RNA–Protein interactions for RNA: ENST00000444481.3

VCX3B-203, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-203ENST00000444481 HERV-K104P63124 156 aa10.79□□□□□ -0.68
VCX3B-203ENST00000444481 ATP6V1G1O75348 118 aa10.78□□□□□ -0.68
VCX3B-203ENST00000444481 A0A087X002 238 aa10.77□□□□□ -0.69
VCX3B-203ENST00000444481 SERF1AO75920 110 aa10.77□□□□□ -0.69
VCX3B-203ENST00000444481 SLC7A5P1Q8MH63 180 aa10.77□□□□□ -0.69
VCX3B-203ENST00000444481 Q8NDZ9 215 aa10.77□□□□□ -0.69
VCX3B-203ENST00000444481 A0A0U1RRA0 63 aa10.76□□□□□ -0.69
VCX3B-203ENST00000444481 LINC00310P59036 64 aa10.76□□□□□ -0.69
VCX3B-203ENST00000444481 MEIG1Q5JSS6 88 aa10.76□□□□□ -0.69
VCX3B-203ENST00000444481 FAM19A1Q7Z5A9 133 aa10.76□□□□□ -0.69
VCX3B-203ENST00000444481 TYMSOSQ8TAI1 123 aa10.76□□□□□ -0.69
VCX3B-203ENST00000444481 TMEM238C9JI98 176 aa10.75□□□□□ -0.69
VCX3B-203ENST00000444481 M0R378 163 aa10.75□□□□□ -0.69
VCX3B-203ENST00000444481 SMIM13P0DJ93 91 aa10.75□□□□□ -0.69
VCX3B-203ENST00000444481 FAM229BQ4G0N7 80 aa10.75□□□□□ -0.69
VCX3B-203ENST00000444481 NDUFA12Q9UI09 145 aa10.75□□□□□ -0.69
VCX3B-203ENST00000444481 HSPB8Q9UJY1 196 aa10.75□□□□□ -0.69
VCX3B-203ENST00000444481 MYMXA0A1B0GTQ4 84 aa10.74□□□□□ -0.69
VCX3B-203ENST00000444481 COLCA2A8K830 154 aa10.74□□□□□ -0.69
VCX3B-203ENST00000444481 H0Y8G0 127 aa10.74□□□□□ -0.69
VCX3B-203ENST00000444481 PLNP26678 52 aa10.74□□□□□ -0.69
VCX3B-203ENST00000444481 PRLHP81277 87 aa10.74□□□□□ -0.69
VCX3B-203ENST00000444481 MAP1LC3CQ9BXW4 147 aa10.73□□□□□ -0.69
VCX3B-203ENST00000444481 MIR7-3HGQ8N6C7 128 aa10.72□□□□□ -0.69
VCX3B-203ENST00000444481 LEPROTO15243 131 aa10.71□□□□□ -0.69
VCX3B-203ENST00000444481 BOD1L2Q8IYS8 172 aa10.71□□□□□ -0.69
VCX3B-203ENST00000444481 PLEKHB2Q96CS7 222 aa10.71□□□□□ -0.69
VCX3B-203ENST00000444481 ANAPC11Q9NYG5 84 aa10.71□□□□□ -0.69
VCX3B-203ENST00000444481 IGKV2D-26A0A0A0MRZ7 120 aa10.7□□□□□ -0.7
VCX3B-203ENST00000444481 DPM2O94777 84 aa10.7□□□□□ -0.7
VCX3B-203ENST00000444481 FABP4P15090 132 aa10.7□□□□□ -0.7
VCX3B-203ENST00000444481 LPAP08519 4548 aa10.69□□□□□ -0.7
VCX3B-203ENST00000444481 HERVK_113P61574 105 aa10.69□□□□□ -0.7
VCX3B-203ENST00000444481 PRR4Q16378 134 aa10.69□□□□□ -0.7
VCX3B-203ENST00000444481 TSPAN13O95857 204 aa10.68□□□□□ -0.7
VCX3B-203ENST00000444481 KRTAP13-2Q52LG2 175 aa10.68□□□□□ -0.7
VCX3B-203ENST00000444481 J3QQQ9 107 aa10.67□□□□□ -0.7
VCX3B-203ENST00000444481 PRYO14603 147 aa10.67□□□□□ -0.7
VCX3B-203ENST00000444481 IGKCP01834 107 aa10.67□□□□□ -0.7
VCX3B-203ENST00000444481 NMUP48645 174 aa10.67□□□□□ -0.7
VCX3B-203ENST00000444481 LOC107984156A0A0G2JMH3 177 aa10.66□□□□□ -0.7
VCX3B-203ENST00000444481 TSPEAR-AS2P59090 65 aa10.66□□□□□ -0.7
VCX3B-203ENST00000444481 ARL17AQ8IVW1 177 aa10.66□□□□□ -0.7
VCX3B-203ENST00000444481 HIGD2AQ9BW72 106 aa10.66□□□□□ -0.7
VCX3B-203ENST00000444481 KCNQ1DNQ9H478 68 aa10.66□□□□□ -0.7
VCX3B-203ENST00000444481 RNF213Q63HN8 5207 aa10.66□□□□□ -0.7
VCX3B-203ENST00000444481 CTAG1AP78358 180 aa10.65□□□□□ -0.7
VCX3B-203ENST00000444481 LINC00337Q8N6G1 96 aa10.65□□□□□ -0.7
VCX3B-203ENST00000444481 NCR3O14931 201 aa10.64□□□□□ -0.71
VCX3B-203ENST00000444481 SPRR1AP35321 89 aa10.64□□□□□ -0.71
VCX3B-203ENST00000444481 S100A12P80511 92 aa10.64□□□□□ -0.71
VCX3B-203ENST00000444481 LGALS3P17931 250 aaKnown RBP10.63□□□□□ -0.71
VCX3B-203ENST00000444481 LINC00304Q8N9R0 145 aa10.63□□□□□ -0.71
VCX3B-203ENST00000444481 PMCHL2Q9BQD1 86 aa10.63□□□□□ -0.71
VCX3B-203ENST00000444481 ZNF706Q9Y5V0 76 aaPredicted RBP10.62□□□□□ -0.71
VCX3B-203ENST00000444481 TRBV10-2A0A0K0K1G8 114 aa10.61□□□□□ -0.71
VCX3B-203ENST00000444481 TRBV10-3A0A0K0K1G6 114 aa10.6□□□□□ -0.71
VCX3B-203ENST00000444481 ETDCA0A1B0GVM5 59 aa10.6□□□□□ -0.71
VCX3B-203ENST00000444481 KRTAP4-16G5E9R7 235 aaPredicted RBP10.6□□□□□ -0.71
VCX3B-203ENST00000444481 DAND5Q8N907 189 aa10.6□□□□□ -0.71
VCX3B-203ENST00000444481 SPRR4Q96PI1 79 aa10.6□□□□□ -0.71
VCX3B-203ENST00000444481 MIEN1Q9BRT3 115 aa10.6□□□□□ -0.71
VCX3B-203ENST00000444481 HIST1H2BKO60814 126 aa10.59□□□□□ -0.71
VCX3B-203ENST00000444481 HIST1H2BJP06899 126 aa10.59□□□□□ -0.71
VCX3B-203ENST00000444481 HIST1H2BOP23527 126 aa10.59□□□□□ -0.71
VCX3B-203ENST00000444481 HIST1H2BBP33778 126 aa10.59□□□□□ -0.71
VCX3B-203ENST00000444481 HIST1H2BDP58876 126 aa10.59□□□□□ -0.71
VCX3B-203ENST00000444481 HIST1H2BCP62807 126 aa10.59□□□□□ -0.71
VCX3B-203ENST00000444481 HIST2H2BEQ16778 126 aa10.59□□□□□ -0.71
VCX3B-203ENST00000444481 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.59□□□□□ -0.71
VCX3B-203ENST00000444481 HIST1H2BHQ93079 126 aa10.59□□□□□ -0.71
VCX3B-203ENST00000444481 HIST1H2BNQ99877 126 aa10.59□□□□□ -0.71
VCX3B-203ENST00000444481 HIST1H2BMQ99879 126 aa10.59□□□□□ -0.71
VCX3B-203ENST00000444481 E9PLD3 99 aa10.58□□□□□ -0.72
VCX3B-203ENST00000444481 SYS1-DBNDD2H3BUS1 97 aa10.57□□□□□ -0.72
VCX3B-203ENST00000444481 NDUFC2O95298 119 aa10.57□□□□□ -0.72
VCX3B-203ENST00000444481 SPANXB1Q9NS25 103 aaPredicted RBP10.57□□□□□ -0.72
VCX3B-203ENST00000444481 DDTP30046 118 aa10.56□□□□□ -0.72
VCX3B-203ENST00000444481 SMCR5Q8TEV8 140 aa10.56□□□□□ -0.72
VCX3B-203ENST00000444481 SPAG11AQ6PDA7 123 aa10.55□□□□□ -0.72
VCX3B-203ENST00000444481 C3orf22Q8N5N4 141 aa10.55□□□□□ -0.72
VCX3B-203ENST00000444481 A0A0J9YXY3 114 aa10.54□□□□□ -0.72
VCX3B-203ENST00000444481 B5MCH6 92 aa10.53□□□□□ -0.72
VCX3B-203ENST00000444481 PET117Q6UWS5 81 aa10.53□□□□□ -0.72
VCX3B-203ENST00000444481 S100A7L2Q5SY68 101 aa10.52□□□□□ -0.73
VCX3B-203ENST00000444481 LINC01545Q5VT33 79 aa10.52□□□□□ -0.73
VCX3B-203ENST00000444481 IGLV6-57P01721 117 aa10.51□□□□□ -0.73
VCX3B-203ENST00000444481 LINC00483Q53H64 154 aa10.5□□□□□ -0.73
VCX3B-203ENST00000444481 ADAMTSL4-AS1Q5T5F5 129 aa10.5□□□□□ -0.73
VCX3B-203ENST00000444481 SOSTDC1Q6X4U4 206 aa10.49□□□□□ -0.73
VCX3B-203ENST00000444481 Q6ZRX8 168 aa10.49□□□□□ -0.73
VCX3B-203ENST00000444481 RETNLBQ9BQ08 111 aa10.49□□□□□ -0.73
VCX3B-203ENST00000444481 CBY1Q9Y3M2 126 aa10.49□□□□□ -0.73
VCX3B-203ENST00000444481 C4orf48Q5BLP8 95 aa10.48□□□□□ -0.73
VCX3B-203ENST00000444481 COA6Q5JTJ3 125 aaKnown RBP10.48□□□□□ -0.73
VCX3B-203ENST00000444481 TRAV23DV6A0A075B6W5 121 aa10.47□□□□□ -0.73
VCX3B-203ENST00000444481 TIMM17BO60830 172 aa10.47□□□□□ -0.73
VCX3B-203ENST00000444481 NPC2P61916 151 aa10.47□□□□□ -0.73
VCX3B-203ENST00000444481 JOSD1Q15040 202 aaPredicted RBP10.47□□□□□ -0.73
VCX3B-203ENST00000444481 PPDPFQ9H3Y8 114 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms