RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 KRTAP4-6Q9BYQ5 205 aa1.5□□□□□ -2.17
UBBP3-201ENST00000445497 CRIPTQ9P021 101 aa1.5□□□□□ -2.17
UBBP3-201ENST00000445497 SEC16AO15027 2179 aa1.49□□□□□ -2.17
UBBP3-201ENST00000445497 FREM1Q5H8C1 2179 aa1.49□□□□□ -2.17
UBBP3-201ENST00000445497 PRR14LQ5THK1 2151 aa1.49□□□□□ -2.17
UBBP3-201ENST00000445497 G3V318 75 aa1.49□□□□□ -2.17
UBBP3-201ENST00000445497 PRB2P02812 416 aaPredicted RBP1.49□□□□□ -2.17
UBBP3-201ENST00000445497 PRR9Q5T870 116 aa1.49□□□□□ -2.17
UBBP3-201ENST00000445497 LINC00575Q6W349 94 aa1.49□□□□□ -2.17
UBBP3-201ENST00000445497 PRRC2AP48634 2157 aaKnown RBP1.49□□□□□ -2.17
UBBP3-201ENST00000445497 SSC5DA1L4H1 1573 aa1.48□□□□□ -2.17
UBBP3-201ENST00000445497 KRTAP9-6A0A140TA67 174 aa1.48□□□□□ -2.17
UBBP3-201ENST00000445497 KRTAP9-7A8MTY7 169 aa1.48□□□□□ -2.17
UBBP3-201ENST00000445497 POLR2KP53803 58 aaKnown RBP1.48□□□□□ -2.17
UBBP3-201ENST00000445497 Q6ZRN7 208 aaPredicted RBP1.48□□□□□ -2.17
UBBP3-201ENST00000445497 USMG5Q96IX5 58 aa1.48□□□□□ -2.17
UBBP3-201ENST00000445497 COL4A2P08572 1712 aa1.48□□□□□ -2.17
UBBP3-201ENST00000445497 CEP192Q8TEP8 1941 aa1.47□□□□□ -2.17
UBBP3-201ENST00000445497 K7EQZ3 153 aa1.47□□□□□ -2.17
UBBP3-201ENST00000445497 KRTAP12-2P59991 146 aa1.47□□□□□ -2.17
UBBP3-201ENST00000445497 UBE2DNLQ8IWF7 75 aa1.47□□□□□ -2.17
UBBP3-201ENST00000445497 KRTAP4-12Q9BQ66 201 aa1.47□□□□□ -2.17
UBBP3-201ENST00000445497 TTTY10Q9BZA0 68 aa1.47□□□□□ -2.17
UBBP3-201ENST00000445497 BRWD1Q9NSI6 2320 aa1.47□□□□□ -2.17
UBBP3-201ENST00000445497 PLXNB2O15031 1838 aa1.46□□□□□ -2.18
UBBP3-201ENST00000445497 CCL22O00626 93 aa1.46□□□□□ -2.18
UBBP3-201ENST00000445497 KRTAP13-2Q52LG2 175 aa1.46□□□□□ -2.18
UBBP3-201ENST00000445497 ALPK2Q86TB3 2170 aa1.46□□□□□ -2.18
UBBP3-201ENST00000445497 MED13LQ71F56 2210 aa1.46□□□□□ -2.18
UBBP3-201ENST00000445497 KRTAP29-1A8MX34 341 aaPredicted RBP1.45□□□□□ -2.18
UBBP3-201ENST00000445497 MT3P25713 68 aa1.45□□□□□ -2.18
UBBP3-201ENST00000445497 DSCR10P59022 87 aa1.45□□□□□ -2.18
UBBP3-201ENST00000445497 MINOS1Q5TGZ0 78 aa1.45□□□□□ -2.18
UBBP3-201ENST00000445497 KRTAP9-4Q9BYQ2 154 aa1.45□□□□□ -2.18
UBBP3-201ENST00000445497 KRTAP4-8Q9BYQ9 185 aa1.45□□□□□ -2.18
UBBP3-201ENST00000445497 C6orf48Q9UBA6 75 aa1.45□□□□□ -2.18
UBBP3-201ENST00000445497 ZFHX3Q15911 3703 aa1.44□□□□□ -2.18
UBBP3-201ENST00000445497 ZFHX2Q9C0A1 2572 aaPredicted RBP1.44□□□□□ -2.18
UBBP3-201ENST00000445497 IGLV5-48A0A075B6I7 105 aa1.44□□□□□ -2.18
UBBP3-201ENST00000445497 PRB1P04280 392 aa1.44□□□□□ -2.18
UBBP3-201ENST00000445497 RPL37P61927 97 aaKnown RBP1.44□□□□□ -2.18
UBBP3-201ENST00000445497 PRCDQ00LT1 54 aa1.44□□□□□ -2.18
UBBP3-201ENST00000445497 LCE4AQ5TA78 99 aa1.44□□□□□ -2.18
UBBP3-201ENST00000445497 UNQ6190/PRO20217Q6UXQ8 127 aa1.44□□□□□ -2.18
UBBP3-201ENST00000445497 PRO3102Q9H379 93 aa1.44□□□□□ -2.18
UBBP3-201ENST00000445497 RTTNQ86VV8 2226 aa1.44□□□□□ -2.18
UBBP3-201ENST00000445497 GAS8-AS1O95177 125 aa1.43□□□□□ -2.18
UBBP3-201ENST00000445497 PIGYQ3MUY2 71 aa1.43□□□□□ -2.18
UBBP3-201ENST00000445497 MRPL34Q9BQ48 92 aaKnown RBP1.43□□□□□ -2.18
UBBP3-201ENST00000445497 GOLGA4Q13439 2230 aaKnown RBP1.43□□□□□ -2.18
UBBP3-201ENST00000445497 ADAMTS9Q9P2N4 1935 aa1.42□□□□□ -2.18
UBBP3-201ENST00000445497 TNRC6CQ9HCJ0 1690 aaKnown RBP1.42□□□□□ -2.18
UBBP3-201ENST00000445497 LCE3BQ5TA77 95 aa1.42□□□□□ -2.18
UBBP3-201ENST00000445497 IGFL1Q6UW32 110 aa1.42□□□□□ -2.18
UBBP3-201ENST00000445497 KRTAP9-3Q9BYQ3 159 aa1.42□□□□□ -2.18
UBBP3-201ENST00000445497 DEFB131AP59861 70 aa1.41□□□□□ -2.18
UBBP3-201ENST00000445497 RPL39P62891 51 aaKnown RBP1.41□□□□□ -2.18
UBBP3-201ENST00000445497 DEFB123Q8N688 67 aa1.41□□□□□ -2.18
UBBP3-201ENST00000445497 KRTAP9-9Q9BYP9 154 aa1.41□□□□□ -2.18
UBBP3-201ENST00000445497 KRTAP9-2Q9BYQ4 174 aa1.41□□□□□ -2.18
UBBP3-201ENST00000445497 F5P12259 2224 aa1.41□□□□□ -2.18
UBBP3-201ENST00000445497 ATRXP46100 2492 aa1.4□□□□□ -2.19
UBBP3-201ENST00000445497 H3BSH0 61 aa1.4□□□□□ -2.19
UBBP3-201ENST00000445497 PRB3Q04118 309 aaPredicted RBP1.4□□□□□ -2.19
UBBP3-201ENST00000445497 KNTC1P50748 2209 aa1.39□□□□□ -2.19
UBBP3-201ENST00000445497 KRTAP1-4P0C5Y4 121 aa1.39□□□□□ -2.19
UBBP3-201ENST00000445497 LYNX1P0DP58 116 aa1.39□□□□□ -2.19
UBBP3-201ENST00000445497 BRD3OSQ6XYD6 125 aa1.39□□□□□ -2.19
UBBP3-201ENST00000445497 RPL39LQ96EH5 51 aaKnown RBP1.39□□□□□ -2.19
UBBP3-201ENST00000445497 COL4A4P53420 1690 aaPredicted RBP1.39□□□□□ -2.19
UBBP3-201ENST00000445497 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.38□□□□□ -2.19
UBBP3-201ENST00000445497 I3L2K1 104 aa1.38□□□□□ -2.19
UBBP3-201ENST00000445497 M0QY20 66 aa1.38□□□□□ -2.19
UBBP3-201ENST00000445497 KRTAP10-8P60410 259 aa1.38□□□□□ -2.19
UBBP3-201ENST00000445497 PCOTHQ58A44 107 aa1.38□□□□□ -2.19
UBBP3-201ENST00000445497 WFDC10BQ8IUB3 73 aa1.38□□□□□ -2.19
UBBP3-201ENST00000445497 ANKRD17O75179 2603 aaKnown RBP1.38□□□□□ -2.19
UBBP3-201ENST00000445497 H3BUA1 57 aa1.37□□□□□ -2.19
UBBP3-201ENST00000445497 SPINK9Q5DT21 86 aa1.37□□□□□ -2.19
UBBP3-201ENST00000445497 LCE5AQ5TCM9 118 aa1.37□□□□□ -2.19
UBBP3-201ENST00000445497 WFDC13Q8IUB5 93 aa1.37□□□□□ -2.19
UBBP3-201ENST00000445497 H0YAA0 97 aa1.36□□□□□ -2.19
UBBP3-201ENST00000445497 RPS27P42677 84 aaKnown RBP1.36□□□□□ -2.19
UBBP3-201ENST00000445497 FN1P02751 2386 aaKnown RBP1.36□□□□□ -2.19
UBBP3-201ENST00000445497 CACNA1CQ13936 2221 aa1.36□□□□□ -2.19
UBBP3-201ENST00000445497 COX6A2Q02221 97 aa1.35□□□□□ -2.19
UBBP3-201ENST00000445497 DEFB109BQ30KR1 87 aa1.35□□□□□ -2.19
UBBP3-201ENST00000445497 H1FX-AS1Q4G0G2 97 aa1.35□□□□□ -2.19
UBBP3-201ENST00000445497 Q6ZSA8 131 aa1.35□□□□□ -2.19
UBBP3-201ENST00000445497 KRTAP1-3Q8IUG1 177 aa1.35□□□□□ -2.19
UBBP3-201ENST00000445497 URB1O60287 2271 aaKnown RBP1.35□□□□□ -2.19
UBBP3-201ENST00000445497 PDE4DIPQ5VU43 2346 aa1.34□□□□□ -2.19
UBBP3-201ENST00000445497 TECTAO75443 2155 aa1.34□□□□□ -2.19
UBBP3-201ENST00000445497 SHANK1Q9Y566 2161 aa1.34□□□□□ -2.19
UBBP3-201ENST00000445497 K7EIM0 57 aa1.34□□□□□ -2.19
UBBP3-201ENST00000445497 DEFB106AQ8N104 65 aa1.34□□□□□ -2.19
UBBP3-201ENST00000445497 TMEM167AQ8TBQ9 72 aa1.34□□□□□ -2.19
UBBP3-201ENST00000445497 LEAP2Q969E1 77 aa1.34□□□□□ -2.19
UBBP3-201ENST00000445497 CACNA1EQ15878 2313 aa1.34□□□□□ -2.2
UBBP3-201ENST00000445497 KRTAP13-4Q3LI77 160 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms