RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 C3orf22Q8N5N4 141 aa8.53□□□□□ -1.04
PRKDC-203ENST00000432581 FP248Q71RG6 208 aaPredicted RBP8.52□□□□□ -1.05
PRKDC-203ENST00000432581 SVBPQ8N300 66 aa8.52□□□□□ -1.05
PRKDC-203ENST00000432581 SMCO4Q9NRQ5 59 aa8.52□□□□□ -1.05
PRKDC-203ENST00000432581 SFTA2Q6UW10 78 aa8.51□□□□□ -1.05
PRKDC-203ENST00000432581 HIGD2AQ9BW72 106 aa8.51□□□□□ -1.05
PRKDC-203ENST00000432581 ZNF22P17026 224 aaPredicted RBP8.5□□□□□ -1.05
PRKDC-203ENST00000432581 SNAPINO95295 136 aa8.49□□□□□ -1.05
PRKDC-203ENST00000432581 S100PP25815 95 aa8.49□□□□□ -1.05
PRKDC-203ENST00000432581 COX19Q49B96 90 aa8.49□□□□□ -1.05
PRKDC-203ENST00000432581 C4orf48Q5BLP8 95 aa8.49□□□□□ -1.05
PRKDC-203ENST00000432581 ZNF706Q9Y5V0 76 aaPredicted RBP8.49□□□□□ -1.05
PRKDC-203ENST00000432581 NDUFA6P56556 154 aa8.48□□□□□ -1.05
PRKDC-203ENST00000432581 LINC00337Q8N6G1 96 aa8.48□□□□□ -1.05
PRKDC-203ENST00000432581 Q8NDZ9 215 aa8.48□□□□□ -1.05
PRKDC-203ENST00000432581 ZNF625Q96I27 306 aaPredicted RBP8.48□□□□□ -1.05
PRKDC-203ENST00000432581 SPRR4Q96PI1 79 aa8.48□□□□□ -1.05
PRKDC-203ENST00000432581 FABP9Q0Z7S8 132 aa8.46□□□□□ -1.06
PRKDC-203ENST00000432581 RHEBQ15382 184 aa8.46□□□□□ -1.06
PRKDC-203ENST00000432581 KRTAP13-3Q3SY46 172 aa8.44□□□□□ -1.06
PRKDC-203ENST00000432581 A0A096LNJ9 63 aa8.43□□□□□ -1.06
PRKDC-203ENST00000432581 LINC00158P58513 81 aa8.43□□□□□ -1.06
PRKDC-203ENST00000432581 ASB16-AS1Q495Z4 193 aa8.43□□□□□ -1.06
PRKDC-203ENST00000432581 TMEM170BQ5T4T1 132 aa8.43□□□□□ -1.06
PRKDC-203ENST00000432581 Q8NBF4 154 aa8.43□□□□□ -1.06
PRKDC-203ENST00000432581 C11orf86A6NJI1 115 aa8.42□□□□□ -1.06
PRKDC-203ENST00000432581 SPINK1P00995 79 aa8.42□□□□□ -1.06
PRKDC-203ENST00000432581 HBDP02042 147 aa8.42□□□□□ -1.06
PRKDC-203ENST00000432581 PRYO14603 147 aa8.41□□□□□ -1.06
PRKDC-203ENST00000432581 LINC00614P0C842 121 aa8.41□□□□□ -1.06
PRKDC-203ENST00000432581 LINC01547P58512 204 aaPredicted RBP8.41□□□□□ -1.06
PRKDC-203ENST00000432581 BAGE3Q86Y29 109 aa8.41□□□□□ -1.06
PRKDC-203ENST00000432581 DAND5Q8N907 189 aa8.41□□□□□ -1.06
PRKDC-203ENST00000432581 RPS10P5Q9NQ39 176 aa8.41□□□□□ -1.06
PRKDC-203ENST00000432581 SEC61BP60468 96 aaKnown RBP8.39□□□□□ -1.07
PRKDC-203ENST00000432581 URB1-AS1Q96HZ7 61 aa8.39□□□□□ -1.07
PRKDC-203ENST00000432581 A0A0U1RRA0 63 aa8.38□□□□□ -1.07
PRKDC-203ENST00000432581 SPRR1AP35321 89 aa8.38□□□□□ -1.07
PRKDC-203ENST00000432581 C18orf32Q8TCD1 76 aa8.38□□□□□ -1.07
PRKDC-203ENST00000432581 SMCR5Q8TEV8 140 aa8.38□□□□□ -1.07
PRKDC-203ENST00000432581 KCNQ1DNQ9H478 68 aa8.38□□□□□ -1.07
PRKDC-203ENST00000432581 NDUFA12Q9UI09 145 aa8.38□□□□□ -1.07
PRKDC-203ENST00000432581 ETDCA0A1B0GVM5 59 aa8.37□□□□□ -1.07
PRKDC-203ENST00000432581 PMCHL1Q16048 86 aa8.37□□□□□ -1.07
PRKDC-203ENST00000432581 LINC00483Q53H64 154 aa8.37□□□□□ -1.07
PRKDC-203ENST00000432581 BOD1L2Q8IYS8 172 aa8.37□□□□□ -1.07
PRKDC-203ENST00000432581 FAM19A2Q8N3H0 131 aa8.36□□□□□ -1.07
PRKDC-203ENST00000432581 CHTOPQ9Y3Y2 248 aaKnown RBP8.36□□□□□ -1.07
PRKDC-203ENST00000432581 TMEM223A0PJW6 202 aa8.35□□□□□ -1.07
PRKDC-203ENST00000432581 KRTAP4-16G5E9R7 235 aaPredicted RBP8.35□□□□□ -1.07
PRKDC-203ENST00000432581 NCR3O14931 201 aa8.35□□□□□ -1.07
PRKDC-203ENST00000432581 SMIM13P0DJ93 91 aa8.35□□□□□ -1.07
PRKDC-203ENST00000432581 RPS29P62273 56 aaKnown RBP8.35□□□□□ -1.07
PRKDC-203ENST00000432581 S100A12P80511 92 aa8.35□□□□□ -1.07
PRKDC-203ENST00000432581 MEIG1Q5JSS6 88 aa8.34□□□□□ -1.07
PRKDC-203ENST00000432581 LCE2DQ5TA82 110 aaPredicted RBP8.34□□□□□ -1.07
PRKDC-203ENST00000432581 YPEL4Q96NS1 127 aa8.34□□□□□ -1.07
PRKDC-203ENST00000432581 TRAPPC1Q9Y5R8 145 aa8.34□□□□□ -1.07
PRKDC-203ENST00000432581 LINC00587B1AMM8 73 aa8.33□□□□□ -1.08
PRKDC-203ENST00000432581 HERV-K104P63124 156 aa8.33□□□□□ -1.08
PRKDC-203ENST00000432581 GAGE2AQ6NT46 116 aa8.33□□□□□ -1.08
PRKDC-203ENST00000432581 MIR7-3HGQ8N6C7 128 aa8.33□□□□□ -1.08
PRKDC-203ENST00000432581 KRTAP4-1Q9BYQ7 146 aa8.33□□□□□ -1.08
PRKDC-203ENST00000432581 TRAV12-1A0A0B4J245 112 aa8.32□□□□□ -1.08
PRKDC-203ENST00000432581 TRBV10-3A0A0K0K1G6 114 aa8.32□□□□□ -1.08
PRKDC-203ENST00000432581 SSBP3-AS1Q7Z2R9 100 aa8.32□□□□□ -1.08
PRKDC-203ENST00000432581 Q8N377 158 aa8.32□□□□□ -1.08
PRKDC-203ENST00000432581 COLCA2A8K830 154 aa8.31□□□□□ -1.08
PRKDC-203ENST00000432581 MOBPQ13875 183 aa8.31□□□□□ -1.08
PRKDC-203ENST00000432581 IGLV9-49A0A0B4J1Y8 123 aa8.3□□□□□ -1.08
PRKDC-203ENST00000432581 B5MCH6 92 aa8.3□□□□□ -1.08
PRKDC-203ENST00000432581 SLC25A20O43772 301 aa8.3□□□□□ -1.08
PRKDC-203ENST00000432581 MAP1LC3CQ9BXW4 147 aa8.3□□□□□ -1.08
PRKDC-203ENST00000432581 XP32Q5T750 250 aa8.28□□□□□ -1.08
PRKDC-203ENST00000432581 IFI27L1Q96BM0 104 aa8.28□□□□□ -1.08
PRKDC-203ENST00000432581 MYMXA0A1B0GTQ4 84 aa8.27□□□□□ -1.09
PRKDC-203ENST00000432581 ERC2-IT1O76042 136 aa8.27□□□□□ -1.09
PRKDC-203ENST00000432581 TRBV10-2A0A0K0K1G8 114 aa8.26□□□□□ -1.09
PRKDC-203ENST00000432581 DDTP30046 118 aa8.26□□□□□ -1.09
PRKDC-203ENST00000432581 CHCHD1Q96BP2 118 aaKnown RBP8.26□□□□□ -1.09
PRKDC-203ENST00000432581 LOC107984156A0A0G2JMH3 177 aa8.25□□□□□ -1.09
PRKDC-203ENST00000432581 Q6ZRX8 168 aa8.25□□□□□ -1.09
PRKDC-203ENST00000432581 ARL17AQ8IVW1 177 aa8.25□□□□□ -1.09
PRKDC-203ENST00000432581 Q9BRP9 147 aa8.25□□□□□ -1.09
PRKDC-203ENST00000432581 CRCT1Q9UGL9 99 aa8.23□□□□□ -1.09
PRKDC-203ENST00000432581 TMA7Q9Y2S6 64 aaKnown RBP8.23□□□□□ -1.09
PRKDC-203ENST00000432581 JOSD1Q15040 202 aaPredicted RBP8.22□□□□□ -1.09
PRKDC-203ENST00000432581 C9orf153Q5TBE3 101 aa8.22□□□□□ -1.09
PRKDC-203ENST00000432581 SPANXB1Q9NS25 103 aaPredicted RBP8.22□□□□□ -1.09
PRKDC-203ENST00000432581 IGLV6-57P01721 117 aa8.2□□□□□ -1.1
PRKDC-203ENST00000432581 MIEN1Q9BRT3 115 aa8.2□□□□□ -1.1
PRKDC-203ENST00000432581 LEPROTO15243 131 aa8.19□□□□□ -1.1
PRKDC-203ENST00000432581 S100A7L2Q5SY68 101 aa8.19□□□□□ -1.1
PRKDC-203ENST00000432581 LCE2CQ5TA81 110 aa8.19□□□□□ -1.1
PRKDC-203ENST00000432581 TRAV23DV6A0A075B6W5 121 aa8.18□□□□□ -1.1
PRKDC-203ENST00000432581 C5orf52A6NGY3 159 aa8.18□□□□□ -1.1
PRKDC-203ENST00000432581 NDUFC2O95298 119 aa8.18□□□□□ -1.1
PRKDC-203ENST00000432581 TSPEAR-AS2P59090 65 aa8.18□□□□□ -1.1
PRKDC-203ENST00000432581 HSBP1O75506 76 aa8.17□□□□□ -1.1
PRKDC-203ENST00000432581 TRGC2P03986 189 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms