RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 LINC00158P58513 81 aa6.9□□□□□ -1.3
TTC28-203ENST00000442232 KRTAP13-2Q52LG2 175 aa6.9□□□□□ -1.3
TTC28-203ENST00000442232 CBLN2Q8IUK8 224 aa6.9□□□□□ -1.3
TTC28-203ENST00000442232 APOC3P02656 99 aa6.89□□□□□ -1.31
TTC28-203ENST00000442232 URB1-AS1Q96HZ7 61 aa6.89□□□□□ -1.31
TTC28-203ENST00000442232 SNAPINO95295 136 aa6.88□□□□□ -1.31
TTC28-203ENST00000442232 SVBPQ8N300 66 aa6.88□□□□□ -1.31
TTC28-203ENST00000442232 HIGD2AQ9BW72 106 aa6.88□□□□□ -1.31
TTC28-203ENST00000442232 M0R378 163 aa6.87□□□□□ -1.31
TTC28-203ENST00000442232 MEIG1Q5JSS6 88 aa6.87□□□□□ -1.31
TTC28-203ENST00000442232 RETNLBQ9BQ08 111 aa6.87□□□□□ -1.31
TTC28-203ENST00000442232 ZNF706Q9Y5V0 76 aaPredicted RBP6.87□□□□□ -1.31
TTC28-203ENST00000442232 TRAV12-1A0A0B4J245 112 aa6.86□□□□□ -1.31
TTC28-203ENST00000442232 A0A0U1RRA0 63 aa6.86□□□□□ -1.31
TTC28-203ENST00000442232 CTAG1AP78358 180 aa6.86□□□□□ -1.31
TTC28-203ENST00000442232 CHCHD1Q96BP2 118 aaKnown RBP6.86□□□□□ -1.31
TTC28-203ENST00000442232 TMEM223A0PJW6 202 aa6.85□□□□□ -1.31
TTC28-203ENST00000442232 S100A12P80511 92 aa6.85□□□□□ -1.31
TTC28-203ENST00000442232 IFI27L1Q96BM0 104 aa6.85□□□□□ -1.31
TTC28-203ENST00000442232 PLEKHB2Q96CS7 222 aa6.85□□□□□ -1.31
TTC28-203ENST00000442232 LINC00587B1AMM8 73 aa6.84□□□□□ -1.31
TTC28-203ENST00000442232 PRYO14603 147 aa6.84□□□□□ -1.31
TTC28-203ENST00000442232 HERV-K104P63124 156 aa6.84□□□□□ -1.31
TTC28-203ENST00000442232 Q8NDZ9 215 aa6.84□□□□□ -1.31
TTC28-203ENST00000442232 CDIP1Q9H305 208 aa6.84□□□□□ -1.31
TTC28-203ENST00000442232 SMIM13P0DJ93 91 aa6.83□□□□□ -1.32
TTC28-203ENST00000442232 C4orf48Q5BLP8 95 aa6.83□□□□□ -1.32
TTC28-203ENST00000442232 BOD1L2Q8IYS8 172 aa6.83□□□□□ -1.32
TTC28-203ENST00000442232 MAP1LC3CQ9BXW4 147 aa6.83□□□□□ -1.32
TTC28-203ENST00000442232 IGLV7-46A0A075B6I9 117 aa6.82□□□□□ -1.32
TTC28-203ENST00000442232 ETDCA0A1B0GVM5 59 aa6.82□□□□□ -1.32
TTC28-203ENST00000442232 NCR3O14931 201 aa6.82□□□□□ -1.32
TTC28-203ENST00000442232 HSBP1O75506 76 aa6.82□□□□□ -1.32
TTC28-203ENST00000442232 SPAG11AQ6PDA7 123 aa6.82□□□□□ -1.32
TTC28-203ENST00000442232 C3orf22Q8N5N4 141 aa6.82□□□□□ -1.32
TTC28-203ENST00000442232 SPRR4Q96PI1 79 aa6.82□□□□□ -1.32
TTC28-203ENST00000442232 MYMXA0A1B0GTQ4 84 aa6.81□□□□□ -1.32
TTC28-203ENST00000442232 H0Y8G0 127 aa6.81□□□□□ -1.32
TTC28-203ENST00000442232 TPRXLQ17RH7 258 aa6.81□□□□□ -1.32
TTC28-203ENST00000442232 MIR7-3HGQ8N6C7 128 aa6.81□□□□□ -1.32
TTC28-203ENST00000442232 NDUFA12Q9UI09 145 aa6.8□□□□□ -1.32
TTC28-203ENST00000442232 MUC2Q02817 5179 aa6.8□□□□□ -1.32
TTC28-203ENST00000442232 LINC00337Q8N6G1 96 aa6.79□□□□□ -1.32
TTC28-203ENST00000442232 FAM19A2Q8N3H0 131 aa6.78□□□□□ -1.32
TTC28-203ENST00000442232 TRBV10-3A0A0K0K1G6 114 aa6.77□□□□□ -1.33
TTC28-203ENST00000442232 LEPROTL1O95214 131 aa6.77□□□□□ -1.33
TTC28-203ENST00000442232 HERVK_113P61574 105 aa6.77□□□□□ -1.33
TTC28-203ENST00000442232 MIEN1Q9BRT3 115 aa6.77□□□□□ -1.33
TTC28-203ENST00000442232 PPDPFQ9H3Y8 114 aa6.77□□□□□ -1.33
TTC28-203ENST00000442232 KCNQ1DNQ9H478 68 aa6.77□□□□□ -1.33
TTC28-203ENST00000442232 PLNP26678 52 aa6.76□□□□□ -1.33
TTC28-203ENST00000442232 FP248Q71RG6 208 aaPredicted RBP6.76□□□□□ -1.33
TTC28-203ENST00000442232 Q8NBF4 154 aa6.76□□□□□ -1.33
TTC28-203ENST00000442232 SMCR5Q8TEV8 140 aa6.76□□□□□ -1.33
TTC28-203ENST00000442232 YPEL4Q96NS1 127 aa6.76□□□□□ -1.33
TTC28-203ENST00000442232 LEPROTO15243 131 aa6.75□□□□□ -1.33
TTC28-203ENST00000442232 SPRR1AP35321 89 aa6.75□□□□□ -1.33
TTC28-203ENST00000442232 HSPB8Q9UJY1 196 aa6.75□□□□□ -1.33
TTC28-203ENST00000442232 LGALS3P17931 250 aaKnown RBP6.74□□□□□ -1.33
TTC28-203ENST00000442232 DDTP30046 118 aa6.74□□□□□ -1.33
TTC28-203ENST00000442232 DAND5Q8N907 189 aa6.74□□□□□ -1.33
TTC28-203ENST00000442232 TRBV10-2A0A0K0K1G8 114 aa6.73□□□□□ -1.33
TTC28-203ENST00000442232 J3QQQ9 107 aa6.73□□□□□ -1.33
TTC28-203ENST00000442232 DPM2O94777 84 aa6.73□□□□□ -1.33
TTC28-203ENST00000442232 SPINK1P00995 79 aa6.73□□□□□ -1.33
TTC28-203ENST00000442232 NMUP48645 174 aa6.73□□□□□ -1.33
TTC28-203ENST00000442232 S100A7L2Q5SY68 101 aa6.73□□□□□ -1.33
TTC28-203ENST00000442232 GAGE2AQ6NT46 116 aa6.73□□□□□ -1.33
TTC28-203ENST00000442232 SPANXB1Q9NS25 103 aaPredicted RBP6.73□□□□□ -1.33
TTC28-203ENST00000442232 IGLV9-49A0A0B4J1Y8 123 aa6.72□□□□□ -1.33
TTC28-203ENST00000442232 KRTAP4-16G5E9R7 235 aaPredicted RBP6.72□□□□□ -1.33
TTC28-203ENST00000442232 SERF1AO75920 110 aa6.72□□□□□ -1.33
TTC28-203ENST00000442232 TRGC2P03986 189 aa6.72□□□□□ -1.33
TTC28-203ENST00000442232 TSPEAR-AS2P59090 65 aa6.72□□□□□ -1.33
TTC28-203ENST00000442232 B5MCH6 92 aa6.71□□□□□ -1.34
TTC28-203ENST00000442232 IGKCP01834 107 aa6.71□□□□□ -1.34
TTC28-203ENST00000442232 MOBPQ13875 183 aa6.71□□□□□ -1.34
TTC28-203ENST00000442232 JOSD1Q15040 202 aaPredicted RBP6.71□□□□□ -1.34
TTC28-203ENST00000442232 LINC00483Q53H64 154 aa6.71□□□□□ -1.34
TTC28-203ENST00000442232 LOC107984156A0A0G2JMH3 177 aa6.7□□□□□ -1.34
TTC28-203ENST00000442232 FABP4P15090 132 aa6.7□□□□□ -1.34
TTC28-203ENST00000442232 ARL17AQ8IVW1 177 aa6.7□□□□□ -1.34
TTC28-203ENST00000442232 NDUFC2O95298 119 aa6.69□□□□□ -1.34
TTC28-203ENST00000442232 Q6ZRX8 168 aa6.69□□□□□ -1.34
TTC28-203ENST00000442232 CBY1Q9Y3M2 126 aa6.69□□□□□ -1.34
TTC28-203ENST00000442232 MUC17Q685J3 4493 aa6.69□□□□□ -1.34
TTC28-203ENST00000442232 TRAV23DV6A0A075B6W5 121 aa6.68□□□□□ -1.34
TTC28-203ENST00000442232 C9orf153Q5TBE3 101 aa6.68□□□□□ -1.34
TTC28-203ENST00000442232 SSBP3-AS1Q7Z2R9 100 aa6.68□□□□□ -1.34
TTC28-203ENST00000442232 PMCHL2Q9BQD1 86 aa6.68□□□□□ -1.34
TTC28-203ENST00000442232 HINT1P49773 126 aaPredicted RBP6.67□□□□□ -1.34
TTC28-203ENST00000442232 RPS29P62273 56 aaKnown RBP6.67□□□□□ -1.34
TTC28-203ENST00000442232 ERC2-IT1O76042 136 aa6.66□□□□□ -1.34
TTC28-203ENST00000442232 IGLV6-57P01721 117 aa6.66□□□□□ -1.34
TTC28-203ENST00000442232 LINC00310P59036 64 aa6.66□□□□□ -1.34
TTC28-203ENST00000442232 NPC2P61916 151 aa6.66□□□□□ -1.34
TTC28-203ENST00000442232 KRTAP13-3Q3SY46 172 aa6.66□□□□□ -1.34
TTC28-203ENST00000442232 Q9BRP9 147 aa6.66□□□□□ -1.34
TTC28-203ENST00000442232 SLC25A20O43772 301 aa6.65□□□□□ -1.34
TTC28-203ENST00000442232 ZNF73O43830 326 aaPredicted RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms