RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 COX17Q14061 63 aa6.06□□□□□ -1.44
GABPB1-205ENST00000429662 C6orf226Q5I0X4 101 aa6.06□□□□□ -1.44
GABPB1-205ENST00000429662 LINC00337Q8N6G1 96 aa6.06□□□□□ -1.44
GABPB1-205ENST00000429662 MUC7Q8TAX7 377 aa6.06□□□□□ -1.44
GABPB1-205ENST00000429662 SMIM11BQ8TCY0 68 aa6.06□□□□□ -1.44
GABPB1-205ENST00000429662 LYRM9A8MSI8 78 aa6.05□□□□□ -1.44
GABPB1-205ENST00000429662 FAM218AQ96MZ4 157 aa6.05□□□□□ -1.44
GABPB1-205ENST00000429662 PRO0255Q9UI72 69 aa6.05□□□□□ -1.44
GABPB1-205ENST00000429662 B5MCH6 92 aa6.04□□□□□ -1.44
GABPB1-205ENST00000429662 NDUFC2O95298 119 aa6.04□□□□□ -1.44
GABPB1-205ENST00000429662 GYPEP15421 78 aa6.04□□□□□ -1.44
GABPB1-205ENST00000429662 OBSCN-AS1Q96MR7 158 aa6.04□□□□□ -1.44
GABPB1-205ENST00000429662 TMEM126AQ9H061 195 aa6.04□□□□□ -1.44
GABPB1-205ENST00000429662 IGKV3OR2-268A0A0C4DH90 116 aa6.03□□□□□ -1.44
GABPB1-205ENST00000429662 C5orf38Q86SI9 138 aa6.03□□□□□ -1.44
GABPB1-205ENST00000429662 WFDC10AQ9H1F0 79 aa6.03□□□□□ -1.44
GABPB1-205ENST00000429662 C22orf24Q9Y442 160 aa6.03□□□□□ -1.44
GABPB1-205ENST00000429662 PLECQ15149 4684 aaKnown RBP6.02□□□□□ -1.45
GABPB1-205ENST00000429662 KIAA1109Q2LD37 5005 aa6.02□□□□□ -1.45
GABPB1-205ENST00000429662 CCDC179H3BU77 68 aa6.02□□□□□ -1.45
GABPB1-205ENST00000429662 DEFB130BP0DP73 79 aa6.02□□□□□ -1.45
GABPB1-205ENST00000429662 DEFB130AP0DP74 79 aa6.02□□□□□ -1.45
GABPB1-205ENST00000429662 CD164L2Q6UWJ8 174 aa6.02□□□□□ -1.45
GABPB1-205ENST00000429662 LINC00167Q96N53 147 aa6.02□□□□□ -1.45
GABPB1-205ENST00000429662 ORMDL1Q9P0S3 153 aa6.02□□□□□ -1.45
GABPB1-205ENST00000429662 IGHV4-28A0A0C4DH34 117 aa6.01□□□□□ -1.45
GABPB1-205ENST00000429662 JMJD7-PLA2G4BH0Y9G9 81 aa6.01□□□□□ -1.45
GABPB1-205ENST00000429662 PFN2P35080 140 aa6.01□□□□□ -1.45
GABPB1-205ENST00000429662 S100A7L2Q5SY68 101 aa6.01□□□□□ -1.45
GABPB1-205ENST00000429662 C9orf66Q5T8R8 295 aa6.01□□□□□ -1.45
GABPB1-205ENST00000429662 GAGE2AQ6NT46 116 aa6.01□□□□□ -1.45
GABPB1-205ENST00000429662 CFAP161Q6P656 301 aa6.01□□□□□ -1.45
GABPB1-205ENST00000429662 LINC00482Q8N8I6 264 aa6.01□□□□□ -1.45
GABPB1-205ENST00000429662 OR13C6PQ8NH95 151 aa6.01□□□□□ -1.45
GABPB1-205ENST00000429662 KRTAP4-11Q9BYQ6 195 aa6.01□□□□□ -1.45
GABPB1-205ENST00000429662 Q9HAA7 133 aa6.01□□□□□ -1.45
GABPB1-205ENST00000429662 KLK5Q9Y337 293 aaPredicted RBP6.01□□□□□ -1.45
GABPB1-205ENST00000429662 A0A087WYN8 130 aa6□□□□□ -1.45
GABPB1-205ENST00000429662 FAM236AA0A1B0GUQ0 79 aa6□□□□□ -1.45
GABPB1-205ENST00000429662 FAM236BA0A1B0GV22 79 aa6□□□□□ -1.45
GABPB1-205ENST00000429662 KRTAP9-7A8MTY7 169 aa6□□□□□ -1.45
GABPB1-205ENST00000429662 H3BQ85 93 aa6□□□□□ -1.45
GABPB1-205ENST00000429662 Q6JHZ5 121 aa6□□□□□ -1.45
GABPB1-205ENST00000429662 MRAPQ8TCY5 172 aa6□□□□□ -1.45
GABPB1-205ENST00000429662 SMCR5Q8TEV8 140 aa6□□□□□ -1.45
GABPB1-205ENST00000429662 X6R8D5 127 aa6□□□□□ -1.45
GABPB1-205ENST00000429662 TMEM256-PLSCR3K7ERE1 68 aa5.99□□□□□ -1.45
GABPB1-205ENST00000429662 UQCRQO14949 82 aa5.99□□□□□ -1.45
GABPB1-205ENST00000429662 LECT2O14960 151 aa5.99□□□□□ -1.45
GABPB1-205ENST00000429662 XCL1P47992 114 aa5.99□□□□□ -1.45
GABPB1-205ENST00000429662 APOC4P55056 127 aa5.99□□□□□ -1.45
GABPB1-205ENST00000429662 WWC2-AS2Q96NR7 200 aa5.99□□□□□ -1.45
GABPB1-205ENST00000429662 SS18L2Q9UHA2 77 aa5.99□□□□□ -1.45
GABPB1-205ENST00000429662 ABCA13Q86UQ4 5058 aa5.98□□□□□ -1.45
GABPB1-205ENST00000429662 ATOX1O00244 68 aa5.98□□□□□ -1.45
GABPB1-205ENST00000429662 C3orf22Q8N5N4 141 aa5.98□□□□□ -1.45
GABPB1-205ENST00000429662 KIAA0087Q14695 138 aa5.97□□□□□ -1.45
GABPB1-205ENST00000429662 SVIPQ8NHG7 77 aa5.97□□□□□ -1.45
GABPB1-205ENST00000429662 K7EIL1 84 aa5.96□□□□□ -1.45
GABPB1-205ENST00000429662 CCKP06307 115 aa5.96□□□□□ -1.45
GABPB1-205ENST00000429662 HIST1H4AP62805 103 aaKnown RBP5.96□□□□□ -1.45
GABPB1-205ENST00000429662 ATP5EP2Q5VTU8 51 aa5.96□□□□□ -1.45
GABPB1-205ENST00000429662 Q8N814 137 aa5.96□□□□□ -1.45
GABPB1-205ENST00000429662 CHCHD10Q8WYQ3 142 aaPredicted RBP5.96□□□□□ -1.45
GABPB1-205ENST00000429662 LINC00526Q96FQ7 95 aa5.96□□□□□ -1.45
GABPB1-205ENST00000429662 MIFP14174 115 aa5.95□□□□□ -1.46
GABPB1-205ENST00000429662 DAD1P61803 113 aa5.95□□□□□ -1.46
GABPB1-205ENST00000429662 REG3AQ06141 175 aa5.95□□□□□ -1.46
GABPB1-205ENST00000429662 C14orf132Q9NPU4 83 aa5.95□□□□□ -1.46
GABPB1-205ENST00000429662 COX7CP15954 63 aa5.94□□□□□ -1.46
GABPB1-205ENST00000429662 LELP1Q5T871 98 aa5.94□□□□□ -1.46
GABPB1-205ENST00000429662 LINC00269Q8N2A0 174 aa5.94□□□□□ -1.46
GABPB1-205ENST00000429662 HECTD4Q9Y4D8 3996 aa5.94□□□□□ -1.46
GABPB1-205ENST00000429662 A0A0J9YWU9 116 aa5.93□□□□□ -1.46
GABPB1-205ENST00000429662 ANGP03950 147 aaKnown RBP5.93□□□□□ -1.46
GABPB1-205ENST00000429662 SPART-AS1P0CW21 52 aa5.93□□□□□ -1.46
GABPB1-205ENST00000429662 IGHV4-30-4P0DP06 118 aa5.93□□□□□ -1.46
GABPB1-205ENST00000429662 RPL18AQ02543 176 aaKnown RBP5.93□□□□□ -1.46
GABPB1-205ENST00000429662 C9orf153Q5TBE3 101 aa5.93□□□□□ -1.46
GABPB1-205ENST00000429662 C11orf68Q9H3H3 251 aaKnown RBP5.93□□□□□ -1.46
GABPB1-205ENST00000429662 GVQW2A0A096LPI5 108 aaPredicted RBP5.93□□□□□ -1.46
GABPB1-205ENST00000429662 TRBV10-3A0A0K0K1G6 114 aa5.93□□□□□ -1.46
GABPB1-205ENST00000429662 NANOS2P60321 138 aaKnown RBP5.93□□□□□ -1.46
GABPB1-205ENST00000429662 LINC00846Q9NV44 126 aa5.93□□□□□ -1.46
GABPB1-205ENST00000429662 LCE6AA0A183 80 aa5.92□□□□□ -1.46
GABPB1-205ENST00000429662 NCR3O14931 201 aa5.92□□□□□ -1.46
GABPB1-205ENST00000429662 CRYGAP11844 174 aa5.92□□□□□ -1.46
GABPB1-205ENST00000429662 PDE6GP18545 87 aa5.92□□□□□ -1.46
GABPB1-205ENST00000429662 ALMS1Q8TCU4 4167 aa5.92□□□□□ -1.46
GABPB1-205ENST00000429662 SLPIP03973 132 aa5.91□□□□□ -1.46
GABPB1-205ENST00000429662 SPAG11BQ08648 103 aa5.91□□□□□ -1.46
GABPB1-205ENST00000429662 CLPSL2Q6UWE3 100 aa5.91□□□□□ -1.46
GABPB1-205ENST00000429662 LYPD5Q6UWN5 251 aa5.91□□□□□ -1.46
GABPB1-205ENST00000429662 LINC00575Q6W349 94 aa5.91□□□□□ -1.46
GABPB1-205ENST00000429662 KRTAP4-5Q9BYR2 181 aa5.91□□□□□ -1.46
GABPB1-205ENST00000429662 PRR34Q9NV39 138 aa5.91□□□□□ -1.46
GABPB1-205ENST00000429662 A0A096LPF7 62 aa5.9□□□□□ -1.47
GABPB1-205ENST00000429662 hADV29S1A0JD25 119 aa5.9□□□□□ -1.47
GABPB1-205ENST00000429662 ZNF561-AS1K7EIQ3 104 aa5.9□□□□□ -1.47
GABPB1-205ENST00000429662 BCE1O60756 84 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms