RNA–Protein interactions for RNA: ENST00000436427.1

YBX1-203, Transcript of Y-box binding protein 1, humanhuman

TSL 1 (best)

Gene YBX1, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-203ENST00000436427 ERG28Q9UKR5 140 aa13.91□□□□□ -0.18
YBX1-203ENST00000436427 DNAH17Q9UFH2 4485 aa13.91□□□□□ -0.18
YBX1-203ENST00000436427 ADAMTSL4-AS1Q5T5F5 129 aa13.9□□□□□ -0.18
YBX1-203ENST00000436427 CNBPP62633 177 aaKnown RBP13.9□□□□□ -0.19
YBX1-203ENST00000436427 LINC00158P58513 81 aa13.88□□□□□ -0.19
YBX1-203ENST00000436427 TSPAN13O95857 204 aa13.87□□□□□ -0.19
YBX1-203ENST00000436427 PPDPFQ9H3Y8 114 aa13.87□□□□□ -0.19
YBX1-203ENST00000436427 COX17Q14061 63 aa13.85□□□□□ -0.19
YBX1-203ENST00000436427 DAND5Q8N907 189 aa13.85□□□□□ -0.19
YBX1-203ENST00000436427 RNF151Q2KHN1 245 aa13.85□□□□□ -0.19
YBX1-203ENST00000436427 LINC00308Q8TCZ7 52 aa13.85□□□□□ -0.19
YBX1-203ENST00000436427 LINC00336Q6ZUF6 198 aa13.84□□□□□ -0.19
YBX1-203ENST00000436427 FUSP35637 526 aaKnown RBP eCLIP13.83□□□□□ -0.2
YBX1-203ENST00000436427 NPC2P61916 151 aa13.83□□□□□ -0.2
YBX1-203ENST00000436427 MIR7-3HGQ8N6C7 128 aa13.83□□□□□ -0.2
YBX1-203ENST00000436427 LOC107984156A0A0G2JMH3 177 aa13.81□□□□□ -0.2
YBX1-203ENST00000436427 NDUFC2-KCTD14E9PQ53 114 aa13.81□□□□□ -0.2
YBX1-203ENST00000436427 RPL18AQ02543 176 aaKnown RBP13.81□□□□□ -0.2
YBX1-203ENST00000436427 Q1RN00 199 aa13.81□□□□□ -0.2
YBX1-203ENST00000436427 ARL17AQ8IVW1 177 aa13.81□□□□□ -0.2
YBX1-203ENST00000436427 IGLV5-52A0A0A0MRZ9 124 aa13.8□□□□□ -0.2
YBX1-203ENST00000436427 C9orf163Q8N9P6 203 aa13.8□□□□□ -0.2
YBX1-203ENST00000436427 FAT2Q9NYQ8 4349 aa13.8□□□□□ -0.2
YBX1-203ENST00000436427 PSMB2P49721 201 aa13.8□□□□□ -0.2
YBX1-203ENST00000436427 LINC01620Q4KN68 170 aa13.8□□□□□ -0.2
YBX1-203ENST00000436427 Q6ZRP5 223 aa13.79□□□□□ -0.2
YBX1-203ENST00000436427 LOC107984640A0A0U1RRK4 108 aa13.78□□□□□ -0.2
YBX1-203ENST00000436427 TLX1NBP0CAT3 122 aa13.78□□□□□ -0.2
YBX1-203ENST00000436427 GAGE2EQ4V326 116 aa13.78□□□□□ -0.2
YBX1-203ENST00000436427 GAGE2DQ9UEU5 116 aa13.78□□□□□ -0.2
YBX1-203ENST00000436427 TRBV20-1A0A075B6N2 111 aa13.77□□□□□ -0.21
YBX1-203ENST00000436427 SCGB1C2P0DMR2 95 aa13.77□□□□□ -0.21
YBX1-203ENST00000436427 KRTAP10-2P60368 255 aa13.77□□□□□ -0.21
YBX1-203ENST00000436427 SND1-IT1Q9HBX3 110 aa13.76□□□□□ -0.21
YBX1-203ENST00000436427 RYR3Q15413 4870 aa13.76□□□□□ -0.21
YBX1-203ENST00000436427 H7C2G1 150 aa13.75□□□□□ -0.21
YBX1-203ENST00000436427 EIF4EBP3O60516 100 aaPredicted RBP13.75□□□□□ -0.21
YBX1-203ENST00000436427 GAGE2BQ13066 116 aa13.75□□□□□ -0.21
YBX1-203ENST00000436427 XAGE1AQ9HD64 81 aa13.74□□□□□ -0.21
YBX1-203ENST00000436427 HECTD4Q9Y4D8 3996 aa13.73□□□□□ -0.21
YBX1-203ENST00000436427 RPL13AP40429 203 aaKnown RBP13.73□□□□□ -0.21
YBX1-203ENST00000436427 PKIGQ9Y2B9 76 aa13.73□□□□□ -0.21
YBX1-203ENST00000436427 DNAH11Q96DT5 4516 aa13.72□□□□□ -0.21
YBX1-203ENST00000436427 F8W1H4 67 aa13.72□□□□□ -0.21
YBX1-203ENST00000436427 COX6CP09669 75 aa13.72□□□□□ -0.21
YBX1-203ENST00000436427 SOSTDC1Q6X4U4 206 aa13.72□□□□□ -0.21
YBX1-203ENST00000436427 IGKV2-24A0A0C4DH68 120 aa13.71□□□□□ -0.21
YBX1-203ENST00000436427 H3BMG7 143 aa13.71□□□□□ -0.21
YBX1-203ENST00000436427 A0A096LNI7 61 aa13.7□□□□□ -0.22
YBX1-203ENST00000436427 SDIM1Q6ZPB5 146 aa13.7□□□□□ -0.22
YBX1-203ENST00000436427 C16orf90A8MZG2 172 aa13.69□□□□□ -0.22
YBX1-203ENST00000436427 TRAV13-2A0A0B4J235 113 aa13.69□□□□□ -0.22
YBX1-203ENST00000436427 C9orf129Q5T035 196 aaKnown RBP13.69□□□□□ -0.22
YBX1-203ENST00000436427 PKD1P98161 4303 aa13.68□□□□□ -0.22
YBX1-203ENST00000436427 CHTF8P0CG12 524 aa13.66□□□□□ -0.22
YBX1-203ENST00000436427 A0A1B0GVY2 172 aa13.65□□□□□ -0.22
YBX1-203ENST00000436427 TRIAP1O43715 76 aa13.65□□□□□ -0.22
YBX1-203ENST00000436427 TCL1BO95988 128 aa13.65□□□□□ -0.22
YBX1-203ENST00000436427 ATXN8Q156A1 80 aa13.65□□□□□ -0.22
YBX1-203ENST00000436427 LINC00474Q9P2X8 69 aa13.63□□□□□ -0.23
YBX1-203ENST00000436427 DNAH5Q8TE73 4624 aa13.62□□□□□ -0.23
YBX1-203ENST00000436427 Q8NDZ9 215 aa13.62□□□□□ -0.23
YBX1-203ENST00000436427 FAM168BA1KXE4 195 aa13.61□□□□□ -0.23
YBX1-203ENST00000436427 DPH3Q96FX2 82 aa13.61□□□□□ -0.23
YBX1-203ENST00000436427 PANO1I0J062 215 aa13.6□□□□□ -0.23
YBX1-203ENST00000436427 K7ERU9 68 aa13.6□□□□□ -0.23
YBX1-203ENST00000436427 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.6□□□□□ -0.23
YBX1-203ENST00000436427 PRR3P79522 188 aaKnown RBP13.59□□□□□ -0.23
YBX1-203ENST00000436427 SERTAD4-AS1Q5TG53 156 aa13.59□□□□□ -0.23
YBX1-203ENST00000436427 NCR3O14931 201 aa13.59□□□□□ -0.23
YBX1-203ENST00000436427 NDUFC2O95298 119 aa13.59□□□□□ -0.23
YBX1-203ENST00000436427 OCIAD2Q56VL3 154 aa13.59□□□□□ -0.23
YBX1-203ENST00000436427 FAM19A5Q7Z5A7 132 aaPredicted RBP13.59□□□□□ -0.23
YBX1-203ENST00000436427 SPACA4Q8TDM5 124 aa13.59□□□□□ -0.23
YBX1-203ENST00000436427 PRO0461Q9UI25 63 aa13.59□□□□□ -0.23
YBX1-203ENST00000436427 VPREB1P12018 145 aa13.58□□□□□ -0.24
YBX1-203ENST00000436427 KRTAP10-1P60331 282 aa13.57□□□□□ -0.24
YBX1-203ENST00000436427 PLA2G2DQ9UNK4 145 aa13.57□□□□□ -0.24
YBX1-203ENST00000436427 NKAPP1Q8N9T2 125 aa13.56□□□□□ -0.24
YBX1-203ENST00000436427 IGKV2-28A0A075B6P5 120 aa13.55□□□□□ -0.24
YBX1-203ENST00000436427 A0A1W2PNN7 141 aa13.55□□□□□ -0.24
YBX1-203ENST00000436427 IGKV2D-28P01615 120 aa13.55□□□□□ -0.24
YBX1-203ENST00000436427 LINC00337Q8N6G1 96 aa13.54□□□□□ -0.24
YBX1-203ENST00000436427 RPL28P46779 137 aaKnown RBP13.54□□□□□ -0.24
YBX1-203ENST00000436427 KRTAP7-1Q8IUC3 87 aa13.54□□□□□ -0.24
YBX1-203ENST00000436427 MTURNQ8N3F0 131 aa13.54□□□□□ -0.24
YBX1-203ENST00000436427 C9JAW5 83 aa13.53□□□□□ -0.24
YBX1-203ENST00000436427 M0QXV9 152 aa13.53□□□□□ -0.24
YBX1-203ENST00000436427 LST1O00453 97 aa13.52□□□□□ -0.25
YBX1-203ENST00000436427 OR13C6PQ8NH95 151 aa13.52□□□□□ -0.25
YBX1-203ENST00000436427 IGLV5-37A0A075B6J1 123 aa13.51□□□□□ -0.25
YBX1-203ENST00000436427 A0A087WYN8 130 aa13.51□□□□□ -0.25
YBX1-203ENST00000436427 J3QR89 54 aa13.51□□□□□ -0.25
YBX1-203ENST00000436427 SLC25A20O43772 301 aa13.51□□□□□ -0.25
YBX1-203ENST00000436427 FAM30AQ9NZY2 134 aa13.51□□□□□ -0.25
YBX1-203ENST00000436427 C22orf24Q9Y442 160 aa13.51□□□□□ -0.25
YBX1-203ENST00000436427 PKHD1P08F94 4074 aa13.51□□□□□ -0.25
YBX1-203ENST00000436427 TRBV10-2A0A0K0K1G8 114 aa13.5□□□□□ -0.25
YBX1-203ENST00000436427 M0R378 163 aa13.5□□□□□ -0.25
YBX1-203ENST00000436427 ETDBQ3ZM63 59 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms