RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 S100A7L2Q5SY68 101 aa11.24□□□□□ -0.61
SEMA3B-207ENST00000441915 Q5XG85 94 aa11.24□□□□□ -0.61
SEMA3B-207ENST00000441915 HRCT1Q6UXD1 115 aa11.23□□□□□ -0.61
SEMA3B-207ENST00000441915 CELA1Q9UNI1 258 aa11.23□□□□□ -0.61
SEMA3B-207ENST00000441915 MIFP14174 115 aa11.23□□□□□ -0.61
SEMA3B-207ENST00000441915 C6orf99Q4VX62 202 aa11.23□□□□□ -0.61
SEMA3B-207ENST00000441915 SPAG11BQ08648 103 aa11.22□□□□□ -0.61
SEMA3B-207ENST00000441915 Q8NAQ8 132 aa11.22□□□□□ -0.61
SEMA3B-207ENST00000441915 LELP1Q5T871 98 aa11.22□□□□□ -0.61
SEMA3B-207ENST00000441915 SPART-AS1P0CW21 52 aa11.21□□□□□ -0.61
SEMA3B-207ENST00000441915 HTN3P15516 51 aa11.21□□□□□ -0.61
SEMA3B-207ENST00000441915 MUC7Q8TAX7 377 aa11.21□□□□□ -0.61
SEMA3B-207ENST00000441915 UNQ6190/PRO20217Q6UXQ8 127 aa11.21□□□□□ -0.62
SEMA3B-207ENST00000441915 Q8NDZ9 215 aa11.21□□□□□ -0.62
SEMA3B-207ENST00000441915 C6orf223Q8N319 242 aa11.2□□□□□ -0.62
SEMA3B-207ENST00000441915 C10orf25Q5T742 122 aa11.2□□□□□ -0.62
SEMA3B-207ENST00000441915 A0A087WVE0 104 aa11.18□□□□□ -0.62
SEMA3B-207ENST00000441915 A0A0J9YWU9 116 aa11.18□□□□□ -0.62
SEMA3B-207ENST00000441915 CYSRT1A8MQ03 144 aa11.18□□□□□ -0.62
SEMA3B-207ENST00000441915 USP17L23D6RBM5 183 aa11.18□□□□□ -0.62
SEMA3B-207ENST00000441915 IGHV4-30-4P0DP06 118 aa11.18□□□□□ -0.62
SEMA3B-207ENST00000441915 MRAPQ8TCY5 172 aa11.18□□□□□ -0.62
SEMA3B-207ENST00000441915 KLK12Q9UKR0 248 aa11.18□□□□□ -0.62
SEMA3B-207ENST00000441915 LINC00575Q6W349 94 aa11.17□□□□□ -0.62
SEMA3B-207ENST00000441915 PRR34Q9NV39 138 aa11.17□□□□□ -0.62
SEMA3B-207ENST00000441915 NOTCH2Q04721 2471 aa11.16□□□□□ -0.62
SEMA3B-207ENST00000441915 INAFM1C9JVW0 142 aa11.15□□□□□ -0.62
SEMA3B-207ENST00000441915 ENHOQ6UWT2 76 aa11.13□□□□□ -0.63
SEMA3B-207ENST00000441915 TENM1Q9UKZ4 2725 aa11.13□□□□□ -0.63
SEMA3B-207ENST00000441915 IGLV6-57P01721 117 aa11.13□□□□□ -0.63
SEMA3B-207ENST00000441915 ATP5EP2Q5VTU8 51 aa11.12□□□□□ -0.63
SEMA3B-207ENST00000441915 GVQW2A0A096LPI5 108 aaPredicted RBP11.12□□□□□ -0.63
SEMA3B-207ENST00000441915 TRRAPQ9Y4A5 3859 aa11.11□□□□□ -0.63
SEMA3B-207ENST00000441915 RBM3P98179 157 aaKnown RBP11.11□□□□□ -0.63
SEMA3B-207ENST00000441915 NDUFC2-KCTD14E9PQ53 114 aa11.11□□□□□ -0.63
SEMA3B-207ENST00000441915 UBL5Q9BZL1 73 aa11.11□□□□□ -0.63
SEMA3B-207ENST00000441915 ZNF561-AS1K7EIQ3 104 aa11.1□□□□□ -0.63
SEMA3B-207ENST00000441915 LYPD5Q6UWN5 251 aa11.1□□□□□ -0.63
SEMA3B-207ENST00000441915 LAMTOR3Q9UHA4 124 aa11.1□□□□□ -0.63
SEMA3B-207ENST00000441915 NSD1Q96L73 2696 aaPredicted RBP11.09□□□□□ -0.63
SEMA3B-207ENST00000441915 C6orf48Q9UBA6 75 aa11.09□□□□□ -0.63
SEMA3B-207ENST00000441915 OTOGQ6ZRI0 2925 aa11.08□□□□□ -0.64
SEMA3B-207ENST00000441915 XAGE1AQ9HD64 81 aa11.08□□□□□ -0.64
SEMA3B-207ENST00000441915 ATRQ13535 2644 aa11.07□□□□□ -0.64
SEMA3B-207ENST00000441915 Q6ZQT0 140 aa11.07□□□□□ -0.64
SEMA3B-207ENST00000441915 HECTD1Q9ULT8 2610 aa11.07□□□□□ -0.64
SEMA3B-207ENST00000441915 TRAV23DV6A0A075B6W5 121 aa11.07□□□□□ -0.64
SEMA3B-207ENST00000441915 TRBV10-3A0A0K0K1G6 114 aa11.07□□□□□ -0.64
SEMA3B-207ENST00000441915 Q6ZQY7 126 aa11.07□□□□□ -0.64
SEMA3B-207ENST00000441915 WFDC9Q8NEX5 89 aa11.07□□□□□ -0.64
SEMA3B-207ENST00000441915 GHRHP01286 108 aa11.06□□□□□ -0.64
SEMA3B-207ENST00000441915 DIRC1Q969H9 104 aa11.06□□□□□ -0.64
SEMA3B-207ENST00000441915 LOC110117498A0A087WWA1 95 aa11.05□□□□□ -0.64
SEMA3B-207ENST00000441915 H3BQ85 93 aa11.05□□□□□ -0.64
SEMA3B-207ENST00000441915 PRO0628Q9UI54 55 aa11.04□□□□□ -0.64
SEMA3B-207ENST00000441915 TEP1Q99973 2627 aaKnown RBP11.04□□□□□ -0.64
SEMA3B-207ENST00000441915 HIVEP1P15822 2718 aa11.04□□□□□ -0.64
SEMA3B-207ENST00000441915 CAMK2N2Q96S95 79 aa11.03□□□□□ -0.64
SEMA3B-207ENST00000441915 KMT2BQ9UMN6 2715 aaPredicted RBP11.02□□□□□ -0.64
SEMA3B-207ENST00000441915 FAM236DA0A1B0GTK5 79 aa11.02□□□□□ -0.64
SEMA3B-207ENST00000441915 FAM236CP0DP71 79 aa11.02□□□□□ -0.64
SEMA3B-207ENST00000441915 FAM19A1Q7Z5A9 133 aa11.02□□□□□ -0.64
SEMA3B-207ENST00000441915 WFDC10BQ8IUB3 73 aa11.02□□□□□ -0.64
SEMA3B-207ENST00000441915 ZNF73O43830 326 aaPredicted RBP11.02□□□□□ -0.65
SEMA3B-207ENST00000441915 HIGD2BQ4VC39 106 aa11.02□□□□□ -0.65
SEMA3B-207ENST00000441915 EPM2AB3EWF7 344 aa11.01□□□□□ -0.65
SEMA3B-207ENST00000441915 PDE6GP18545 87 aa11.01□□□□□ -0.65
SEMA3B-207ENST00000441915 KPRPQ5T749 579 aaPredicted RBP11.01□□□□□ -0.65
SEMA3B-207ENST00000441915 LINC00336Q6ZUF6 198 aa11.01□□□□□ -0.65
SEMA3B-207ENST00000441915 C20orf197Q8N268 126 aa11.01□□□□□ -0.65
SEMA3B-207ENST00000441915 H3BNG1 76 aa11□□□□□ -0.65
SEMA3B-207ENST00000441915 COX7BP24311 80 aa11□□□□□ -0.65
SEMA3B-207ENST00000441915 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11□□□□□ -0.65
SEMA3B-207ENST00000441915 SERP1Q9Y6X1 66 aa11□□□□□ -0.65
SEMA3B-207ENST00000441915 EGFEM1PQ0D2K5 195 aa10.99□□□□□ -0.65
SEMA3B-207ENST00000441915 M0R2N4 97 aa10.98□□□□□ -0.65
SEMA3B-207ENST00000441915 ELOF1P60002 83 aaKnown RBP10.98□□□□□ -0.65
SEMA3B-207ENST00000441915 VPREB1P12018 145 aa10.97□□□□□ -0.65
SEMA3B-207ENST00000441915 TRBV7-6A0A0J9YX20 115 aa10.97□□□□□ -0.65
SEMA3B-207ENST00000441915 KRTAP26-1Q6PEX3 210 aa10.96□□□□□ -0.65
SEMA3B-207ENST00000441915 Q6ZRU5 148 aa10.96□□□□□ -0.65
SEMA3B-207ENST00000441915 HAMPP81172 84 aa10.96□□□□□ -0.66
SEMA3B-207ENST00000441915 Q6ZTC4 211 aa10.96□□□□□ -0.66
SEMA3B-207ENST00000441915 RETNQ9HD89 108 aa10.96□□□□□ -0.66
SEMA3B-207ENST00000441915 LINC01547P58512 204 aaPredicted RBP10.95□□□□□ -0.66
SEMA3B-207ENST00000441915 Q6ZVQ6 151 aa10.95□□□□□ -0.66
SEMA3B-207ENST00000441915 M0R378 163 aa10.95□□□□□ -0.66
SEMA3B-207ENST00000441915 C1orf43Q9BWL3 253 aa10.95□□□□□ -0.66
SEMA3B-207ENST00000441915 H7BZZ5 65 aa10.94□□□□□ -0.66
SEMA3B-207ENST00000441915 C15orf56Q8N910 161 aa10.94□□□□□ -0.66
SEMA3B-207ENST00000441915 OXLD1Q5BKU9 147 aa10.93□□□□□ -0.66
SEMA3B-207ENST00000441915 TRBV7-4A0A0J9YYF1 115 aa10.92□□□□□ -0.66
SEMA3B-207ENST00000441915 ESRGQ1W209 222 aa10.92□□□□□ -0.66
SEMA3B-207ENST00000441915 F8WDY8 70 aa10.9□□□□□ -0.66
SEMA3B-207ENST00000441915 CXCL6P80162 114 aa10.9□□□□□ -0.66
SEMA3B-207ENST00000441915 TRAV7A0A075B6U4 112 aa10.89□□□□□ -0.67
SEMA3B-207ENST00000441915 SMIM26A0A096LP01 95 aa10.89□□□□□ -0.67
SEMA3B-207ENST00000441915 IGKV2D-24A0A075B6R9 120 aa10.89□□□□□ -0.67
SEMA3B-207ENST00000441915 LINC00528Q8N1L1 170 aa10.89□□□□□ -0.67
SEMA3B-207ENST00000441915 BCE1O60756 84 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms