RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 HIST1H2BOP23527 126 aa8.37□□□□□ -1.07
RTFDC1-204ENST00000449062 HIST1H2BBP33778 126 aa8.37□□□□□ -1.07
RTFDC1-204ENST00000449062 LINC00158P58513 81 aa8.37□□□□□ -1.07
RTFDC1-204ENST00000449062 HIST1H2BDP58876 126 aa8.37□□□□□ -1.07
RTFDC1-204ENST00000449062 HIST1H2BCP62807 126 aa8.37□□□□□ -1.07
RTFDC1-204ENST00000449062 RPL24P83731 157 aaKnown RBP8.37□□□□□ -1.07
RTFDC1-204ENST00000449062 HIST2H2BEQ16778 126 aa8.37□□□□□ -1.07
RTFDC1-204ENST00000449062 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.37□□□□□ -1.07
RTFDC1-204ENST00000449062 HIST1H2BHQ93079 126 aa8.37□□□□□ -1.07
RTFDC1-204ENST00000449062 HIST1H2BNQ99877 126 aa8.37□□□□□ -1.07
RTFDC1-204ENST00000449062 HIST1H2BMQ99879 126 aa8.37□□□□□ -1.07
RTFDC1-204ENST00000449062 HSPB8Q9UJY1 196 aa8.37□□□□□ -1.07
RTFDC1-204ENST00000449062 IGKV2-28A0A075B6P5 120 aa8.36□□□□□ -1.07
RTFDC1-204ENST00000449062 A0A0U1RRA0 63 aa8.36□□□□□ -1.07
RTFDC1-204ENST00000449062 H0Y8G0 127 aa8.36□□□□□ -1.07
RTFDC1-204ENST00000449062 IGKV2D-28P01615 120 aa8.36□□□□□ -1.07
RTFDC1-204ENST00000449062 SMIM13P0DJ93 91 aa8.36□□□□□ -1.07
RTFDC1-204ENST00000449062 TSPEAR-AS2P59090 65 aa8.36□□□□□ -1.07
RTFDC1-204ENST00000449062 NDUFA12Q9UI09 145 aa8.36□□□□□ -1.07
RTFDC1-204ENST00000449062 HERV-K104P63124 156 aa8.35□□□□□ -1.07
RTFDC1-204ENST00000449062 PMCHL2Q9BQD1 86 aa8.35□□□□□ -1.07
RTFDC1-204ENST00000449062 TMEM238C9JI98 176 aa8.34□□□□□ -1.07
RTFDC1-204ENST00000449062 M0R378 163 aa8.34□□□□□ -1.07
RTFDC1-204ENST00000449062 LEPROTO15243 131 aa8.34□□□□□ -1.07
RTFDC1-204ENST00000449062 DPM2O94777 84 aa8.34□□□□□ -1.07
RTFDC1-204ENST00000449062 PLNP26678 52 aa8.34□□□□□ -1.07
RTFDC1-204ENST00000449062 TMEM126AQ9H061 195 aa8.34□□□□□ -1.07
RTFDC1-204ENST00000449062 LOC107984156A0A0G2JMH3 177 aa8.33□□□□□ -1.08
RTFDC1-204ENST00000449062 MYMXA0A1B0GTQ4 84 aa8.33□□□□□ -1.08
RTFDC1-204ENST00000449062 ARL17AQ8IVW1 177 aa8.33□□□□□ -1.08
RTFDC1-204ENST00000449062 MIR7-3HGQ8N6C7 128 aa8.33□□□□□ -1.08
RTFDC1-204ENST00000449062 A0A087X002 238 aa8.32□□□□□ -1.08
RTFDC1-204ENST00000449062 RPL13AP40429 203 aaKnown RBP8.32□□□□□ -1.08
RTFDC1-204ENST00000449062 PLEKHB2Q96CS7 222 aa8.32□□□□□ -1.08
RTFDC1-204ENST00000449062 LINC00587B1AMM8 73 aa8.31□□□□□ -1.08
RTFDC1-204ENST00000449062 J3QQQ9 107 aa8.31□□□□□ -1.08
RTFDC1-204ENST00000449062 IGKCP01834 107 aa8.31□□□□□ -1.08
RTFDC1-204ENST00000449062 ANAPC11Q9NYG5 84 aa8.31□□□□□ -1.08
RTFDC1-204ENST00000449062 UBE2AP49459 152 aa8.3□□□□□ -1.08
RTFDC1-204ENST00000449062 MEIG1Q5JSS6 88 aa8.3□□□□□ -1.08
RTFDC1-204ENST00000449062 COA6Q5JTJ3 125 aaKnown RBP8.3□□□□□ -1.08
RTFDC1-204ENST00000449062 BOD1L2Q8IYS8 172 aa8.3□□□□□ -1.08
RTFDC1-204ENST00000449062 MAP1LC3CQ9BXW4 147 aa8.3□□□□□ -1.08
RTFDC1-204ENST00000449062 SYS1-DBNDD2H3BUS1 97 aa8.29□□□□□ -1.08
RTFDC1-204ENST00000449062 PRLHP81277 87 aa8.29□□□□□ -1.08
RTFDC1-204ENST00000449062 LPAP08519 4548 aa8.28□□□□□ -1.08
RTFDC1-204ENST00000449062 ATP6V1G1O75348 118 aa8.28□□□□□ -1.08
RTFDC1-204ENST00000449062 NMUP48645 174 aa8.28□□□□□ -1.08
RTFDC1-204ENST00000449062 KRTAP13-2Q52LG2 175 aa8.28□□□□□ -1.08
RTFDC1-204ENST00000449062 RNF213Q63HN8 5207 aa8.28□□□□□ -1.08
RTFDC1-204ENST00000449062 IGKV2D-26A0A0A0MRZ7 120 aa8.27□□□□□ -1.09
RTFDC1-204ENST00000449062 KRTAP4-16G5E9R7 235 aaPredicted RBP8.27□□□□□ -1.09
RTFDC1-204ENST00000449062 CRYGAP11844 174 aa8.27□□□□□ -1.09
RTFDC1-204ENST00000449062 SPRR1AP35321 89 aa8.27□□□□□ -1.09
RTFDC1-204ENST00000449062 LINC01545Q5VT33 79 aa8.27□□□□□ -1.09
RTFDC1-204ENST00000449062 FAM19A1Q7Z5A9 133 aa8.27□□□□□ -1.09
RTFDC1-204ENST00000449062 KCNQ1DNQ9H478 68 aa8.27□□□□□ -1.09
RTFDC1-204ENST00000449062 E9PLD3 99 aa8.26□□□□□ -1.09
RTFDC1-204ENST00000449062 HERVK_113P61574 105 aa8.26□□□□□ -1.09
RTFDC1-204ENST00000449062 FAM229BQ4G0N7 80 aa8.26□□□□□ -1.09
RTFDC1-204ENST00000449062 DAND5Q8N907 189 aa8.26□□□□□ -1.09
RTFDC1-204ENST00000449062 EIF4EBP3O60516 100 aaPredicted RBP8.25□□□□□ -1.09
RTFDC1-204ENST00000449062 ADAMTSL4-AS1Q5T5F5 129 aa8.25□□□□□ -1.09
RTFDC1-204ENST00000449062 PET117Q6UWS5 81 aa8.25□□□□□ -1.09
RTFDC1-204ENST00000449062 TRBV10-3A0A0K0K1G6 114 aa8.24□□□□□ -1.09
RTFDC1-204ENST00000449062 LGALS3P17931 250 aaKnown RBP8.24□□□□□ -1.09
RTFDC1-204ENST00000449062 A0A0J9YXY3 114 aa8.23□□□□□ -1.09
RTFDC1-204ENST00000449062 PRYO14603 147 aa8.23□□□□□ -1.09
RTFDC1-204ENST00000449062 NCR3O14931 201 aa8.23□□□□□ -1.09
RTFDC1-204ENST00000449062 SOSTDC1Q6X4U4 206 aa8.23□□□□□ -1.09
RTFDC1-204ENST00000449062 LINC00337Q8N6G1 96 aa8.23□□□□□ -1.09
RTFDC1-204ENST00000449062 TRBV10-2A0A0K0K1G8 114 aa8.22□□□□□ -1.09
RTFDC1-204ENST00000449062 C3orf79P0CE67 100 aa8.22□□□□□ -1.09
RTFDC1-204ENST00000449062 TYMSOSQ8TAI1 123 aa8.22□□□□□ -1.09
RTFDC1-204ENST00000449062 LITAFQ99732 161 aa8.21□□□□□ -1.1
RTFDC1-204ENST00000449062 NDUFC2O95298 119 aa8.2□□□□□ -1.1
RTFDC1-204ENST00000449062 HIGD2AQ9BW72 106 aa8.2□□□□□ -1.1
RTFDC1-204ENST00000449062 IGLV6-57P01721 117 aa8.19□□□□□ -1.1
RTFDC1-204ENST00000449062 SPRR4Q96PI1 79 aa8.19□□□□□ -1.1
RTFDC1-204ENST00000449062 TSPAN13O95857 204 aa8.18□□□□□ -1.1
RTFDC1-204ENST00000449062 SMCR5Q8TEV8 140 aa8.18□□□□□ -1.1
RTFDC1-204ENST00000449062 SPANXB1Q9NS25 103 aaPredicted RBP8.18□□□□□ -1.1
RTFDC1-204ENST00000449062 B5MCH6 92 aa8.17□□□□□ -1.1
RTFDC1-204ENST00000449062 DDTP30046 118 aa8.17□□□□□ -1.1
RTFDC1-204ENST00000449062 TIMM17BO60830 172 aa8.16□□□□□ -1.1
RTFDC1-204ENST00000449062 C3orf22Q8N5N4 141 aa8.16□□□□□ -1.1
RTFDC1-204ENST00000449062 TTTY13Q9BZ97 58 aa8.16□□□□□ -1.1
RTFDC1-204ENST00000449062 ETDCA0A1B0GVM5 59 aa8.15□□□□□ -1.1
RTFDC1-204ENST00000449062 KRTDAPP60985 99 aa8.15□□□□□ -1.1
RTFDC1-204ENST00000449062 LINC00308Q8TCZ7 52 aa8.15□□□□□ -1.1
RTFDC1-204ENST00000449062 ERC2-IT1O76042 136 aa8.14□□□□□ -1.11
RTFDC1-204ENST00000449062 NPC2P61916 151 aa8.14□□□□□ -1.11
RTFDC1-204ENST00000449062 CTAG1AP78358 180 aa8.14□□□□□ -1.11
RTFDC1-204ENST00000449062 LINC00304Q8N9R0 145 aa8.14□□□□□ -1.11
RTFDC1-204ENST00000449062 MIEN1Q9BRT3 115 aa8.14□□□□□ -1.11
RTFDC1-204ENST00000449062 PRR4Q16378 134 aa8.13□□□□□ -1.11
RTFDC1-204ENST00000449062 LINC00483Q53H64 154 aa8.13□□□□□ -1.11
RTFDC1-204ENST00000449062 Q9BRP9 147 aa8.13□□□□□ -1.11
RTFDC1-204ENST00000449062 ZNF815PA8K554 130 aa8.12□□□□□ -1.11
RTFDC1-204ENST00000449062 ANKRD39Q53RE8 183 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms