RNA–Protein interactions for RNA: ENST00000449159.5

SMPD4-211, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 635 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-211ENST00000449159 RPL37AP61513 92 aaKnown RBP6.63□□□□□ -1.35
SMPD4-211ENST00000449159 COX17Q14061 63 aa6.63□□□□□ -1.35
SMPD4-211ENST00000449159 ANKRD39Q53RE8 183 aa6.63□□□□□ -1.35
SMPD4-211ENST00000449159 SND1-IT1Q9HBX3 110 aa6.63□□□□□ -1.35
SMPD4-211ENST00000449159 M0QXV9 152 aa6.62□□□□□ -1.35
SMPD4-211ENST00000449159 NMUP48645 174 aa6.62□□□□□ -1.35
SMPD4-211ENST00000449159 HERV-K104P63124 156 aa6.62□□□□□ -1.35
SMPD4-211ENST00000449159 MEIG1Q5JSS6 88 aa6.62□□□□□ -1.35
SMPD4-211ENST00000449159 KRTAP11-1Q8IUC1 163 aa6.62□□□□□ -1.35
SMPD4-211ENST00000449159 C7orf33Q8WU49 177 aa6.62□□□□□ -1.35
SMPD4-211ENST00000449159 TTTY13Q9BZ97 58 aa6.62□□□□□ -1.35
SMPD4-211ENST00000449159 PLA2G1BP04054 148 aaKnown RBP6.61□□□□□ -1.35
SMPD4-211ENST00000449159 DAND5Q8N907 189 aa6.61□□□□□ -1.35
SMPD4-211ENST00000449159 Q8NDZ9 215 aa6.61□□□□□ -1.35
SMPD4-211ENST00000449159 FAT3Q8TDW7 4589 aa6.6□□□□□ -1.35
SMPD4-211ENST00000449159 HNRNPA3P51991 378 aaKnown RBP6.6□□□□□ -1.35
SMPD4-211ENST00000449159 PRR3P79522 188 aaKnown RBP6.6□□□□□ -1.35
SMPD4-211ENST00000449159 MIR7-3HGQ8N6C7 128 aa6.6□□□□□ -1.35
SMPD4-211ENST00000449159 C22orf24Q9Y442 160 aa6.6□□□□□ -1.35
SMPD4-211ENST00000449159 LRP1Q07954 4544 aaKnown RBP6.6□□□□□ -1.35
SMPD4-211ENST00000449159 A0A0J9YXY3 114 aa6.59□□□□□ -1.35
SMPD4-211ENST00000449159 SCGB1D1O95968 90 aa6.59□□□□□ -1.35
SMPD4-211ENST00000449159 S100A12P80511 92 aa6.59□□□□□ -1.35
SMPD4-211ENST00000449159 PLA2G2DQ9UNK4 145 aa6.59□□□□□ -1.35
SMPD4-211ENST00000449159 ZNF815PA8K554 130 aa6.58□□□□□ -1.36
SMPD4-211ENST00000449159 AKR1D1P51857 326 aa6.58□□□□□ -1.36
SMPD4-211ENST00000449159 PSORS1C2Q9UIG4 136 aa6.58□□□□□ -1.36
SMPD4-211ENST00000449159 HMCN2Q8NDA2 5059 aa6.58□□□□□ -1.36
SMPD4-211ENST00000449159 IGLV5-37A0A075B6J1 123 aa6.57□□□□□ -1.36
SMPD4-211ENST00000449159 GAGE10A6NGK3 116 aa6.57□□□□□ -1.36
SMPD4-211ENST00000449159 VPREB1P12018 145 aa6.57□□□□□ -1.36
SMPD4-211ENST00000449159 UBE2BP63146 152 aa6.57□□□□□ -1.36
SMPD4-211ENST00000449159 ADAMTSL4-AS1Q5T5F5 129 aa6.57□□□□□ -1.36
SMPD4-211ENST00000449159 MRPL55Q7Z7F7 128 aaKnown RBP6.57□□□□□ -1.36
SMPD4-211ENST00000449159 PCP2Q8IVA1 136 aa6.57□□□□□ -1.36
SMPD4-211ENST00000449159 KRTAP29-1A8MX34 341 aaPredicted RBP6.56□□□□□ -1.36
SMPD4-211ENST00000449159 LINC00587B1AMM8 73 aa6.56□□□□□ -1.36
SMPD4-211ENST00000449159 EIF4EBP3O60516 100 aaPredicted RBP6.56□□□□□ -1.36
SMPD4-211ENST00000449159 LINC00518Q8N0U6 118 aa6.56□□□□□ -1.36
SMPD4-211ENST00000449159 NKAPP1Q8N9T2 125 aa6.56□□□□□ -1.36
SMPD4-211ENST00000449159 LINC00167Q96N53 147 aa6.56□□□□□ -1.36
SMPD4-211ENST00000449159 LITAFQ99732 161 aa6.56□□□□□ -1.36
SMPD4-211ENST00000449159 TP73-AS1Q9UF72 201 aa6.56□□□□□ -1.36
SMPD4-211ENST00000449159 UBR4Q5T4S7 5183 aa6.56□□□□□ -1.36
SMPD4-211ENST00000449159 RPL37AP8A6NKH3 93 aa6.55□□□□□ -1.36
SMPD4-211ENST00000449159 NPC2P61916 151 aa6.55□□□□□ -1.36
SMPD4-211ENST00000449159 BOD1L2Q8IYS8 172 aa6.55□□□□□ -1.36
SMPD4-211ENST00000449159 HSBP1L1C9JCN9 74 aa6.54□□□□□ -1.36
SMPD4-211ENST00000449159 RPL24P83731 157 aaKnown RBP6.54□□□□□ -1.36
SMPD4-211ENST00000449159 LBHQ53QV2 105 aaPredicted RBP6.54□□□□□ -1.36
SMPD4-211ENST00000449159 C1orf137Q5JT78 98 aa6.54□□□□□ -1.36
SMPD4-211ENST00000449159 SOSTDC1Q6X4U4 206 aa6.54□□□□□ -1.36
SMPD4-211ENST00000449159 IGKV2-28A0A075B6P5 120 aa6.53□□□□□ -1.36
SMPD4-211ENST00000449159 NCR3O14931 201 aa6.53□□□□□ -1.36
SMPD4-211ENST00000449159 IGKV2D-28P01615 120 aa6.53□□□□□ -1.36
SMPD4-211ENST00000449159 LOC107984156A0A0G2JMH3 177 aa6.52□□□□□ -1.37
SMPD4-211ENST00000449159 TIMM17BO60830 172 aa6.52□□□□□ -1.37
SMPD4-211ENST00000449159 JOSD1Q15040 202 aaPredicted RBP6.52□□□□□ -1.37
SMPD4-211ENST00000449159 SCGB1D4Q6XE38 83 aa6.52□□□□□ -1.37
SMPD4-211ENST00000449159 ARL17AQ8IVW1 177 aa6.52□□□□□ -1.37
SMPD4-211ENST00000449159 MIEN1Q9BRT3 115 aa6.51□□□□□ -1.37
SMPD4-211ENST00000449159 TNXBP22105 4242 aa6.5□□□□□ -1.37
SMPD4-211ENST00000449159 IGLV1-50A0A075B6I6 118 aa6.5□□□□□ -1.37
SMPD4-211ENST00000449159 TMEM238C9JI98 176 aa6.5□□□□□ -1.37
SMPD4-211ENST00000449159 M0R378 163 aa6.5□□□□□ -1.37
SMPD4-211ENST00000449159 IGLV7-43P04211 117 aa6.5□□□□□ -1.37
SMPD4-211ENST00000449159 PYY3Q5JQD4 70 aa6.5□□□□□ -1.37
SMPD4-211ENST00000449159 LINC00308Q8TCZ7 52 aa6.5□□□□□ -1.37
SMPD4-211ENST00000449159 PAM16Q9Y3D7 125 aa6.5□□□□□ -1.37
SMPD4-211ENST00000449159 SRSF9Q13242 221 aaKnown RBP eCLIP6.49□□□□□ -1.37
SMPD4-211ENST00000449159 SPANXDQ9BXN6 97 aa6.49□□□□□ -1.37
SMPD4-211ENST00000449159 SPANXCQ9NY87 97 aa6.49□□□□□ -1.37
SMPD4-211ENST00000449159 SPATA45Q537H7 98 aa6.48□□□□□ -1.37
SMPD4-211ENST00000449159 VAMP8Q9BV40 100 aa6.48□□□□□ -1.37
SMPD4-211ENST00000449159 TRBV10-3A0A0K0K1G6 114 aa6.47□□□□□ -1.37
SMPD4-211ENST00000449159 BCE1O60756 84 aa6.47□□□□□ -1.37
SMPD4-211ENST00000449159 NDUFC2O95298 119 aa6.47□□□□□ -1.37
SMPD4-211ENST00000449159 OXTP01178 125 aa6.47□□□□□ -1.37
SMPD4-211ENST00000449159 COX8AP10176 69 aa6.47□□□□□ -1.37
SMPD4-211ENST00000449159 SPINK6Q6UWN8 80 aa6.47□□□□□ -1.37
SMPD4-211ENST00000449159 TMEM126AQ9H061 195 aa6.47□□□□□ -1.37
SMPD4-211ENST00000449159 SPANXB1Q9NS25 103 aaPredicted RBP6.47□□□□□ -1.37
SMPD4-211ENST00000449159 TRBV10-2A0A0K0K1G8 114 aa6.46□□□□□ -1.38
SMPD4-211ENST00000449159 REG3GQ6UW15 175 aa6.46□□□□□ -1.38
SMPD4-211ENST00000449159 C14orf144Q96I85 54 aa6.46□□□□□ -1.38
SMPD4-211ENST00000449159 MUSTN1Q8IVN3 82 aa6.45□□□□□ -1.38
SMPD4-211ENST00000449159 C12orf57Q99622 126 aa6.45□□□□□ -1.38
SMPD4-211ENST00000449159 PCP4L1A6NKN8 68 aa6.44□□□□□ -1.38
SMPD4-211ENST00000449159 ZNF861PO60384 105 aa6.44□□□□□ -1.38
SMPD4-211ENST00000449159 SMIM6P0DI80 62 aa6.44□□□□□ -1.38
SMPD4-211ENST00000449159 DDTP30046 118 aa6.44□□□□□ -1.38
SMPD4-211ENST00000449159 PRLHP81277 87 aa6.44□□□□□ -1.38
SMPD4-211ENST00000449159 KRTAP13-1Q8IUC0 172 aa6.44□□□□□ -1.38
SMPD4-211ENST00000449159 KCNQ1DNQ9H478 68 aa6.44□□□□□ -1.38
SMPD4-211ENST00000449159 H0Y9J4 135 aa6.43□□□□□ -1.38
SMPD4-211ENST00000449159 PRYO14603 147 aa6.43□□□□□ -1.38
SMPD4-211ENST00000449159 DLEU1O43261 78 aa6.43□□□□□ -1.38
SMPD4-211ENST00000449159 IGLV6-57P01721 117 aa6.43□□□□□ -1.38
SMPD4-211ENST00000449159 IFITM1P13164 125 aa6.43□□□□□ -1.38
SMPD4-211ENST00000449159 UBE2AP49459 152 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms