RNA–Protein interactions for RNA: ENST00000442892.2

SLC48A1-202, Transcript of solute carrier family 48 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC48A1, Length 1,024 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-202ENST00000442892 LEPROTO15243 131 aa7.56□□□□□ -1.2
SLC48A1-202ENST00000442892 LGALS3P17931 250 aaKnown RBP7.56□□□□□ -1.2
SLC48A1-202ENST00000442892 TSPEAR-AS2P59090 65 aa7.56□□□□□ -1.2
SLC48A1-202ENST00000442892 SMIM13P0DJ93 91 aa7.55□□□□□ -1.2
SLC48A1-202ENST00000442892 COX17Q14061 63 aa7.55□□□□□ -1.2
SLC48A1-202ENST00000442892 LBHQ53QV2 105 aaPredicted RBP7.55□□□□□ -1.2
SLC48A1-202ENST00000442892 KRTAP11-1Q8IUC1 163 aa7.55□□□□□ -1.2
SLC48A1-202ENST00000442892 SND1-IT1Q9HBX3 110 aa7.55□□□□□ -1.2
SLC48A1-202ENST00000442892 J3QQQ9 107 aa7.54□□□□□ -1.2
SLC48A1-202ENST00000442892 SCGB1D1O95968 90 aa7.54□□□□□ -1.2
SLC48A1-202ENST00000442892 AKR1D1P51857 326 aa7.54□□□□□ -1.2
SLC48A1-202ENST00000442892 HERV-K104P63124 156 aa7.54□□□□□ -1.2
SLC48A1-202ENST00000442892 MRPL55Q7Z7F7 128 aaKnown RBP7.54□□□□□ -1.2
SLC48A1-202ENST00000442892 DMBT1Q9UGM3 2413 aaPredicted RBP7.53□□□□□ -1.2
SLC48A1-202ENST00000442892 RPL37AP8A6NKH3 93 aa7.53□□□□□ -1.2
SLC48A1-202ENST00000442892 LOC105371267A0A1B0GV96 52 aa7.52□□□□□ -1.21
SLC48A1-202ENST00000442892 JOSD1Q15040 202 aaPredicted RBP7.52□□□□□ -1.21
SLC48A1-202ENST00000442892 RPL24P83731 157 aaKnown RBP7.51□□□□□ -1.21
SLC48A1-202ENST00000442892 ATOH7Q8N100 152 aa7.51□□□□□ -1.21
SLC48A1-202ENST00000442892 MIR7-3HGQ8N6C7 128 aa7.51□□□□□ -1.21
SLC48A1-202ENST00000442892 LINC00167Q96N53 147 aa7.51□□□□□ -1.21
SLC48A1-202ENST00000442892 LRP1Q07954 4544 aaKnown RBP7.5□□□□□ -1.21
SLC48A1-202ENST00000442892 IGKV2-28A0A075B6P5 120 aa7.5□□□□□ -1.21
SLC48A1-202ENST00000442892 KRTAP29-1A8MX34 341 aaPredicted RBP7.5□□□□□ -1.21
SLC48A1-202ENST00000442892 LINC00587B1AMM8 73 aa7.5□□□□□ -1.21
SLC48A1-202ENST00000442892 E9PLD3 99 aa7.5□□□□□ -1.21
SLC48A1-202ENST00000442892 IGKV2D-28P01615 120 aa7.5□□□□□ -1.21
SLC48A1-202ENST00000442892 IGLV7-43P04211 117 aa7.5□□□□□ -1.21
SLC48A1-202ENST00000442892 NMUP48645 174 aa7.5□□□□□ -1.21
SLC48A1-202ENST00000442892 SPINK6Q6UWN8 80 aa7.5□□□□□ -1.21
SLC48A1-202ENST00000442892 DAND5Q8N907 189 aa7.5□□□□□ -1.21
SLC48A1-202ENST00000442892 TP73-AS1Q9UF72 201 aa7.5□□□□□ -1.21
SLC48A1-202ENST00000442892 PLA2G2DQ9UNK4 145 aa7.5□□□□□ -1.21
SLC48A1-202ENST00000442892 FAT3Q8TDW7 4589 aa7.5□□□□□ -1.21
SLC48A1-202ENST00000442892 PYY3Q5JQD4 70 aa7.49□□□□□ -1.21
SLC48A1-202ENST00000442892 BOD1L2Q8IYS8 172 aa7.49□□□□□ -1.21
SLC48A1-202ENST00000442892 IGLV5-37A0A075B6J1 123 aa7.48□□□□□ -1.21
SLC48A1-202ENST00000442892 NCR3O14931 201 aa7.48□□□□□ -1.21
SLC48A1-202ENST00000442892 OXTP01178 125 aa7.48□□□□□ -1.21
SLC48A1-202ENST00000442892 VPREB1P12018 145 aa7.48□□□□□ -1.21
SLC48A1-202ENST00000442892 NPC2P61916 151 aa7.48□□□□□ -1.21
SLC48A1-202ENST00000442892 REG3GQ6UW15 175 aa7.48□□□□□ -1.21
SLC48A1-202ENST00000442892 Q8NDZ9 215 aa7.47□□□□□ -1.21
SLC48A1-202ENST00000442892 MIEN1Q9BRT3 115 aa7.47□□□□□ -1.21
SLC48A1-202ENST00000442892 ZNF815PA8K554 130 aa7.46□□□□□ -1.22
SLC48A1-202ENST00000442892 SRSF9Q13242 221 aaKnown RBP eCLIP7.46□□□□□ -1.22
SLC48A1-202ENST00000442892 DIRC1Q969H9 104 aa7.46□□□□□ -1.22
SLC48A1-202ENST00000442892 IGKV2D-26A0A0A0MRZ7 120 aa7.45□□□□□ -1.22
SLC48A1-202ENST00000442892 A0A0J9YXY3 114 aa7.45□□□□□ -1.22
SLC48A1-202ENST00000442892 HSBP1L1C9JCN9 74 aa7.45□□□□□ -1.22
SLC48A1-202ENST00000442892 TTTY13Q9BZ97 58 aa7.45□□□□□ -1.22
SLC48A1-202ENST00000442892 BCE1O60756 84 aa7.44□□□□□ -1.22
SLC48A1-202ENST00000442892 UBE2AP49459 152 aa7.44□□□□□ -1.22
SLC48A1-202ENST00000442892 ANKRD39Q53RE8 183 aa7.44□□□□□ -1.22
SLC48A1-202ENST00000442892 TMEM238C9JI98 176 aa7.43□□□□□ -1.22
SLC48A1-202ENST00000442892 H0Y9J4 135 aa7.43□□□□□ -1.22
SLC48A1-202ENST00000442892 M0R378 163 aa7.43□□□□□ -1.22
SLC48A1-202ENST00000442892 VAMP8Q9BV40 100 aa7.43□□□□□ -1.22
SLC48A1-202ENST00000442892 IGLV1-50A0A075B6I6 118 aa7.42□□□□□ -1.22
SLC48A1-202ENST00000442892 SMIM6P0DI80 62 aa7.42□□□□□ -1.22
SLC48A1-202ENST00000442892 RPL28P46779 137 aaKnown RBP7.42□□□□□ -1.22
SLC48A1-202ENST00000442892 SCGB1D4Q6XE38 83 aa7.42□□□□□ -1.22
SLC48A1-202ENST00000442892 FAM19A1Q7Z5A9 133 aa7.42□□□□□ -1.22
SLC48A1-202ENST00000442892 HERC1Q15751 4861 aa7.41□□□□□ -1.22
SLC48A1-202ENST00000442892 ZNF861PO60384 105 aa7.41□□□□□ -1.22
SLC48A1-202ENST00000442892 ADAMTSL4-AS1Q5T5F5 129 aa7.41□□□□□ -1.22
SLC48A1-202ENST00000442892 PAM16Q9Y3D7 125 aa7.41□□□□□ -1.22
SLC48A1-202ENST00000442892 S100A12P80511 92 aa7.4□□□□□ -1.22
SLC48A1-202ENST00000442892 PRLHP81277 87 aa7.4□□□□□ -1.22
SLC48A1-202ENST00000442892 SPATA45Q537H7 98 aa7.4□□□□□ -1.22
SLC48A1-202ENST00000442892 TMEM126AQ9H061 195 aa7.4□□□□□ -1.22
SLC48A1-202ENST00000442892 LINC01600Q96MT4 127 aa7.39□□□□□ -1.23
SLC48A1-202ENST00000442892 TRBV10-3A0A0K0K1G6 114 aa7.38□□□□□ -1.23
SLC48A1-202ENST00000442892 MT1HL1P0DM35 61 aa7.38□□□□□ -1.23
SLC48A1-202ENST00000442892 S100A7L2Q5SY68 101 aa7.38□□□□□ -1.23
SLC48A1-202ENST00000442892 SOSTDC1Q6X4U4 206 aa7.38□□□□□ -1.23
SLC48A1-202ENST00000442892 PCP2Q8IVA1 136 aa7.38□□□□□ -1.23
SLC48A1-202ENST00000442892 TIMM17BO60830 172 aa7.37□□□□□ -1.23
SLC48A1-202ENST00000442892 DDTP30046 118 aa7.37□□□□□ -1.23
SLC48A1-202ENST00000442892 LINC00308Q8TCZ7 52 aa7.37□□□□□ -1.23
SLC48A1-202ENST00000442892 SPANXB1Q9NS25 103 aaPredicted RBP7.37□□□□□ -1.23
SLC48A1-202ENST00000442892 PRYO14603 147 aa7.36□□□□□ -1.23
SLC48A1-202ENST00000442892 EIF4EBP3O60516 100 aaPredicted RBP7.36□□□□□ -1.23
SLC48A1-202ENST00000442892 COX8AP10176 69 aa7.36□□□□□ -1.23
SLC48A1-202ENST00000442892 PRR26Q8N8Z3 221 aa7.36□□□□□ -1.23
SLC48A1-202ENST00000442892 LITAFQ99732 161 aa7.36□□□□□ -1.23
SLC48A1-202ENST00000442892 LOC107984156A0A0G2JMH3 177 aa7.35□□□□□ -1.23
SLC48A1-202ENST00000442892 ETDCA0A1B0GVM5 59 aa7.35□□□□□ -1.23
SLC48A1-202ENST00000442892 ARL17AQ8IVW1 177 aa7.35□□□□□ -1.23
SLC48A1-202ENST00000442892 C14orf144Q96I85 54 aa7.35□□□□□ -1.23
SLC48A1-202ENST00000442892 C12orf57Q99622 126 aa7.35□□□□□ -1.23
SLC48A1-202ENST00000442892 HIGD2AQ9BW72 106 aa7.35□□□□□ -1.23
SLC48A1-202ENST00000442892 DLEU1O43261 78 aa7.34□□□□□ -1.23
SLC48A1-202ENST00000442892 NDUFC2O95298 119 aa7.34□□□□□ -1.23
SLC48A1-202ENST00000442892 LINC00518Q8N0U6 118 aa7.34□□□□□ -1.23
SLC48A1-202ENST00000442892 OR13C6PQ8NH95 151 aa7.34□□□□□ -1.23
SLC48A1-202ENST00000442892 TNXBP22105 4242 aa7.34□□□□□ -1.23
SLC48A1-202ENST00000442892 TRBV10-2A0A0K0K1G8 114 aa7.33□□□□□ -1.24
SLC48A1-202ENST00000442892 SLC25A34Q6PIV7 304 aa7.33□□□□□ -1.24
SLC48A1-202ENST00000442892 KRTAP13-1Q8IUC0 172 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 213.8 ms