RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 BRCA2P51587 3418 aa3.7□□□□□ -1.82
VTI1BP4-201ENST00000427516 SZT2Q5T011 3432 aa3.7□□□□□ -1.82
VTI1BP4-201ENST00000427516 IGKV2D-24A0A075B6R9 120 aa3.7□□□□□ -1.82
VTI1BP4-201ENST00000427516 DEFB112Q30KQ8 113 aa3.7□□□□□ -1.82
VTI1BP4-201ENST00000427516 ODF3L2Q3SX64 289 aa3.7□□□□□ -1.82
VTI1BP4-201ENST00000427516 LINC00612Q8N6U2 182 aa3.7□□□□□ -1.82
VTI1BP4-201ENST00000427516 K7EQZ3 153 aa3.69□□□□□ -1.82
VTI1BP4-201ENST00000427516 DSCR10P59022 87 aa3.69□□□□□ -1.82
VTI1BP4-201ENST00000427516 PRR4Q16378 134 aa3.69□□□□□ -1.82
VTI1BP4-201ENST00000427516 UNQ6190/PRO20217Q6UXQ8 127 aa3.69□□□□□ -1.82
VTI1BP4-201ENST00000427516 C9orf163Q8N9P6 203 aa3.69□□□□□ -1.82
VTI1BP4-201ENST00000427516 CAMK2N2Q96S95 79 aa3.69□□□□□ -1.82
VTI1BP4-201ENST00000427516 DEFB131BA0A096LNP1 70 aa3.68□□□□□ -1.82
VTI1BP4-201ENST00000427516 PRB1P04280 392 aa3.68□□□□□ -1.82
VTI1BP4-201ENST00000427516 LINC00313P59037 77 aa3.68□□□□□ -1.82
VTI1BP4-201ENST00000427516 Q6ZRX8 168 aa3.68□□□□□ -1.82
VTI1BP4-201ENST00000427516 ST20-AS1Q8NBB2 130 aa3.68□□□□□ -1.82
VTI1BP4-201ENST00000427516 PLAC8Q9NZF1 115 aa3.68□□□□□ -1.82
VTI1BP4-201ENST00000427516 DOPEY2Q9Y3R5 2298 aa3.68□□□□□ -1.82
VTI1BP4-201ENST00000427516 XIRP2A4UGR9 3374 aa3.68□□□□□ -1.82
VTI1BP4-201ENST00000427516 A0A1W2PNM2 257 aa3.67□□□□□ -1.82
VTI1BP4-201ENST00000427516 LELP1Q5T871 98 aa3.67□□□□□ -1.82
VTI1BP4-201ENST00000427516 Q8N377 158 aa3.67□□□□□ -1.82
VTI1BP4-201ENST00000427516 Q8NAQ8 132 aa3.67□□□□□ -1.82
VTI1BP4-201ENST00000427516 DEFB124Q8NES8 71 aa3.67□□□□□ -1.82
VTI1BP4-201ENST00000427516 KRTAP17-1Q9BYP8 105 aa3.67□□□□□ -1.82
VTI1BP4-201ENST00000427516 PRR34Q9NV39 138 aa3.67□□□□□ -1.82
VTI1BP4-201ENST00000427516 ZZEF1O43149 2961 aa3.66□□□□□ -1.82
VTI1BP4-201ENST00000427516 CLPSL2Q6UWE3 100 aa3.66□□□□□ -1.82
VTI1BP4-201ENST00000427516 WFDC10BQ8IUB3 73 aa3.66□□□□□ -1.82
VTI1BP4-201ENST00000427516 DEFB105AQ8NG35 78 aa3.66□□□□□ -1.82
VTI1BP4-201ENST00000427516 ZNF702PQ9H963 129 aa3.66□□□□□ -1.82
VTI1BP4-201ENST00000427516 C6orf48Q9UBA6 75 aa3.66□□□□□ -1.82
VTI1BP4-201ENST00000427516 PTPRQQ9UMZ3 2332 aa3.66□□□□□ -1.82
VTI1BP4-201ENST00000427516 DNAH14Q0VDD8 3507 aa3.66□□□□□ -1.82
VTI1BP4-201ENST00000427516 MAP1BP46821 2468 aaKnown RBP3.65□□□□□ -1.82
VTI1BP4-201ENST00000427516 COL6A3P12111 3177 aa3.65□□□□□ -1.83
VTI1BP4-201ENST00000427516 A8MWP4 228 aa3.65□□□□□ -1.83
VTI1BP4-201ENST00000427516 H0Y9J4 135 aa3.65□□□□□ -1.83
VTI1BP4-201ENST00000427516 WFDC13Q8IUB5 93 aa3.65□□□□□ -1.83
VTI1BP4-201ENST00000427516 PRR26Q8N8Z3 221 aa3.65□□□□□ -1.83
VTI1BP4-201ENST00000427516 Q8NDZ9 215 aa3.65□□□□□ -1.83
VTI1BP4-201ENST00000427516 CCL19Q99731 98 aa3.65□□□□□ -1.83
VTI1BP4-201ENST00000427516 XAGE1AQ9HD64 81 aa3.65□□□□□ -1.83
VTI1BP4-201ENST00000427516 SPTBN2O15020 2390 aa3.65□□□□□ -1.83
VTI1BP4-201ENST00000427516 SDK1Q7Z5N4 2213 aa3.64□□□□□ -1.83
VTI1BP4-201ENST00000427516 MKI67P46013 3256 aaKnown RBP3.64□□□□□ -1.83
VTI1BP4-201ENST00000427516 LAMA2P24043 3122 aaKnown RBP3.64□□□□□ -1.83
VTI1BP4-201ENST00000427516 TNRC18O15417 2968 aaPredicted RBP3.64□□□□□ -1.83
VTI1BP4-201ENST00000427516 IGLV8-61A0A075B6I0 122 aa3.64□□□□□ -1.83
VTI1BP4-201ENST00000427516 IGLV10-54A0A075B6I4 117 aa3.64□□□□□ -1.83
VTI1BP4-201ENST00000427516 IGLV5-37A0A075B6J1 123 aa3.64□□□□□ -1.83
VTI1BP4-201ENST00000427516 KRTAP29-1A8MX34 341 aaPredicted RBP3.64□□□□□ -1.83
VTI1BP4-201ENST00000427516 DEFB130BP0DP73 79 aa3.64□□□□□ -1.83
VTI1BP4-201ENST00000427516 DEFB130AP0DP74 79 aa3.64□□□□□ -1.83
VTI1BP4-201ENST00000427516 SPAG11AQ6PDA7 123 aa3.64□□□□□ -1.83
VTI1BP4-201ENST00000427516 Q6YL49 198 aa3.64□□□□□ -1.83
VTI1BP4-201ENST00000427516 NBEAQ8NFP9 2946 aa3.64□□□□□ -1.83
VTI1BP4-201ENST00000427516 CSNK1G2-AS1Q8NCQ2 148 aa3.63□□□□□ -1.83
VTI1BP4-201ENST00000427516 WWC2-AS2Q96NR7 200 aa3.63□□□□□ -1.83
VTI1BP4-201ENST00000427516 PKDREJQ9NTG1 2253 aa3.63□□□□□ -1.83
VTI1BP4-201ENST00000427516 PRB2P02812 416 aaPredicted RBP3.62□□□□□ -1.83
VTI1BP4-201ENST00000427516 TLX1NBP0CAT3 122 aa3.62□□□□□ -1.83
VTI1BP4-201ENST00000427516 Q8N1X5 172 aa3.62□□□□□ -1.83
VTI1BP4-201ENST00000427516 CEP250Q9BV73 2442 aa3.62□□□□□ -1.83
VTI1BP4-201ENST00000427516 VPS13AQ96RL7 3174 aa3.61□□□□□ -1.83
VTI1BP4-201ENST00000427516 PIEZO2Q9H5I5 2752 aa3.61□□□□□ -1.83
VTI1BP4-201ENST00000427516 A8MU10 97 aa3.61□□□□□ -1.83
VTI1BP4-201ENST00000427516 UQCR11O14957 56 aa3.61□□□□□ -1.83
VTI1BP4-201ENST00000427516 FSHBP01225 129 aa3.61□□□□□ -1.83
VTI1BP4-201ENST00000427516 ACYP2P14621 99 aa3.61□□□□□ -1.83
VTI1BP4-201ENST00000427516 SPRR1AP35321 89 aa3.61□□□□□ -1.83
VTI1BP4-201ENST00000427516 DEFB136Q30KP8 78 aa3.61□□□□□ -1.83
VTI1BP4-201ENST00000427516 TPRP12270 2363 aaKnown RBP3.61□□□□□ -1.83
VTI1BP4-201ENST00000427516 LAMA1P25391 3075 aa3.6□□□□□ -1.83
VTI1BP4-201ENST00000427516 ANKHD1Q8IWZ3 2542 aaKnown RBP3.6□□□□□ -1.83
VTI1BP4-201ENST00000427516 NOTCH2NLQ7Z3S9 236 aa3.6□□□□□ -1.83
VTI1BP4-201ENST00000427516 C7orf33Q8WU49 177 aa3.6□□□□□ -1.83
VTI1BP4-201ENST00000427516 LINC00476Q8WZB0 136 aa3.6□□□□□ -1.83
VTI1BP4-201ENST00000427516 SPTBN1Q01082 2364 aaKnown RBP3.6□□□□□ -1.83
VTI1BP4-201ENST00000427516 A0A1B0GU69 56 aa3.59□□□□□ -1.83
VTI1BP4-201ENST00000427516 DNAJC9-AS1A6NH13 148 aa3.59□□□□□ -1.83
VTI1BP4-201ENST00000427516 H3BNG1 76 aa3.59□□□□□ -1.83
VTI1BP4-201ENST00000427516 RTL8CO15255 209 aa3.59□□□□□ -1.83
VTI1BP4-201ENST00000427516 SPINK7P58062 85 aa3.59□□□□□ -1.83
VTI1BP4-201ENST00000427516 SPATA8Q6RVD6 105 aa3.59□□□□□ -1.83
VTI1BP4-201ENST00000427516 C10orf99Q6UWK7 81 aa3.59□□□□□ -1.83
VTI1BP4-201ENST00000427516 Q6ZR54 194 aa3.59□□□□□ -1.83
VTI1BP4-201ENST00000427516 FRYQ5TBA9 3013 aa3.58□□□□□ -1.84
VTI1BP4-201ENST00000427516 TECTAO75443 2155 aa3.58□□□□□ -1.84
VTI1BP4-201ENST00000427516 IGLV1-50A0A075B6I6 118 aa3.58□□□□□ -1.84
VTI1BP4-201ENST00000427516 A0A087WSZ3 146 aa3.58□□□□□ -1.84
VTI1BP4-201ENST00000427516 CDK2AP2O75956 126 aa3.58□□□□□ -1.84
VTI1BP4-201ENST00000427516 IGLV1-51P01701 117 aa3.58□□□□□ -1.84
VTI1BP4-201ENST00000427516 GIG44P09565 113 aaPredicted RBP3.58□□□□□ -1.84
VTI1BP4-201ENST00000427516 C18orf65Q6ZTR6 163 aa3.58□□□□□ -1.84
VTI1BP4-201ENST00000427516 MED13LQ71F56 2210 aa3.58□□□□□ -1.84
VTI1BP4-201ENST00000427516 ROS1P08922 2347 aa3.57□□□□□ -1.84
VTI1BP4-201ENST00000427516 SPART-AS1P0CW21 52 aa3.57□□□□□ -1.84
VTI1BP4-201ENST00000427516 RPL37AP61513 92 aaKnown RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms