830 114 aa7.45□□□□□ -1.22
AC004540.1-204ENST00000449537 CDKN2A-AS1Q9UH64 79 aa7.45□□□□□ -1.22
AC004540.1-204ENST00000449537 MUC17Q685J3 4493 aa7.44□□□□□ -1.22
AC004540.1-204ENST00000449537 MYMXA0A1B0GTQ4 84 aa7.44□□□□□ -1.22
AC004540.1-204ENST00000449537 ZNF815PA8K554 130 aa7.44□□□□□ -1.22
AC004540.1-204ENST00000449537 CRYGAP11844 174 aa7.44□□□□□ -1.22
AC004540.1-204ENST00000449537 SCGB1D4Q6XE38 83 aa7.44□□□□□ -1.22
AC004540.1-204ENST00000449537 PHF5AQ7RTV0 110 aaKnown RBP7.44□□□□□ -1.22
AC004540.1-204ENST00000449537 J3QQQ9 107 aa7.43□□□□□ -1.22
AC004540.1-204ENST00000449537 CTAG1AP78358 180 aa7.43□□□□□ -1.22
AC004540.1-204ENST00000449537 TPRXLQ17RH7 258 aa7.43□□□□□ -1.22
AC004540.1-204ENST00000449537 LBHQ53QV2 105 aaPredicted RBP7.43□□□□□ -1.22
AC004540.1-204ENST00000449537 C9orf116Q5BN46 136 aaPredicted RBP7.43□□□□□ -1.22
AC004540.1-204ENST00000449537 PCP2Q8IVA1 136 aa7.43□□□□□ -1.22
AC004540.1-204ENST00000449537 Q8IZM0 81 aa7.43□□□□□ -1.22
AC004540.1-204ENST00000449537 LINC00526Q96FQ7 95 aa7.43□□□□□ -1.22
AC004540.1-204ENST00000449537 HIGD1BQ9P298 99 aa7.43□□□□□ -1.22
AC004540.1-204ENST00000449537 IGKV2D-26A0A0A0MRZ7 120 aa7.42□□□□□ -1.22
AC004540.1-204ENST00000449537 IGLV5-39A0A0G2JS06 123 aa7.42□□□□□ -1.22
AC004540.1-204ENST00000449537 LOC107984640A0A0U1RRK4 108 aa7.42□□□□□ -1.22
AC004540.1-204ENST00000449537 SMIM1B2RUZ4 78 aa7.42□□□□□ -1.22
AC004540.1-204ENST00000449537 ZNF561-AS1K7EIQ3 104 aa7.42□□□□□ -1.22
AC004540.1-204ENST00000449537 HSD52Q0P140 79 aa7.42□□□□□ -1.22
AC004540.1-204ENST00000449537 C5orf38Q86SI9 138 aa7.42□□□□□ -1.22
AC004540.1-204ENST00000449537 ORAOV1Q8WV07 137 aa7.42□□□□□ -1.22
AC004540.1-204ENST00000449537 C2orf48Q96LS8 159 aa7.42□□□□□ -1.22
AC004540.1-204ENST00000449537 PRSS2P07478 247 aa7.41□□□□□ -1.22
AC004540.1-204ENST00000449537 SPAG11BQ08648 103 aa7.41□□□□□ -1.22
AC004540.1-204ENST00000449537 SYCNQ0VAF6 134 aa7.41□□□□□ -1.22
AC004540.1-204ENST00000449537 SPINK8P0C7L1 97 aa7.4□□□□□ -1.22
AC004540.1-204ENST00000449537 BATFQ16520 125 aa7.4□□□□□ -1.22
AC004540.1-204ENST00000449537 TAL2Q16559 108 aa7.4□□□□□ -1.22
AC004540.1-204ENST00000449537 TMEM238C9JI98 176 aa7.39□□□□□ -1.23
AC004540.1-204ENST00000449537 NDUFA1O15239 70 aa7.39□□□□□ -1.23
AC004540.1-204ENST00000449537 RETNLBQ9BQ08 111 aa7.39□□□□□ -1.23
AC004540.1-204ENST00000449537 IGLV7-46A0A075B6I9 117 aa7.38□□□□□ -1.23
AC004540.1-204ENST00000449537 A6NDN8 102 aa7.38□□□□□ -1.23
AC004540.1-204ENST00000449537 C2orf91Q6ZV80 131 aa7.38□□□□□ -1.23
AC004540.1-204ENST00000449537 COX7B2Q8TF08 81 aa7.38□□□□□ -1.23
AC004540.1-204ENST00000449537 COPS9Q8WXC6 57 aa7.38□□□□□ -1.23
AC004540.1-204ENST00000449537 HIST1H4GQ99525 98 aa7.38□□□□□ -1.23
AC004540.1-204ENST00000449537 NDUFA12Q9UI09 145 aa7.38□□□□□ -1.23
AC004540.1-204ENST00000449537 TRBV30A0A0K0K1B3 111 aa7.37□□□□□ -1.23
AC004540.1-204ENST00000449537 TMEM238LA0A1B0GVL6 79 aa7.37□□□□□ -1.23
AC004540.1-204ENST00000449537 A6NJY4 79 aa7.37□□□□□ -1.23
AC004540.1-204ENST00000449537 CKS1BP61024 79 aa7.37□□□□□ -1.23
AC004540.1-204ENST00000449537 HERV-K104P63124 156 aa7.37□□□□□ -1.23
AC004540.1-204ENST00000449537 RNF151Q2KHN1 245 aa7.37□□□□□ -1.23
AC004540.1-204ENST00000449537 COL5A1-AS1Q5SY13 56 aa7.37□□□□□ -1.23
AC004540.1-204ENST00000449537 CAMK2N2Q96S95 79 aa7.37□□□□□ -1.23
AC004540.1-204ENST00000449537 HINT1P49773 126 aaPredicted RBP7.36□□□□□ -1.23
AC004540.1-204ENST00000449537 KIAA0087Q14695 138 aa7.36□□□□□ -1.23
AC004540.1-204ENST00000449537 C6orf226Q5I0X4 101 aa7.36□□□□□ -1.23
AC004540.1-204ENST00000449537 TTTY13Q9BZ97 58 aa7.36□□□□□ -1.23
AC004540.1-204ENST00000449537 TSPEAR-AS2P59090 65 aa7.35□□□□□ -1.23
AC004540.1-204ENST00000449537 KRTAP11-1Q8IUC1 163 aa7.35□□□□□ -1.23
AC004540.1-204ENST00000449537 SPANXB1Q9NS25 103 aaPredicted RBP7.35□□□□□ -1.23
AC004540.1-204ENST00000449537 TOMM7Q9P0U1 55 aa7.35□□□□□ -1.23
AC004540.1-204ENST00000449537 TP73-AS1Q9UF72 201 aa7.35□□□□□ -1.23
AC004540.1-204ENST00000449537 TIMM17BO60830 172 aa7.34□□□□□ -1.23
AC004540.1-204ENST00000449537 BVES-AS1Q5T3Y7 98 aa7.34□□□□□ -1.23
AC004540.1-204ENST00000449537 Q6ZVH6 145 aa7.34□□□□□ -1.23
AC004540.1-204ENST00000449537 SNHG12Q9BXW3 62 aa7.34□□□□□ -1.23
AC004540.1-204ENST00000449537 COX17Q14061 63 aa7.33□□□□□ -1.24
AC004540.1-204ENST00000449537 MEIG1Q5JSS6 88 aa7.33□□□□□ -1.24
AC004540.1-204ENST00000449537 CEND1Q8N111 149 aa7.33□□□□□ -1.24
AC004540.1-204ENST00000449537 TYMSOSQ8TAI1 123 aa7.33□□□□□ -1.24
AC004540.1-204ENST00000449537 A0A0J9YXY3 114 aa7.32□□□□□ -1.24
AC004540.1-204ENST00000449537 TLX1NBP0CAT3 122 aa7.32□□□□□ -1.24
AC004540.1-204ENST00000449537 CFC1BP0CG36 223 aa7.32□□□□□ -1.24
AC004540.1-204ENST00000449537 RPL24P83731 157 aaKnown RBP7.32□□□□□ -1.24
AC004540.1-204ENST00000449537 RPL18AQ02543 176 aaKnown RBP7.32□□□□□ -1.24
AC004540.1-204ENST00000449537 ZNF625Q96I27 306 aaPredicted RBP7.32□□□□□ -1.24
AC004540.1-204ENST00000449537 KRTAP4-1Q9BYQ7 146 aa7.32□□□□□ -1.24
AC004540.1-204ENST00000449537 ASB16-AS1Q495Z4 193 aa7.31□□□□□ -1.24
AC004540.1-204ENST00000449537 IFITM1P13164 125 aa7.3□□□□□ -1.24
AC004540.1-204ENST00000449537 SPANXDQ9BXN6 97 aa7.3□□□□□ -1.24
AC004540.1-204ENST00000449537 PPDPFQ9H3Y8 114 aa7.3□□□□□ -1.24
AC004540.1-204ENST00000449537 SPANXCQ9NY87 97 aa7.3□□□□□ -1.24
AC004540.1-204ENST00000449537 NDUFC2-KCTD14E9PQ53 114 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms